Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3d16
(800 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;... 278 1e-73
UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14; Nucleopolyhedr... 184 2e-45
UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep: ... 177 2e-43
UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear ... 165 2e-39
UniRef50_O10350 Cluster: Uncharacterized 6.7 kDa protein; n=12; ... 91 2e-17
UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;... 90 7e-17
UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum granuloviru... 77 4e-13
UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -... 73 6e-12
UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:... 65 2e-09
UniRef50_Q8JS09 Cluster: Putative uncharacterized protein PhopGV... 56 8e-07
UniRef50_Q80LL5 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_Q287K5 Cluster: ORF-67; n=5; Nucleopolyhedrovirus|Rep: ... 47 5e-04
UniRef50_Q8V5R1 Cluster: ORF96; n=3; Nucleopolyhedrovirus|Rep: O... 40 0.073
UniRef50_Q6JK90 Cluster: Putative uncharacterized protein; n=3; ... 40 0.073
UniRef50_Q91BD2 Cluster: Putative uncharacterized protein; n=1; ... 39 0.17
UniRef50_Q9DVZ1 Cluster: PxORF41 peptide; n=1; Plutella xylostel... 36 0.90
UniRef50_A7E511 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q4KSY2 Cluster: ORF-98 peptide; n=6; Nucleopolyhedrovir... 34 4.8
UniRef50_Q7QQJ3 Cluster: GLP_238_5046_9479; n=1; Giardia lamblia... 34 4.8
UniRef50_Q4UAK5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.8
UniRef50_A0CSZ2 Cluster: Chromosome undetermined scaffold_261, w... 34 4.8
>UniRef50_O10348 Cluster: Uncharacterized 44.3 kDa protein; n=14;
Nucleopolyhedrovirus|Rep: Uncharacterized 44.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 390
Score = 278 bits (682), Expect = 1e-73
Identities = 127/192 (66%), Positives = 149/192 (77%), Gaps = 4/192 (2%)
Frame = +1
Query: 217 MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNS 396
MECPFQI+VC+SDRFFAFP+NLVEPQ+ VGN+ ENL+VYVPTD D LY++K+ FP+F S
Sbjct: 1 MECPFQIKVCVSDRFFAFPYNLVEPQTAVGNRPTENLVVYVPTDADVLYVEKRNFPRFRS 60
Query: 397 VLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMI 576
VLVY+HE D N +S+SPKKT +ATIVYWNPL+PITEIGAGETRVFSVLLTNNLFYCNT+I
Sbjct: 61 VLVYKHEQDYNGNSQSPKKTGAATIVYWNPLVPITEIGAGETRVFSVLLTNNLFYCNTLI 120
Query: 577 IQHENPKCPIEFTYPETDMQSACSALLKNRNGQSV----PPPIKSNLRPIACEIPLSHFK 744
+ HENP CPIEFTYP +MQ C L R + PP S LRPI CE+PL+HFK
Sbjct: 121 VHHENPTCPIEFTYPGLEMQPVCKLLSGARKSVDMRAHAPPLSYSELRPINCELPLAHFK 180
Query: 745 ELVGKQ*LFIMF 780
EL + F
Sbjct: 181 ELTESDKFLLCF 192
>UniRef50_Q9YMM0 Cluster: LdOrf-107 peptide; n=14;
Nucleopolyhedrovirus|Rep: LdOrf-107 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 366
Score = 184 bits (449), Expect = 2e-45
Identities = 80/130 (61%), Positives = 100/130 (76%)
Frame = +1
Query: 223 CPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVL 402
CP I+VCISD F AFP+ V PQ+DVGN L+ NL+VYVPTD+D Y+D + P F SVL
Sbjct: 12 CPLNIKVCISDYFVAFPYEYVVPQNDVGNALVLNLVVYVPTDEDIRYVDASKLPAFQSVL 71
Query: 403 VYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQ 582
VYRHE ++R PKK +AT+VYWNP++PI E+G G+TRVFSVLLTN+LF+CNTMII
Sbjct: 72 VYRHELGDASETRVPKKNTNATVVYWNPILPIGEVGVGDTRVFSVLLTNDLFFCNTMIIG 131
Query: 583 HENPKCPIEF 612
H+ CP+EF
Sbjct: 132 HDIVSCPVEF 141
>UniRef50_Q287K6 Cluster: ORF-66; n=4; Nucleopolyhedrovirus|Rep:
ORF-66 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 356
Score = 177 bits (432), Expect = 2e-43
Identities = 75/131 (57%), Positives = 98/131 (74%)
Frame = +1
Query: 217 MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNS 396
M CPF I V ISDR+FAFP+N V PQ D+G + NL+VYVPT++D ++DK F F+S
Sbjct: 1 MTCPFNISVHISDRYFAFPYNRVRPQKDLGGAYVRNLVVYVPTEEDIKFVDKTYFNDFSS 60
Query: 397 VLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMI 576
VLV+RHE ++SR+P K + TIVYWNP++PITEIG GET V+SVLLT++LFYC TM+
Sbjct: 61 VLVHRHEWSERVESRAPTKNGAVTIVYWNPILPITEIGVGETCVYSVLLTDSLFYCKTMV 120
Query: 577 IQHENPKCPIE 609
+ P CPI+
Sbjct: 121 VDSNTPMCPIQ 131
>UniRef50_Q0IL08 Cluster: ORF111; n=2; Leucania separata nuclear
polyhedrosis virus|Rep: ORF111 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 364
Score = 165 bits (400), Expect = 2e-39
Identities = 71/134 (52%), Positives = 102/134 (76%), Gaps = 2/134 (1%)
Frame = +1
Query: 217 MECPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPK--F 390
M CP I+V IS++F FP PQ+DV N + NLIVYVPT++D +++++Q F
Sbjct: 1 MACPVNIKVYISEQFVTFPFQFAIPQADVANVPVRNLIVYVPTEEDVQFVEREQLLNTVF 60
Query: 391 NSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNT 570
++VLVYRHE+ I++R+P+K +ATIVYWNP+MPITE+G G+TRVFS+LLTNNL+ CNT
Sbjct: 61 DTVLVYRHENVGAIEARAPRKNQNATIVYWNPVMPITEVGVGDTRVFSILLTNNLYSCNT 120
Query: 571 MIIQHENPKCPIEF 612
+++ ++ P CPIE+
Sbjct: 121 IVLDNDTPLCPIEY 134
>UniRef50_O10350 Cluster: Uncharacterized 6.7 kDa protein; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 6.7 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 56
Score = 91.5 bits (217), Expect = 2e-17
Identities = 38/53 (71%), Positives = 47/53 (88%)
Frame = +2
Query: 14 MKYFLSAIFLIIVFMYAMYFCISIVVNNGRVQRDLFYHYNYVPDTLLNTVRVH 172
MKYFLSA FLII+F+YA+YFC+ I+VNN RV+R+LFY YNY+P LL+TVRVH
Sbjct: 1 MKYFLSATFLIIIFLYAIYFCVFIIVNNARVRRNLFYQYNYIPAALLSTVRVH 53
>UniRef50_A5IZP8 Cluster: Putative uncharacterized protein orf46;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf46 - Spodoptera litura
granulovirus
Length = 358
Score = 89.8 bits (213), Expect = 7e-17
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Frame = +1
Query: 217 MECPFQIQVCISDRFFAFPHNLVE--PQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKF 390
M CPF I+V ISD F FP++++ P G+ + +L +YVP+ +D I+K ++
Sbjct: 1 MSCPFNIKVYISDAFVVFPYDMISTIPMDVGGSASVTDLTIYVPSYEDIAVINKDTIQRY 60
Query: 391 NSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNT 570
+ +H + D+ KT + IVYWN + IT G G T+VFSV+L++NLF C
Sbjct: 61 GYTDIKVKKHVNHTDA---DKTPTRIIVYWNVISLITVTGVGVTKVFSVVLSDNLFECGQ 117
Query: 571 MII--QHENPKCPIEFTYPETDMQSACSALLKNR-NGQSV 681
+ + + CP++ Y +SA +L+ G SV
Sbjct: 118 LNVLDTQGDLNCPLQIDYAFFPTESANRTILRGEYAGDSV 157
>UniRef50_Q9PYZ0 Cluster: ORF53; n=1; Xestia c-nigrum
granulovirus|Rep: ORF53 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 353
Score = 77.4 bits (182), Expect = 4e-13
Identities = 45/149 (30%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Frame = +1
Query: 217 MECPFQIQVCISDRFFAFPHNLVE-PQSDVGNK-LIENLIVYVPTDDDRLYIDKK--QFP 384
M CP ++V I+D + FP+ ++ P D G + + +YVPT +D ++K Q
Sbjct: 1 MSCPANVKVFIADYYVTFPYESIQNPPRDAGGAGTVTAITIYVPTFEDVHAVNKSLVQRK 60
Query: 385 KFNSVLVYRHE-HDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFY 561
+ V V +H D +D + +VYWN + I ++G G T+V++V+L++NL+
Sbjct: 61 GYTDVRVEKHTAQDTTVDE-------ARVVVYWNVISHIKKLGYGTTQVYNVVLSDNLYT 113
Query: 562 CNTMIIQHENP-KCPIEFTYPETDMQSAC 645
C+ + I P CP+ Y D +S C
Sbjct: 114 CDNVTITSLMPTSCPMHIEYCAVDAKSQC 142
>UniRef50_Q7T9W9 Cluster: ORF_46; n=5; Granulovirus|Rep: ORF_46 -
Adoxophyes orana granulovirus (AoGV)
Length = 349
Score = 73.3 bits (172), Expect = 6e-12
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = +1
Query: 223 CPFQIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFP-KFNSV 399
C I+V ++D F FP+ ++ + L V+VPT D IDK +F F V
Sbjct: 4 CSNNIRVYVNDSFVYFPYERIKRNPNY------YLTVFVPTYADEEVIDKSRFTGMFKIV 57
Query: 400 LVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMII 579
V ++ N D + +VYWN ++PI +G G T V++V+L++NL+ CN ++I
Sbjct: 58 NVIKYVS--NFDESKYSSVSKNLVVYWNVIVPINILGVGTTDVYNVVLSDNLYKCNNIVI 115
Query: 580 QHEN-PKCPIEFTY 618
++ CP++ Y
Sbjct: 116 ENTTFVNCPLQVDY 129
>UniRef50_Q9DVY9 Cluster: PxORF43 peptide; n=2; Granulovirus|Rep:
PxORF43 peptide - Plutella xylostella granulovirus
Length = 414
Score = 65.3 bits (152), Expect = 2e-09
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Frame = +1
Query: 232 QIQVCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPK--FNSVLV 405
+I V +SD F FP++LV V L+VYVPT +D + K+ K + V V
Sbjct: 72 KIHVHVSDSFVNFPYSLV-----VAKPPTSRLVVYVPTFEDERAVSKRILNKQGYAEVEV 126
Query: 406 YRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNTMIIQH 585
+H + D T + +VYWN + IT GAG T V++V+L++N++ C + +
Sbjct: 127 LKHVSNFLQDV-----TDESQVVYWNCIGTITRTGAGITHVYTVVLSDNVYDCQKIEVAT 181
Query: 586 E--NPKCPIEFTY 618
P CP++ Y
Sbjct: 182 SITRPLCPLQVDY 194
>UniRef50_Q8JS09 Cluster: Putative uncharacterized protein
PhopGV050; n=1; Phthorimaea operculella
granulovirus|Rep: Putative uncharacterized protein
PhopGV050 - Phthorimaea operculella granulovirus
Length = 339
Score = 56.4 bits (130), Expect = 8e-07
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Frame = +1
Query: 241 VCISDRFFAFPHNLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEH 420
+ +SD F FP+ +V+ +S++ L ++VPT +D I+ ++ F V V ++
Sbjct: 5 ITVSDAFVIFPYAMVQKKSNL-------LTIFVPTYEDESAIEIQRLT-FEVVRVKKYVS 56
Query: 421 DVNIDSRSPKKTASATIVYWNPLMPI-TEIGAGETRVFSVLLTNNLF---YCNTMIIQHE 588
N D + T + IVYWN ++PI T T VF+V+ ++NL+ + ++
Sbjct: 57 --NFDENND--TENGQIVYWNVIVPIKTFSKISNTYVFNVVFSDNLYNIPNAHIDVVDSI 112
Query: 589 NPKCPIEFTYPETDM---QSACSALLKNRN 669
N +CP++ Y T M + C+ L + R+
Sbjct: 113 NMRCPLQINYNPTKMVYLEGECAGLSQTRD 142
>UniRef50_Q80LL5 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 55
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/46 (45%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +2
Query: 35 IFLIIVFMYAMYFCISIVVNNGRVQRDLFYH-YNYVPDTLLNTVRV 169
+ ++++F+Y++ F ISI++NN R D Y YNY+P+TLL+TV+V
Sbjct: 7 VLMLLLFVYSI-FIISILINNKRNIHDTIYRQYNYIPETLLSTVKV 51
>UniRef50_Q287K5 Cluster: ORF-67; n=5; Nucleopolyhedrovirus|Rep:
ORF-67 - Agrotis segetum nuclear polyhedrosis virus
(AsNPV)
Length = 59
Score = 47.2 bits (107), Expect = 5e-04
Identities = 16/46 (34%), Positives = 33/46 (71%)
Frame = +2
Query: 35 IFLIIVFMYAMYFCISIVVNNGRVQRDLFYHYNYVPDTLLNTVRVH 172
+ +++VF ++ I++ +N ++Q L+Y YNY+P++LL+ V+VH
Sbjct: 6 VLMVVVFAVGVFILITLRLNKFQLQELLYYQYNYIPESLLSVVKVH 51
>UniRef50_Q8V5R1 Cluster: ORF96; n=3; Nucleopolyhedrovirus|Rep:
ORF96 - Helicoverpa zea SNPV
Length = 58
Score = 39.9 bits (89), Expect = 0.073
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 32 AIFLIIVFMYAMYFCISIVVNNGRVQRDLFYHYNYVPDTLLNTVRVH 172
A+F+++ F++A+ + N ++R L+Y Y Y+P+ L++ V VH
Sbjct: 6 AVFILLSFIFALGALYLLRQNKRDLRRQLYYQYKYIPEPLVSLVTVH 52
>UniRef50_Q6JK90 Cluster: Putative uncharacterized protein; n=3;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Neodiprion sertifer NPV
Length = 357
Score = 39.9 bits (89), Expect = 0.073
Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 4/133 (3%)
Frame = +1
Query: 223 CPFQIQVCISDRFFAFPHNLVEPQSD----VGNKLIENLIVYVPTDDDRLYIDKKQFPKF 390
C QV ISD + NL+ +++ K L V V ++D I Q F
Sbjct: 4 CSHLDQVIISDEYLFPSKNLIVREAENLPITIPKSTSILCVIVSIEEDIEIIGDVQ-TGF 62
Query: 391 NSVLVYRHEHDVNIDSRSPKKTASATIVYWNPLMPITEIGAGETRVFSVLLTNNLFYCNT 570
+ L+ D +D+ +VY P+ PIT G T VFS LTN L+ C +
Sbjct: 63 SETLITTQHDDGVLDN--------VVVVYLTPIQPITTYGILGTFVFSGFLTNFLYDCKS 114
Query: 571 MIIQHENPKCPIE 609
+ + CP++
Sbjct: 115 AFLFKKMIFCPVQ 127
>UniRef50_Q91BD2 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 55
Score = 38.7 bits (86), Expect = 0.17
Identities = 16/52 (30%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +2
Query: 26 LSAIFLIIVFMYAMYFCISIVV---NNGRVQRDLFYHYNYVPDTLLNTVRVH 172
++AI++++V + + F + V N V++ L+Y YNY+P L++ V+V+
Sbjct: 1 MTAIYIVLVIVLTVCFVTMLFVLRTNRRHVEKILYYQYNYIPKPLISLVKVY 52
>UniRef50_Q9DVZ1 Cluster: PxORF41 peptide; n=1; Plutella xylostella
granulovirus|Rep: PxORF41 peptide - Plutella xylostella
granulovirus
Length = 53
Score = 36.3 bits (80), Expect = 0.90
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 26 LSAIFLIIVFMYAMYFCISIVVNNGRVQRDLFYHYNYVPDTLLNTVRVH 172
L +FL IV + +Y + +N G++ R ++Y Y ++P+ L VRVH
Sbjct: 3 LPILFLSIVTVIILYI---LKLNRGQMNRLVYYKYKFIPEPLAKHVRVH 48
>UniRef50_A7E511 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 463
Score = 34.7 bits (76), Expect = 2.7
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 277 NLVEPQSDVGNKLIENLIVYVPTDDDRLYIDKKQFPKFNSVLVYRHEHDVNIDSRSPKKT 456
N++E Q + GN+LI++L++Y+ T ++ L + + K +D ++D +K+
Sbjct: 13 NILEAQRETGNELIKDLLIYIETVENNLRHENDRLTK--------ELNDAHLDLDDSRKS 64
Query: 457 ASATIVYWN 483
++WN
Sbjct: 65 RRELQIHWN 73
>UniRef50_Q4KSY2 Cluster: ORF-98 peptide; n=6;
Nucleopolyhedrovirus|Rep: ORF-98 peptide - Chrysodeixis
chalcites nucleopolyhedrovirus
Length = 61
Score = 33.9 bits (74), Expect = 4.8
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +2
Query: 41 LIIVFMYAMYFCISIVVNNGRVQRDLFYHYNYVPDTLLNTVRV 169
L++VF+ + + + VN ++++ L+Y Y Y+P L+ V+V
Sbjct: 8 LVVVFVVFLTVLVILSVNKIQLRQMLYYQYKYIPKPLIRFVKV 50
>UniRef50_Q7QQJ3 Cluster: GLP_238_5046_9479; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_238_5046_9479 - Giardia lamblia ATCC
50803
Length = 1477
Score = 33.9 bits (74), Expect = 4.8
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -1
Query: 467 VADAVFFGDRLSILTSCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIKFSINLLP 303
+A +FFG+ LS LT CL +T + G+ N SS + TY IK ++++ P
Sbjct: 465 LAHDIFFGNELSSLTQDKCLQYATAVVLGHYPAHRANYSSDL-TYFIKSAMSVCP 518
>UniRef50_Q4UAK5 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 1166
Score = 33.9 bits (74), Expect = 4.8
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Frame = +2
Query: 20 YFLSAIFLIIV--------FMYAMYFCISIVVNNGRVQRDLFYHYNYVPDTLLNTV 163
+F+ IF++I+ F+ +F I +++ N R QRD+F HY+ + + +N +
Sbjct: 38 FFIGTIFILIIKNIIINNLFLTLQHFIIILLLINLRYQRDIFTHYSTIFNIFINNI 93
>UniRef50_A0CSZ2 Cluster: Chromosome undetermined scaffold_261, whole
genome shotgun sequence; n=11; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_261,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 3013
Score = 33.9 bits (74), Expect = 4.8
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -1
Query: 596 LGFSCWMIIVLQ*NKLLVRST-LKTRV-SPAPISVMGINGFQYTMVADAVFFGDRLSILT 423
LG SC LQ N L S LK + S S + NG Q + R+ I T
Sbjct: 861 LGNSCLCKTKLQGNYLTTYSAPLKINLFSVCHYSCLSCNGPQVNQCLSCLNSESRILIST 920
Query: 422 SCSCLYTSTELNFGNCFLSMYNRSSSVGTYTIKFSINLLPTS 297
SC C + ++N NC Y G T++ N P+S
Sbjct: 921 SCICTENTFDINVPNCQKCDYR---CEGCTTLRTQCNACPSS 959
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,746,863
Number of Sequences: 1657284
Number of extensions: 16149058
Number of successful extensions: 42416
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 40851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42401
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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