Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3d08
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.78 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   5.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 274 MYISQISAWFSVKCCI-IDSVNNDIHF 351
           +Y+  +  +FSVKC I  +S+ NDI F
Sbjct: 340 LYVLNMEHFFSVKCSIQSESLLNDILF 366


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 478 VFIVHQKTNKQCDTLNTKKVQLAVLSLRAISSRQPS 585
           V+ +H +    CD   T+  Q+AVL  +   +  PS
Sbjct: 341 VYWMHFRGLMDCDERFTRAYQVAVLEYKGTQTNYPS 376


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = +2

Query: 608 DQQGKNGPKKPQP--DHILVTEP 670
           D Q +N PK+P+P  D   VT P
Sbjct: 322 DHQRRNEPKRPRPNIDRHEVTRP 344


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 418 ISIQIMSDTSDIYYY 374
           + +Q + D SDI+YY
Sbjct: 205 VQMQSVQDLSDIFYY 219


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 631 EEATTRPHPGNRAQGRARAPR 693
           EEA   P P  RA G A A R
Sbjct: 271 EEAERAPAPAVRAAGDAAAAR 291


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 250 LIFAYLLHMYISQISAWFS 306
           ++ A +  M ++Q+S WF+
Sbjct: 118 IMLAIITKMTLTQVSTWFA 136


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 566 IALSDKTAN*TFFVFNVS 513
           +A++DK AN     FNVS
Sbjct: 59  VAITDKIANFMLTFFNVS 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,708
Number of Sequences: 336
Number of extensions: 3612
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)