Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3d22
         (210 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   4.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   5.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    18   9.5  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    18   9.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 139 ICLMSLYLNLXFXDRYXTQKTTFW 68
           I L ++Y NL         K+ FW
Sbjct: 81  IFLFAIYTNLSILTTVTIFKSAFW 104


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 52   IMFLNTRKSFFEXCIYQXXVNLNIVT*G 135
            I++L +  S +   I    +NLN+V+ G
Sbjct: 1033 IIYLLSIPSMYLLLILYSIINLNVVSWG 1060


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 52   IMFLNTRKSFFEXCIYQXXVNLNIVT*G 135
            I++L +  S +   I    +NLN+V+ G
Sbjct: 1033 IIYLLSIPSMYLLLILYSIINLNVVSWG 1060


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 52   IMFLNTRKSFFEXCIYQXXVNLNIVT*G 135
            I++L +  S +   I    +NLN+V+ G
Sbjct: 1033 IIYLLSIPSMYLLLILYSIINLNVVSWG 1060


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 52   IMFLNTRKSFFEXCIYQXXVNLNIVT*G 135
            I++L +  S +   I    +NLN+V+ G
Sbjct: 1033 IIYLLSIPSMYLLLILYSIINLNVVSWG 1060


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -2

Query: 74  FLVFKNIITELLYWXKTINRIIE 6
           F+V   ++ ++ YW   I  I E
Sbjct: 96  FIVPSGVVYKIGYWLHQICHICE 118


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +3

Query: 51  YNVFKHQKVVF*VMYLSXKXKFKYSDMR 134
           YN  +  ++   V +   + KF+ S +R
Sbjct: 291 YNTVEESRIFGLVTFTPDRSKFRPSSLR 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,997
Number of Sequences: 336
Number of extensions: 407
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used:  2579160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)