Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3e02
(691 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 26 0.33
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 26 0.33
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 24 1.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.3
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 22 5.4
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 22 5.4
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 7.2
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 21 9.5
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 21 9.5
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 21 9.5
AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein. 21 9.5
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 25.8 bits (54), Expect = 0.33
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 649 RRAGMATNSRLPSPINFLASHRKGF 575
+RAG T S + P+ + HR GF
Sbjct: 183 KRAGPRTESAVYEPVRIMGVHRPGF 207
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 25.8 bits (54), Expect = 0.33
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 533 QILFSVENNSFRLNFSVFNIHFV 465
+I SFR+NF++FN++ V
Sbjct: 103 EIFNCCSKKSFRMNFAIFNLYMV 125
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 388 LRTKMYLTGIEIWSVYVKVSLLSCAGTKWILK 483
+ T Y+TGI +W + + + + A K+ K
Sbjct: 123 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 154
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 388 LRTKMYLTGIEIWSVYVKVSLLSCAGTKWILK 483
+ T Y+TGI +W + + + + A K+ K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 388 LRTKMYLTGIEIWSVYVKVSLLSCAGTKWILK 483
+ T Y+TGI +W + + + + A K+ K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 349 DNVLSSCST*PLELRTKMYL 408
D L+S P+++RTK+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 349 DNVLSSCST*PLELRTKMYL 408
D L+S P+++RTK+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = -3
Query: 173 CFASTTISYQYTLECGHIICHFRCFIAILLRDCIRKSRFNSFQSKV 36
CF S ++ + I C F I + + RK R N S +
Sbjct: 63 CFNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNI 108
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 313 FSCPAVSHTLKRIGPRF 263
F CP V+ T+ PR+
Sbjct: 170 FECPKVNETVAATHPRY 186
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 126 AYHLPFSLFYCYFT 85
A L F LFYCY T
Sbjct: 12 AVFLLFYLFYCYKT 25
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 126 AYHLPFSLFYCYFT 85
A L F LFYCY T
Sbjct: 12 AVFLLFYLFYCYKT 25
>AF225975-1|AAF74117.1| 256|Tribolium castaneum unknown protein.
Length = 256
Score = 21.0 bits (42), Expect = 9.5
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = -2
Query: 321 HQTSLVRLCPTH*NELARGSYGILEDVLRHPESQR 217
HQT + P N SY + + HPE+++
Sbjct: 47 HQTVIYHNNPRDPNRARSVSYSTVIQSVPHPETEK 81
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,338
Number of Sequences: 336
Number of extensions: 4020
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -