Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3c24
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   4.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   4.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   4.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   6.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    20   8.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 GYPAAKLRSYHWSV 185
           G  A+KL S+HW +
Sbjct: 233 GMAASKLNSFHWHI 246


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 24  SDKMTKGTSSFGKRRNKTHTLCRRCGR 104
           S+   K  S++   R   + LCR C R
Sbjct: 256 SESKNKSESAWKNLREDYNRLCRLCKR 282


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 24  SDKMTKGTSSFGKRRNKTHTLCRRCGR 104
           S+   K  S++   R   + LCR C R
Sbjct: 256 SESKNKSESAWKNLREDYNRLCRLCKR 282


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 24  SDKMTKGTSSFGKRRNKTHTLCRRCGR 104
           S+   K  S++   R   + LCR C R
Sbjct: 256 SESKNKSESAWKNLREDYNRLCRLCKR 282


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 138 GRIXIFECDMTIYHIFCI 85
           G I  F+CD+     FC+
Sbjct: 370 GFISDFDCDINSIQYFCL 387


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 85  YAEDVVDRHITFKNXNAPNVDILQQNYDPTTGQ*RLS 195
           YA   +D H      N    DI+Q  Y   TG  R++
Sbjct: 209 YAFATIDPHNFNMISNDDESDIIQGGYISVTGLKRVN 245


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +1

Query: 142 VDILQQNYD 168
           +D+LQ+NYD
Sbjct: 1   MDVLQKNYD 9


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,870
Number of Sequences: 336
Number of extensions: 1391
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)