Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3e20
         (211 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RME5 Cluster: Predicted protein; n=1; Nematostella ve...    62   2e-09
UniRef50_A5AGR5 Cluster: Putative uncharacterized protein; n=1; ...    44   7e-04
UniRef50_Q7RPR4 Cluster: Putative uncharacterized protein PY0139...    44   7e-04
UniRef50_Q4XSX0 Cluster: Putative uncharacterized protein; n=1; ...    42   0.002
UniRef50_Q4X7X8 Cluster: Putative uncharacterized protein; n=1; ...    40   0.008
UniRef50_Q8SUR9 Cluster: Zinc finger C2H2 protein ECU08_0560; n=...    32   2.2  
UniRef50_A2Q271 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  

>UniRef50_A7RME5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 404

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = +3

Query: 18  TYTKIGTIQRRLAWPLRKDDTQNREAFHIF 107
           TYTKIGTIQRRLAWPLRKDDTQ REAF IF
Sbjct: 206 TYTKIGTIQRRLAWPLRKDDTQIREAFQIF 235


>UniRef50_A5AGR5 Cluster: Putative uncharacterized protein; n=1;
          Vitis vinifera|Rep: Putative uncharacterized protein -
          Vitis vinifera (Grape)
          Length = 377

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -1

Query: 82 CVSSLRRGHANLLCIVPIL 26
          CVSSLRRGHANLLCIVPIL
Sbjct: 41 CVSSLRRGHANLLCIVPIL 59



 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -1

Query: 82  CVSSLRRGHANLLCIVPIL 26
           CVSSLRRGHANLLCIVPIL
Sbjct: 140 CVSSLRRGHANLLCIVPIL 158



 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = -1

Query: 82  CVSSLRRGHANLLCIVPIL 26
           CVSSLRRGHANLLCIVPIL
Sbjct: 239 CVSSLRRGHANLLCIVPIL 257


>UniRef50_Q7RPR4 Cluster: Putative uncharacterized protein
          PY01392; n=1; Plasmodium yoelii yoelii|Rep: Putative
          uncharacterized protein PY01392 - Plasmodium yoelii
          yoelii
          Length = 37

 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = +3

Query: 21 YTKIGTIQRRLAWPLRKDDT 80
          + KIGTIQRRLAWPLRKDDT
Sbjct: 18 FAKIGTIQRRLAWPLRKDDT 37


>UniRef50_Q4XSX0 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium chabaudi|Rep: Putative uncharacterized
          protein - Plasmodium chabaudi
          Length = 44

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = -2

Query: 78 CHPCAGAMLIFSVSFQF 28
          CHPCAGAMLIFSVSFQF
Sbjct: 2  CHPCAGAMLIFSVSFQF 18


>UniRef50_Q4X7X8 Cluster: Putative uncharacterized protein; n=1;
          Plasmodium chabaudi|Rep: Putative uncharacterized
          protein - Plasmodium chabaudi
          Length = 62

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = -1

Query: 79 VSSLRRGHANLLCIVPIL 26
          VSSLRRGHANLLCIVPIL
Sbjct: 36 VSSLRRGHANLLCIVPIL 53


>UniRef50_Q8SUR9 Cluster: Zinc finger C2H2 protein ECU08_0560; n=1;
           Encephalitozoon cuniculi|Rep: Zinc finger C2H2 protein
           ECU08_0560 - Encephalitozoon cuniculi
          Length = 449

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = -2

Query: 93  LHDFACHPCAGAMLIFSVSFQ 31
           L  + C P AGAMLIFSV FQ
Sbjct: 62  LSSYTCRPYAGAMLIFSVLFQ 82


>UniRef50_A2Q271 Cluster: Putative uncharacterized protein; n=1;
           Medicago truncatula|Rep: Putative uncharacterized
           protein - Medicago truncatula (Barrel medic)
          Length = 69

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 18  TYTKIGTIQRRLAWPLRKDDT-QNREAFHI 104
           T  KI TI RRL W L KDDT Q+R   +I
Sbjct: 25  TSDKIKTIHRRLTWLLHKDDTHQSRNGPNI 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,450,262
Number of Sequences: 1657284
Number of extensions: 1009213
Number of successful extensions: 2470
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2470
length of database: 575,637,011
effective HSP length: 48
effective length of database: 496,087,379
effective search space used: 10417834959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)