Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3d05
         (338 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    24   1.8  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    24   1.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   2.4  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   2.4  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   2.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   3.1  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    22   5.5  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    22   5.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   5.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   7.3  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         21   9.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    21   9.6  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    21   9.6  

>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 150 DSSGESILTPGLVRTSSQHGPLSASESRPQT 58
           + S  SIL P L+  ++QH  L++   R +T
Sbjct: 213 ERSETSILKPILIENTNQHAILTSPAKRAKT 243


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 150 DSSGESILTPGLVRTSSQHGPLSASESRPQT 58
           + S  SIL P L+  ++QH  L++   R +T
Sbjct: 214 ERSETSILKPILIENTNQHAILTSPAKRAKT 244


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 125 VNMDSPEESGKCRLTKEGRTGPGGKPSSQKS 217
           +N+D  E  G+   T    +G   +PSS +S
Sbjct: 881 LNLDRSEAGGRSLCTNGSSSGRDSQPSSARS 911


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 173 EGRTGPGGKPSSQKSPHRA 229
           +  T PGGKP    SP  A
Sbjct: 341 DAATNPGGKPWKNNSPQAA 359


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 173 EGRTGPGGKPSSQKSPHRA 229
           +  T PGGKP    SP  A
Sbjct: 341 DAATNPGGKPWKNNSPQAA 359


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -3

Query: 126  TPGLVRTSSQHGPLSASESRPQTILRTRPPSSRITGDATLPV 1
            TP L   S   GP SA +      L  + PSS  T    +P+
Sbjct: 1360 TPSLSSASGSIGPKSADQPGAAAGLHHQQPSSPPTQTIGIPL 1401


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 131 MDSPEESGKCRLTKEGRTGPGG 196
           +DS +++G C  +  G  GPGG
Sbjct: 569 LDS-QQAGSCGESLNGTVGPGG 589


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 37  RRSGTEDGLRSGLTGAEWPMLT 102
           +R+GT     SGLT A++P+++
Sbjct: 142 QRTGTRYAAGSGLTIADFPLVS 163


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -3

Query: 99   QHGPLSA-SESRPQTILRTRPPSS 31
            QH P S  ++ RP   L T PP+S
Sbjct: 1325 QHQPPSTQAQLRPSAPLNTSPPNS 1348


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 183 PGQGGNPAAKSPRIGQ*WDSGR 248
           P    NP  +SPR G  W S R
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCR 272


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 73 VPTSNHPPYP 44
          +PTS H PYP
Sbjct: 6  IPTSVHGPYP 15


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 98  NMGHSAPVSPDLKPSSVPDLR 36
           ++ HS P+S    PSS+   R
Sbjct: 522 SLNHSNPISSSAPPSSIVSRR 542


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 98  NMGHSAPVSPDLKPSSVPDLR 36
           ++ HS P+S    PSS+   R
Sbjct: 523 SLNHSNPISSSAPPSSIVSRR 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 349,490
Number of Sequences: 2352
Number of extensions: 7278
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)