Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3c21
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   7.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 259 LXCIKANVLNTTAAICRXSALFLNISNSGW-VISRVLSIAMYXL 131
           + CI++N+++         A FL +SN+ +   S V + + Y L
Sbjct: 77  IRCIESNMISFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYSL 120


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 392 SVDGAQQHPLVFCKQNG 342
           +VDG Q+HPL     NG
Sbjct: 146 NVDGCQKHPLCNDDPNG 162


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 371 HPLVFCKQNGFSGNACVISFSDHKL 297
           HP V     G+SG+ C   F+   +
Sbjct: 119 HPQVLLSPGGYSGSLCDQGFAQQPM 143


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +3

Query: 267 PLVTNFTNKMEFVVTETNDTSIPGEPILFTE 359
           P++  +T +   +V     T  PG P  F E
Sbjct: 300 PMIFGYTTREGMIVEMMRKTETPGMPNDFEE 330


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 558 YRNLVVYLTRNHRCASCFC 502
           YR    + + ++ C +CFC
Sbjct: 680 YRQEAQWTSSDNPCTTCFC 698


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,977
Number of Sequences: 336
Number of extensions: 2739
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)