Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3d01
(271 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81536-3|CAB63200.1| 333|Caenorhabditis elegans Hypothetical pr... 30 0.20
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 29 0.45
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 29 0.45
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 29 0.60
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 29 0.60
L16621-14|AAA28224.3| 612|Caenorhabditis elegans Glycosylation ... 27 1.4
AF031833-1|AAC13669.1| 612|Caenorhabditis elegans GLY3 protein. 27 1.4
AC006801-1|AAF60752.2| 501|Caenorhabditis elegans Hypothetical ... 27 1.8
Z81100-2|CAB03192.2| 332|Caenorhabditis elegans Hypothetical pr... 26 4.2
AL110500-13|CAB54495.1| 791|Caenorhabditis elegans Hypothetical... 26 4.2
Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z81463-5|CAB03853.1| 70|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z81100-4|CAE11309.1| 333|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 25 7.3
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z82058-1|CAB04862.2| 352|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z66519-13|CAI46547.1| 281|Caenorhabditis elegans Hypothetical p... 25 9.7
Z66519-12|CAA91376.2| 288|Caenorhabditis elegans Hypothetical p... 25 9.7
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z22181-11|CAE18061.1| 206|Caenorhabditis elegans Hypothetical p... 25 9.7
AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical ... 25 9.7
AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical ... 25 9.7
AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z81536-3|CAB63200.1| 333|Caenorhabditis elegans Hypothetical
protein F40D4.3 protein.
Length = 333
Score = 30.3 bits (65), Expect = 0.20
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 180 VFSFPLQSDPISGSTFCVTKQFFSTISFAFIGAITTLSYP 61
+F L+S PIS ST + +QFF +S I I +++P
Sbjct: 218 IFRHLLKSTPISRSTIRLQQQFFIAMSMQVILPIVIIAFP 257
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 116 FSPRYRSRL*VPLPHLVIQKLKRKINRTMFSARCLSYQ 3
+ P + +PLP LV K + MFSARC Y+
Sbjct: 744 YEPEVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYK 781
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.45
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 116 FSPRYRSRL*VPLPHLVIQKLKRKINRTMFSARCLSYQ 3
+ P + +PLP LV K + MFSARC Y+
Sbjct: 720 YEPEVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYK 757
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 81 WHL*TRTISWRKIVWSRRRCCRKSDL 158
W + RK +W R RCCR DL
Sbjct: 245 WRKNRSKMQCRKDIWGRNRCCRGVDL 270
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 81 WHL*TRTISWRKIVWSRRRCCRKSDL 158
W + RK +W R RCCR DL
Sbjct: 245 WRKNRSKMQCRKDIWGRNRCCRGVDL 270
>L16621-14|AAA28224.3| 612|Caenorhabditis elegans Glycosylation
related protein 3 protein.
Length = 612
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 174 SFPLQSDPISGSTFCVTKQFFSTI 103
S P+Q+ I+G F + KQFF I
Sbjct: 337 SMPIQTPTIAGGLFAIDKQFFYDI 360
>AF031833-1|AAC13669.1| 612|Caenorhabditis elegans GLY3 protein.
Length = 612
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 174 SFPLQSDPISGSTFCVTKQFFSTI 103
S P+Q+ I+G F + KQFF I
Sbjct: 337 SMPIQTPTIAGGLFAIDKQFFYDI 360
>AC006801-1|AAF60752.2| 501|Caenorhabditis elegans Hypothetical
protein Y52D5A.2 protein.
Length = 501
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +2
Query: 101 DIVEKNCLVTQKV---LPEIGSDCNGNEKT 181
D+ +NCLVTQ + + + G C G E T
Sbjct: 259 DLAARNCLVTQDLKAKISDFGLSCQGTEVT 288
>Z81100-2|CAB03192.2| 332|Caenorhabditis elegans Hypothetical
protein K08G2.5 protein.
Length = 332
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 180 VFSFPLQSDPISGSTFCVTKQFFSTISFAFIGAITTLSYP 61
+F L+ +P+S +T + QFF +S I I L++P
Sbjct: 217 IFRQLLKHEPVSRNTQRLQHQFFIAMSLQVIIPIVILAFP 256
>AL110500-13|CAB54495.1| 791|Caenorhabditis elegans Hypothetical
protein Y87G2A.12 protein.
Length = 791
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 168 PLQSDPISGSTFCVTKQFFSTISF 97
P+QS I G+ T+QF STIS+
Sbjct: 196 PIQSQGIFGACSISTQQFSSTISY 219
>Z69790-4|CAA93655.1| 282|Caenorhabditis elegans Hypothetical
protein F33C8.3 protein.
Length = 282
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 22 ALNIVLFIFRFNFWIT 69
AL IV F+F F FW++
Sbjct: 7 ALRIVTFLFNFAFWLS 22
>Z81463-5|CAB03853.1| 70|Caenorhabditis elegans Hypothetical
protein C06B8.8 protein.
Length = 70
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 59 KLKRKINRTMFSARCLSY 6
K+K+ N T F RC SY
Sbjct: 24 KIKKNSNNTKFKVRCASY 41
>Z81100-4|CAE11309.1| 333|Caenorhabditis elegans Hypothetical
protein K08G2.12 protein.
Length = 333
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 180 VFSFPLQSDPISGSTFCVTKQFFSTISFAFIGAITTLSYP 61
+F L+ +P+S +T + QFF +S I I +++P
Sbjct: 218 IFRQLLKHEPVSRNTQRLQHQFFIAMSLQVIIPIVIIAFP 257
>Z70287-2|CAA94298.2| 700|Caenorhabditis elegans Hypothetical
protein R09E10.3 protein.
Length = 700
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -2
Query: 129 VTKQFFSTISFAFIGAITTLSYP 61
+T+Q S ++F + G T ++YP
Sbjct: 9 ITRQVISRLTFRYSGLFTRITYP 31
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -2
Query: 189 TNPVFSFPLQSDPISGSTFCVTKQFFSTISFAFIGAITTLS 67
T+ +F+F +P ST + +FF TIS F G++ +S
Sbjct: 9 THSLFNFLSTFNP---STISIISKFFETISSLFSGSLHFMS 46
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 92 NANDIVEKNCLVTQKVLPEIGSDCN 166
NAN I+ C +T +VL E D N
Sbjct: 50 NANAIIGDICTITFRVLTETDDDAN 74
>Z82058-1|CAB04862.2| 352|Caenorhabditis elegans Hypothetical
protein T27C5.1 protein.
Length = 352
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 138 TFCVTKQFFSTISFAFIGAITTLSYPKI 55
T C FF +F+FIG + + P +
Sbjct: 82 TLCTLYVFFPMYAFSFIGVLAWIGVPTL 109
>Z66519-13|CAI46547.1| 281|Caenorhabditis elegans Hypothetical
protein B0334.2b protein.
Length = 281
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 153 PISGSTFCVTKQFFSTISFAFIG 85
P SG+ + + +FS ISFA +G
Sbjct: 146 PHSGAAYSIDDCYFSFISFATVG 168
>Z66519-12|CAA91376.2| 288|Caenorhabditis elegans Hypothetical
protein B0334.2a protein.
Length = 288
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 153 PISGSTFCVTKQFFSTISFAFIG 85
P SG+ + + +FS ISFA +G
Sbjct: 153 PHSGAAYSIDDCYFSFISFATVG 175
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
protein T16G12.5 protein.
Length = 1142
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 77 VMAPINANDIVEKNCLVTQKVLPEIGSDCNGNEKTGFVYLIFHPV 211
VM P + + +K VT + EIG D NGN+ T F + H +
Sbjct: 608 VMTPSHRVALEKK--FVTSSKIQEIGGDSNGND-TPFDEMWLHGI 649
>Z22181-11|CAE18061.1| 206|Caenorhabditis elegans Hypothetical
protein ZK632.14 protein.
Length = 206
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = -2
Query: 183 PVFSFPLQSDPISGSTFCVTKQFFSTISFAFIGAITT 73
PV + DP G C++ Q S AF+ I T
Sbjct: 118 PVIFIVISRDPFPGEYSCMSMQCSSDKDIAFLPVIRT 154
>AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical
protein C24G6.2b protein.
Length = 430
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 83 APINANDIVEKNCLVTQKVLPEIGSDCNGNE 175
+P+ N + +NC V K+LPE + + +E
Sbjct: 101 SPLGINLMRAENCQVAVKMLPEYADEMSKHE 131
>AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical
protein C24G6.2a protein.
Length = 903
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 83 APINANDIVEKNCLVTQKVLPEIGSDCNGNE 175
+P+ N + +NC V K+LPE + + +E
Sbjct: 574 SPLGINLMRAENCQVAVKMLPEYADEMSKHE 604
>AC006733-8|AAF60490.1| 600|Caenorhabditis elegans Hypothetical
protein Y32H12A.7 protein.
Length = 600
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -2
Query: 165 LQSDPISGSTFCVTKQFFSTISFAFIGAITTLSYPKIKAK 46
L+ +P S + C+ + + T+ + + T YP++K +
Sbjct: 195 LEIEPFSIGSGCIAQVYRGTVDISELEKATGKEYPELKGR 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,747,366
Number of Sequences: 27780
Number of extensions: 105762
Number of successful extensions: 271
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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