Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3d12
(771 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p pro... 332 4e-91
S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease r... 323 1e-88
AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA... 323 1e-88
AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p pro... 44 2e-04
AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-P... 44 2e-04
BT001859-1|AAN71622.1| 618|Drosophila melanogaster RH65876p pro... 29 5.3
AY051804-1|AAK93228.1| 637|Drosophila melanogaster LD31969p pro... 29 5.3
AE013599-2822|AAM68436.1| 592|Drosophila melanogaster CG15118-P... 29 5.3
AE013599-2821|AAM68435.1| 637|Drosophila melanogaster CG15118-P... 29 5.3
AE013599-2820|AAF57600.2| 637|Drosophila melanogaster CG15118-P... 29 5.3
AE013599-2819|AAG22258.2| 637|Drosophila melanogaster CG15118-P... 29 5.3
BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p pro... 29 7.1
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase... 29 7.1
AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA... 29 7.1
AE014297-858|AAF54325.2| 643|Drosophila melanogaster CG11984-PC... 29 7.1
AE014297-857|AAF54323.2| 643|Drosophila melanogaster CG11984-PB... 29 7.1
AE014297-856|AAF54324.2| 643|Drosophila melanogaster CG11984-PA... 29 7.1
BT024222-1|ABC86284.1| 599|Drosophila melanogaster LP17815p pro... 29 9.3
BT001502-1|AAN71257.1| 599|Drosophila melanogaster LD34776p pro... 29 9.3
BT001483-1|AAN71238.1| 599|Drosophila melanogaster LD22379p pro... 29 9.3
AY061066-1|AAL28614.1| 599|Drosophila melanogaster LD03515p pro... 29 9.3
>AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p
protein.
Length = 433
Score = 332 bits (815), Expect = 4e-91
Identities = 170/241 (70%), Positives = 190/241 (78%), Gaps = 2/241 (0%)
Frame = +1
Query: 55 KNTKMVLESTMIXVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN 234
KNTKMVLESTMI DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N
Sbjct: 34 KNTKMVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSN 93
Query: 235 -VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSP 411
VEVLATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP
Sbjct: 94 TVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSP 153
Query: 412 VNTDEKELVKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVP 591
+N +E +LVK AKRLKKEKVN D+VSFG+ NN +LT F+N LNGKD + GSHLVSVP
Sbjct: 154 INHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGT--GSHLVSVP 211
Query: 592 AGGCVVLSEALITS-XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSMEEQRQRQ 768
G VLS+AL++S FEFGVDPN DPELALALRVSMEEQRQRQ
Sbjct: 212 RGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQ 269
Query: 769 E 771
E
Sbjct: 270 E 270
>S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease
regulatory complexnon-ATPase subunit protein.
Length = 396
Score = 323 bits (794), Expect = 1e-88
Identities = 166/237 (70%), Positives = 186/237 (78%), Gaps = 2/237 (0%)
Frame = +1
Query: 67 MVLESTMIXVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 243
MVLESTMI DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMISFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 244 LATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTD 423
LATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +
Sbjct: 61 LATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHE 120
Query: 424 EKELVKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGC 603
E +LVK AKRLKKEKVN D+VSFG+ NN +LT F+N LNGKD + GSHLVSVP G
Sbjct: 121 EGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGS- 177
Query: 604 VVLSEALITS-XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSMEEQRQRQE 771
VLS+AL++S FEFGVDPN DPELALALRVSMEEQRQRQE
Sbjct: 178 -VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQE 233
>AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA
protein.
Length = 396
Score = 323 bits (794), Expect = 1e-88
Identities = 166/237 (70%), Positives = 186/237 (78%), Gaps = 2/237 (0%)
Frame = +1
Query: 67 MVLESTMIXVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 243
MVLESTMI DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 244 LATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTD 423
LATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +
Sbjct: 61 LATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHE 120
Query: 424 EKELVKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGC 603
E +LVK AKRLKKEKVN D+VSFG+ NN +LT F+N LNGKD + GSHLVSVP G
Sbjct: 121 EGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGS- 177
Query: 604 VVLSEALITS-XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSMEEQRQRQE 771
VLS+AL++S FEFGVDPN DPELALALRVSMEEQRQRQE
Sbjct: 178 -VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQE 233
>AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p
protein.
Length = 438
Score = 44.0 bits (99), Expect = 2e-04
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = +1
Query: 55 KNTKMVLESTMIXVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA- 231
+N ++ + +D S+ M D PTRL+ + L NP + +GL+ L
Sbjct: 55 QNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKA 114
Query: 232 -NVEVLATLTSDVG---RIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMR-IVV 396
E + LT + + L V + +L G+ +A +LK +H R IV+
Sbjct: 115 KRAEKVTELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLK--VVPSHASREIVI 172
Query: 397 FVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGED 501
+GS D ++ LKKE + C V+S +
Sbjct: 173 IMGSLTTCDPVDINLTIDELKKEGIRCSVISLSAE 207
>AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-PA
protein.
Length = 438
Score = 44.0 bits (99), Expect = 2e-04
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = +1
Query: 55 KNTKMVLESTMIXVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA- 231
+N ++ + +D S+ M D PTRL+ + L NP + +GL+ L
Sbjct: 55 QNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKA 114
Query: 232 -NVEVLATLTSDVG---RIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMR-IVV 396
E + LT + + L V + +L G+ +A +LK +H R IV+
Sbjct: 115 KRAEKVTELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLK--VVPSHASREIVI 172
Query: 397 FVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGED 501
+GS D ++ LKKE + C V+S +
Sbjct: 173 IMGSLTTCDPVDINLTIDELKKEGIRCSVISLSAE 207
>BT001859-1|AAN71622.1| 618|Drosophila melanogaster RH65876p
protein.
Length = 618
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 709 VDPELALALRVSMEEQRQ 762
VDP+LA+A+R+S +EQR+
Sbjct: 578 VDPDLAMAMRLSQQEQRK 595
>AY051804-1|AAK93228.1| 637|Drosophila melanogaster LD31969p
protein.
Length = 637
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 709 VDPELALALRVSMEEQRQ 762
VDP+LA+A+R+S +EQR+
Sbjct: 597 VDPDLAMAMRLSQQEQRK 614
>AE013599-2822|AAM68436.1| 592|Drosophila melanogaster CG15118-PD,
isoform D protein.
Length = 592
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 709 VDPELALALRVSMEEQRQ 762
VDP+LA+A+R+S +EQR+
Sbjct: 552 VDPDLAMAMRLSQQEQRK 569
>AE013599-2821|AAM68435.1| 637|Drosophila melanogaster CG15118-PC,
isoform C protein.
Length = 637
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 709 VDPELALALRVSMEEQRQ 762
VDP+LA+A+R+S +EQR+
Sbjct: 597 VDPDLAMAMRLSQQEQRK 614
>AE013599-2820|AAF57600.2| 637|Drosophila melanogaster CG15118-PB,
isoform B protein.
Length = 637
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 709 VDPELALALRVSMEEQRQ 762
VDP+LA+A+R+S +EQR+
Sbjct: 597 VDPDLAMAMRLSQQEQRK 614
>AE013599-2819|AAG22258.2| 637|Drosophila melanogaster CG15118-PA,
isoform A protein.
Length = 637
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/18 (61%), Positives = 17/18 (94%)
Frame = +1
Query: 709 VDPELALALRVSMEEQRQ 762
VDP+LA+A+R+S +EQR+
Sbjct: 597 VDPDLAMAMRLSQQEQRK 614
>BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p
protein.
Length = 1221
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 142 LQAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 264
LQ QD + + +K N NN +LTL +E +AT S+
Sbjct: 152 LQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 192
>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
protein.
Length = 1924
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 142 LQAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 264
LQ QD + + +K N NN +LTL +E +AT S+
Sbjct: 854 LQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 894
>AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA
protein.
Length = 1929
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 142 LQAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 264
LQ QD + + +K N NN +LTL +E +AT S+
Sbjct: 860 LQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 900
>AE014297-858|AAF54325.2| 643|Drosophila melanogaster CG11984-PC,
isoform C protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 396
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>AE014297-857|AAF54323.2| 643|Drosophila melanogaster CG11984-PB,
isoform B protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 396
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>AE014297-856|AAF54324.2| 643|Drosophila melanogaster CG11984-PA,
isoform A protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQGKNHKMRIVV 396
P G+ NL+T HL L+HRQG + ++
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQGPRELISFLI 148
>BT024222-1|ABC86284.1| 599|Drosophila melanogaster LP17815p
protein.
Length = 599
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQG 369
P G+ NL+T HL L+HRQG
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQG 139
>BT001502-1|AAN71257.1| 599|Drosophila melanogaster LD34776p
protein.
Length = 599
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQG 369
P G+ NL+T HL L+HRQG
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQG 139
>BT001483-1|AAN71238.1| 599|Drosophila melanogaster LD22379p
protein.
Length = 599
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQG 369
P G+ NL+T HL L+HRQG
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQG 139
>AY061066-1|AAL28614.1| 599|Drosophila melanogaster LD03515p
protein.
Length = 599
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 301 PNGDINLLTGIRIAHLALKHRQG 369
P G+ NL+T HL L+HRQG
Sbjct: 117 PGGEPNLVTDDFAGHLTLEHRQG 139
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,318,133
Number of Sequences: 53049
Number of extensions: 693546
Number of successful extensions: 1879
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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