Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3d01
(271 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 28 0.023
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 28 0.023
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.22
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.22
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 1.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 22 1.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 1.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 6.2
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 20 6.2
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 19 8.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 8.2
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 27.9 bits (59), Expect = 0.023
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -1
Query: 208 RMKN*INEPSFFISITIRSDFRQHLLRDQTIFLH-----DIVRVYRC 83
R+ + + EPSF+I +++ D + HLL + +H D + YRC
Sbjct: 163 RVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHSLEFSDQIHGYRC 209
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 27.9 bits (59), Expect = 0.023
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -1
Query: 208 RMKN*INEPSFFISITIRSDFRQHLLRDQTIFLH-----DIVRVYRC 83
R+ + + EPSF+I +++ D + HLL + +H D + YRC
Sbjct: 163 RVVSWLQEPSFYIYPSLQGDGKFHLLPTGELLVHSLEFSDQIHGYRC 209
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.22
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = -3
Query: 245 NNYLFELQFKN*QDEKLNKRTQFFHFHYNQIRFPAAPSA*PNNFSPR 105
NNY + N + NK+ + + QI P NF PR
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPPR 138
Score = 21.0 bits (42), Expect = 2.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 193 FNFSSC*FLNCNSNK*LFYRKIN 261
+N+++ + N N NK L+Y IN
Sbjct: 96 YNYNNNNYNNNNYNKKLYYNIIN 118
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.22
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = -3
Query: 245 NNYLFELQFKN*QDEKLNKRTQFFHFHYNQIRFPAAPSA*PNNFSPR 105
NNY + N + NK+ + + QI P NF PR
Sbjct: 92 NNYKYNYNNNNYNNNNYNKKLYYNIINIEQIPVPVPVPVYCGNFPPR 138
Score = 21.0 bits (42), Expect = 2.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 193 FNFSSC*FLNCNSNK*LFYRKIN 261
+N+++ + N N NK L+Y IN
Sbjct: 96 YNYNNNNYNNNNYNKKLYYNIIN 118
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 85 TYKRERYRGEKLFGH 129
TYK++RY +L GH
Sbjct: 234 TYKKQRYPWVQLAGH 248
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 85 TYKRERYRGEKLFGH 129
TYK++RY +L GH
Sbjct: 149 TYKKQRYPWVQLAGH 163
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 1.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 85 TYKRERYRGEKLFGH 129
TYK++RY +L GH
Sbjct: 468 TYKKQRYPWVQLAGH 482
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 19.8 bits (39), Expect = 6.2
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = -2
Query: 123 KQFFSTISFAFIGAITTLSYPKI 55
K+FF + F+G + Y ++
Sbjct: 63 KEFFDQMGVHFVGFVGQYGYDRV 85
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 19.8 bits (39), Expect = 6.2
Identities = 12/42 (28%), Positives = 16/42 (38%)
Frame = +1
Query: 31 IVLFIFRFNFWITKCGNGTYKRERYRGEKLFGHAEGAAGNRI 156
++LFI I C TY G++ E A N I
Sbjct: 7 LILFILSLTITIVMCQTFTYSHGWTNGKRSTSLEELANRNAI 48
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 19.4 bits (38), Expect = 8.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 113 KNCLVTQKVLPEIGSDCNGNEKTGFV 190
+NCL KVL +G + + + G +
Sbjct: 65 RNCLEKLKVLVPLGPETSRHTTLGLL 90
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.4 bits (38), Expect = 8.2
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +2
Query: 71 SVVMAPINANDIVEKNCLVTQKVLP 145
S P+NA + C+V LP
Sbjct: 589 SFTKLPMNAGEFANLQCIVPTGDLP 613
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,245
Number of Sequences: 438
Number of extensions: 1556
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5138079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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