Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3e13
(749 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 26 0.28
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 2.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 2.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive pep... 21 8.0
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 8.0
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 8.0
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 254 LVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 367
L + ++ VYP+ C + E++ SD P +P G
Sbjct: 182 LETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 284 YPHP--APEGCTSASSESAPSDQPIYPDTG 367
YP+P +PE A+S PS P+ P G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +2
Query: 284 YPHP--APEGCTSASSESAPSDQPIYPDTG 367
YP+P +PE A+S PS P+ P G
Sbjct: 64 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 689 VYKCPEAGFALDNAVW 642
+ CP AG +D+ VW
Sbjct: 529 IVHCPFAGHPVDSVVW 544
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 236 ALTNGKVLWPLLEER 192
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 236 ALTNGKVLWPLLEER 192
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 236 ALTNGKVLWPLLEER 192
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 236 ALTNGKVLWPLLEER 192
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>EF222291-1|ABN79651.1| 374|Tribolium castaneum cardioactive
peptide receptor 1 protein.
Length = 374
Score = 21.4 bits (43), Expect = 8.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 603 VLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESG 734
VLF+ + +GV Y ++ G+SR + + T LAL ++ G
Sbjct: 33 VLFVIIVAGNVGVLYTLLFGRSRKSRMNY--FITHLALADLSVG 74
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 317 ASSESAPSDQPIYPD 361
ASS APS P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +2
Query: 503 QHHPIRHKHSHQVSREEEGA 562
QHH H+ H + ++GA
Sbjct: 177 QHHQPHHQQQHMMYGGQQGA 196
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +2
Query: 503 QHHPIRHKHSHQVSREEEGA 562
QHH H+ H + ++GA
Sbjct: 179 QHHQPHHQQQHMMYGGQQGA 198
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,125
Number of Sequences: 336
Number of extensions: 3243
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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