BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3d18
(508 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 27 0.36
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 27 0.48
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 25 1.9
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 24 3.4
AF457547-1|AAL68777.1| 163|Anopheles gambiae selenoprotein prot... 24 3.4
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 23 5.9
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 23 5.9
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 27.1 bits (57), Expect = 0.36
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 86 EHDILEAAEHAMSTCDVCLVVGTSSVVYPAAMFAPQAASRGAIVAEFN 229
E+D+L+AA M+ C+V + + P A+ EFN
Sbjct: 272 EYDVLQAAAAKMTVCEVAVEPPAMTTTTTTTTTTPTTATACPSTTEFN 319
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 26.6 bits (56), Expect = 0.48
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -1
Query: 298 WQCCTTRSFEVKMEIRCGRCWFYIKFCYNCTPRSCLRSKHC 176
W C+ R E ++++C +CW + CT + RSK C
Sbjct: 316 WCVCSLR--EATVQVKCFKCWKLGHKGFECTGQD--RSKLC 352
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 24.6 bits (51), Expect = 1.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 298 WQCCTTRSFEVKMEIRCGRCWFYIKFCYNC 209
W C R EV E +C +CW Y+C
Sbjct: 263 WSICHIR--EVMEEQKCYKCWKVGHTSYHC 290
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.8 bits (49), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -2
Query: 216 TIAPLE-AACGANIAAGYTTDDVPTT 142
T+AP+ AA A AAG + DVP+T
Sbjct: 1125 TLAPVAMAAAAAAAAAGASNVDVPST 1150
>AF457547-1|AAL68777.1| 163|Anopheles gambiae selenoprotein
protein.
Length = 163
Score = 23.8 bits (49), Expect = 3.4
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +2
Query: 86 EHDILEAAEHAMSTCDVCLVVGTSSVVYPAAMFAPQAASRGA 211
++ ++E EH + C + VYPAA+ GA
Sbjct: 46 DYGLIELKEHCLECCQKDTEADSKLKVYPAAVLEVCTCKFGA 87
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 23.0 bits (47), Expect = 5.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 160 SGISCGNVCSASSFEGCNCSR 222
SGIS VC S + GC C R
Sbjct: 228 SGIST-EVCRRSCYCGCQCRR 247
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.0 bits (47), Expect = 5.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 241 CWFYIKFCYNCTPRSC 194
C+++ CY+C P C
Sbjct: 7 CFYFRYKCYSCEPPDC 22
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,030
Number of Sequences: 2352
Number of extensions: 10366
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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