Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3c12
(667 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VJ38 Cluster: 39S ribosomal protein L13, mitochondria... 298 9e-80
UniRef50_Q9BYD1 Cluster: 39S ribosomal protein L13, mitochondria... 182 7e-45
UniRef50_Q95QL2 Cluster: Putative uncharacterized protein; n=2; ... 147 2e-34
UniRef50_UPI0000587F9B Cluster: PREDICTED: similar to LOC496258 ... 120 4e-26
UniRef50_Q9VJ39 Cluster: CG10602-PA, isoform A; n=5; Diptera|Rep... 92 1e-17
UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candida... 83 8e-15
UniRef50_O60118 Cluster: Mitochondrial ribosomal protein subunit... 79 1e-13
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 78 2e-13
UniRef50_A6NPQ7 Cluster: 50S ribosomal protein L13; n=1; Bactero... 77 4e-13
UniRef50_Q5D9Q2 Cluster: SJCHGC04496 protein; n=1; Schistosoma j... 77 5e-13
UniRef50_Q5KM48 Cluster: Mitochondrial ribosomal protein L23, pu... 76 9e-13
UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59; Bacter... 75 1e-12
UniRef50_A5IYP4 Cluster: 50S ribosomal protein L13; n=5; Bacteri... 73 8e-12
UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30; Bacter... 73 8e-12
UniRef50_Q6MQH5 Cluster: 50S ribosomal protein L13; n=2; Bacteri... 72 1e-11
UniRef50_Q68XD5 Cluster: 50S ribosomal protein L13; n=66; Bacter... 72 1e-11
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 71 2e-11
UniRef50_Q92IV5 Cluster: 50S ribosomal protein L13; n=8; Bacteri... 71 3e-11
UniRef50_A6DL17 Cluster: 50S ribosomal protein L13; n=1; Lentisp... 70 4e-11
UniRef50_Q4UGV0 Cluster: Ribosomal protein l13, putative; n=10; ... 69 1e-10
UniRef50_Q7WFC3 Cluster: 50S ribosomal protein L13; n=265; Bacte... 69 1e-10
UniRef50_UPI0000E7FF91 Cluster: PREDICTED: similar to Mitochondr... 68 2e-10
UniRef50_Q6F0X2 Cluster: 50S ribosomal protein L13; n=3; Mollicu... 68 2e-10
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 67 3e-10
UniRef50_Q9RXY1 Cluster: 50S ribosomal protein L13; n=6; Bacteri... 67 3e-10
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 65 1e-09
UniRef50_A6REK7 Cluster: Ribosomal protein L13; n=14; Ascomycota... 65 1e-09
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 65 2e-09
UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33; Bacter... 64 3e-09
UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycopla... 64 4e-09
UniRef50_UPI0000ECCFC5 Cluster: 39S ribosomal protein L13, mitoc... 63 5e-09
UniRef50_A3EQS3 Cluster: 50S ribosomal protein L13; n=1; Leptosp... 63 7e-09
UniRef50_Q39JK0 Cluster: 50S ribosomal protein L13; n=129; Bacte... 63 7e-09
UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17; Bacter... 61 3e-08
UniRef50_Q4JTD5 Cluster: 50S ribosomal protein L13; n=1; Coryneb... 60 4e-08
UniRef50_O51314 Cluster: 50S ribosomal protein L13; n=3; Borreli... 60 5e-08
UniRef50_Q4Q2H6 Cluster: 50S ribosomal protein L13-like protein;... 58 1e-07
UniRef50_Q86KA5 Cluster: Similar to Synechocystis sp. (Strain PC... 58 3e-07
UniRef50_P47657 Cluster: 50S ribosomal protein L13; n=6; Mycopla... 57 4e-07
UniRef50_P49551 Cluster: Chloroplast 50S ribosomal protein L13; ... 56 1e-06
UniRef50_Q0CXR3 Cluster: 60S ribosomal protein L23, mitochondria... 55 1e-06
UniRef50_O46915 Cluster: Chloroplast 50S ribosomal protein L13; ... 55 1e-06
UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast ... 54 2e-06
UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowie... 54 4e-06
UniRef50_A0T0K1 Cluster: 50S ribosomal protein L13; n=1; Phaeoda... 52 9e-06
UniRef50_A6S034 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 51 3e-05
UniRef50_A6C0P0 Cluster: 50S ribosomal protein L13; n=1; Plancto... 50 5e-05
UniRef50_Q30UF8 Cluster: 50S ribosomal protein L13; n=1; Thiomic... 50 7e-05
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 50 7e-05
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 47 4e-04
UniRef50_O84127 Cluster: 50S ribosomal protein L13; n=7; Chlamyd... 47 4e-04
UniRef50_UPI0000557C3B Cluster: COG0102: Ribosomal protein L13; ... 36 0.66
UniRef50_Q56869 Cluster: WbcG; n=2; Yersinia enterocolitica|Rep:... 36 0.66
UniRef50_UPI000155CBA6 Cluster: PREDICTED: hypothetical protein;... 36 0.88
UniRef50_A4B611 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q5CYS8 Cluster: Protein containing ringfinger+4xC2H2+li... 33 4.7
UniRef50_Q18BK5 Cluster: Galactose-1-phosphate uridylyltransfera... 33 6.2
UniRef50_A3Z1N9 Cluster: Putative uncharacterized protein; n=2; ... 33 6.2
UniRef50_A5AH52 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q7RL09 Cluster: Putative uncharacterized protein PY0273... 33 6.2
UniRef50_A1TRN9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
UniRef50_A1AXF1 Cluster: Methyltransferase FkbM; n=1; Candidatus... 33 8.2
>UniRef50_Q9VJ38 Cluster: 39S ribosomal protein L13, mitochondrial;
n=7; Endopterygota|Rep: 39S ribosomal protein L13,
mitochondrial - Drosophila melanogaster (Fruit fly)
Length = 178
Score = 298 bits (731), Expect = 9e-80
Identities = 123/175 (70%), Positives = 152/175 (86%)
Frame = +1
Query: 85 MSAAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCIN 264
MS AKRVQQWATFAR+WHI+DC WQ+P+ESA ++K +L+G+ KPIYHPMNDCGD VV IN
Sbjct: 1 MSIAKRVQQWATFARTWHIYDCTWQNPFESAKLVKTHLLGLQKPIYHPMNDCGDHVVLIN 60
Query: 265 SREIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHT 444
+REIAL GDEW KR YFHHTGYPGGASWTLAW+LH KDPTM++KKAVY +M GNLQRRHT
Sbjct: 61 TREIALPGDEWVKRVYFHHTGYPGGASWTLAWQLHEKDPTMVMKKAVYNSMRGNLQRRHT 120
Query: 445 MQRLFIYPGENVPEDVLQNVTNQIRQIRYVPKRLDHIPEEEVKNYPKVMEYPEDF 609
MQRL ++ + VPE++LQNVTNQIR R +P+RLDHI +E ++N+P +M+YP+D+
Sbjct: 121 MQRLHLFADDQVPEEILQNVTNQIRTPRSIPQRLDHIDKETLENFPNIMDYPKDY 175
>UniRef50_Q9BYD1 Cluster: 39S ribosomal protein L13, mitochondrial;
n=25; Eumetazoa|Rep: 39S ribosomal protein L13,
mitochondrial - Homo sapiens (Human)
Length = 178
Score = 182 bits (443), Expect = 7e-45
Identities = 78/174 (44%), Positives = 115/174 (66%)
Frame = +1
Query: 88 SAAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINS 267
S ++ QQWATFAR W++ D K Q P + A + L G+HKP+YH ++DCGD VV +N+
Sbjct: 3 SFSRAPQQWATFARIWYLLDGKMQPPGKLAAMASIRLQGLHKPVYHALSDCGDHVVIMNT 62
Query: 268 REIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTM 447
R IA G++W ++ Y HTGYPGG A +LH +DP I+K A+Y + NL RR M
Sbjct: 63 RHIAFSGNKWEQKVYSSHTGYPGGFRQVTAAQLHLRDPVAIVKLAIYGMLPKNLHRRTMM 122
Query: 448 QRLFIYPGENVPEDVLQNVTNQIRQIRYVPKRLDHIPEEEVKNYPKVMEYPEDF 609
+RL ++P E +PED+L+N+ ++ Q R +PKRLD +EE+ +P++ PED+
Sbjct: 123 ERLHLFPDEYIPEDILKNLVEELPQPRKIPKRLDEYTQEEIDAFPRLWTPPEDY 176
>UniRef50_Q95QL2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 205
Score = 147 bits (356), Expect = 2e-34
Identities = 67/176 (38%), Positives = 102/176 (57%)
Frame = +1
Query: 76 RYTMSAAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVV 255
R +S RV QW F+R WH+ D QD + +YL G HKPI+HP DCGD VV
Sbjct: 4 RRAVSRFDRVNQWLQFSRQWHVIDANQQDAELLGDKVARYLAGKHKPIFHPETDCGDHVV 63
Query: 256 CINSREIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQR 435
N ++IA+ +W+ Y + YP + AW++H+ D I +VYR++ NL R
Sbjct: 64 VTNCKDIAMHAFDWKHTIYKFNMEYPKSKADIPAWQIHDYDQCRIAFLSVYRSLGNNLLR 123
Query: 436 RHTMQRLFIYPGENVPEDVLQNVTNQIRQIRYVPKRLDHIPEEEVKNYPKVMEYPE 603
R +QRL ++P E + E V +N+ +Q+RQ++ V KR D EE N+P+V+++ +
Sbjct: 124 RRHIQRLHLFPDEEMAEFVRKNIGSQLRQVQGVVKRSDEYTAEERANFPRVVKFAD 179
>UniRef50_UPI0000587F9B Cluster: PREDICTED: similar to LOC496258
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to LOC496258 protein,
partial - Strongylocentrotus purpuratus
Length = 100
Score = 120 bits (288), Expect = 4e-26
Identities = 51/98 (52%), Positives = 66/98 (67%)
Frame = +1
Query: 91 AAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSR 270
+++ QQWATF+R W++ D Q P A I K L G HKPIYHP++D GD VV IN+
Sbjct: 2 SSRITQQWATFSRIWYLIDAYRQPPGRVAVAISKVLQGKHKPIYHPLSDVGDHVVVINTS 61
Query: 271 EIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPT 384
++A D+W ++ Y+HHTGYPGG S T A E H KDPT
Sbjct: 62 QVAYAKDKWEEKIYYHHTGYPGGFSETPAHEFHQKDPT 99
>UniRef50_Q9VJ39 Cluster: CG10602-PA, isoform A; n=5; Diptera|Rep:
CG10602-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 684
Score = 91.9 bits (218), Expect = 1e-17
Identities = 35/49 (71%), Positives = 44/49 (89%)
Frame = +1
Query: 85 MSAAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPM 231
MS AKRVQQWATFAR+WHI+DC WQ+P+ESA ++K +L+G+ KPIYHPM
Sbjct: 1 MSIAKRVQQWATFARTWHIYDCTWQNPFESAKLVKTHLLGLQKPIYHPM 49
>UniRef50_Q6YR78 Cluster: 50S ribosomal protein L13; n=2; Candidatus
Phytoplasma asteris|Rep: 50S ribosomal protein L13 -
Onion yellows phytoplasma
Length = 152
Score = 82.6 bits (195), Expect = 8e-15
Identities = 39/120 (32%), Positives = 63/120 (52%)
Frame = +1
Query: 118 TFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEW 297
T WH+ D K + A + L G HK Y P D GD V+ +N+ I L G +W
Sbjct: 20 TVKPKWHLVDAKGKTLGRLATKVASILKGKHKTHYTPHVDNGDYVIVVNAAYIHLTGKKW 79
Query: 298 RKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGEN 477
+++ Y+ H+GYPGG + +A E+ K PT +++KA+ + ++LF+Y +N
Sbjct: 80 QQKTYYKHSGYPGGLTKVVASEMMRKFPTRMVEKAILGMVPHTKLGSQIGKKLFVYAEQN 139
>UniRef50_O60118 Cluster: Mitochondrial ribosomal protein subunit
L13; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit L13 - Schizosaccharomyces
pombe (Fission yeast)
Length = 157
Score = 79.0 bits (186), Expect = 1e-13
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 121 FARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWR 300
+A+ WH K A I LMG HKPIYHP DCGDVVV + EI + G +
Sbjct: 12 YAKVWHHVSAKNVPLGRLASQIATTLMGKHKPIYHPAADCGDVVVVTDCSEIGISGRKLE 71
Query: 301 KRAYFHHTGYPGG-ASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGEN 477
Y+ H+G PG WT+ + ++++AV + N M+RL+IY G
Sbjct: 72 NHKYYSHSGQPGHLKEWTMEEMAAKRGHKDLLRRAVGGMLPRNKLWDRRMKRLYIYDGAE 131
Query: 478 VP 483
P
Sbjct: 132 HP 133
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 78.2 bits (184), Expect = 2e-13
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Frame = +1
Query: 121 FARSWHIFDCKWQDPY--ESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDE 294
FAR WH D A I L+G HKP+YHP DCGD VV N ++I + G +
Sbjct: 12 FARLWHHVDVARDKRTLGRLASAIAITLIGRHKPVYHPSQDCGDYVVVTNCQKIRVTGKK 71
Query: 295 WRKRAYFHHTGYPGGAS-WTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
+ ++ Y+ H+G PG T+ + +K I+KKAV + N R+ + RL ++ G
Sbjct: 72 FEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGMLPKNKLRKQRLDRLKVFDG 131
Query: 472 ENVPEDVLQNVTNQIRQIRYVPKRL 546
P QN+T + +P+ L
Sbjct: 132 SENP--YKQNITAFAHEQSSIPEPL 154
>UniRef50_A6NPQ7 Cluster: 50S ribosomal protein L13; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L13 - Bacteroides capillosus ATCC 29799
Length = 148
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/115 (34%), Positives = 59/115 (51%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W+I D + ++A L G HKP + P DCGD VV IN+ + L G + ++
Sbjct: 18 RKWYILDAAGKPLGKTAATAATLLRGKHKPEFTPHADCGDFVVIINAEKAVLTGKKGEQK 77
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
Y H+GYPGG T L + P + +K A+ M N+ + ++ RL IY G
Sbjct: 78 FYRTHSGYPGGLKETKYRILMQEKPELAMKVAIRGMMPRNVVTKDSLTRLHIYRG 132
>UniRef50_Q5D9Q2 Cluster: SJCHGC04496 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04496 protein - Schistosoma
japonicum (Blood fluke)
Length = 105
Score = 76.6 bits (180), Expect = 5e-13
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = +1
Query: 361 ELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG--ENVPEDVLQNVTNQIRQIRYV 534
E+H +DPT +I+ + N R++ + RL IYP E VP+D++ NV+ I Q+ V
Sbjct: 3 EIHQRDPTEVIRLETKAILRNNESRKYQLFRLHIYPENIETVPKDIIANVSGVIPQVMRV 62
Query: 535 PKRLDHIPEEEVKNYPKVMEYPEDF 609
PKRLD E+K +PK+ ++PED+
Sbjct: 63 PKRLDEYSPSELKEFPKLFDWPEDY 87
>UniRef50_Q5KM48 Cluster: Mitochondrial ribosomal protein L23,
putative; n=2; Basidiomycota|Rep: Mitochondrial
ribosomal protein L23, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 163
Score = 75.8 bits (178), Expect = 9e-13
Identities = 50/146 (34%), Positives = 67/146 (45%)
Frame = +1
Query: 85 MSAAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCIN 264
MSA K A R WH + + A I LMG HKP Y P D GD V+ +
Sbjct: 1 MSATKGNTALA-LTRVWHHTSAQNRVLGTLASRIAWVLMGKHKPTYDPAVDAGDYVIVSD 59
Query: 265 SREIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHT 444
+ ++ L G + + Y HHTG+ GG L + P II+KAV + N R
Sbjct: 60 ALQVRLTGKKATDKVYHHHTGFMGGLKKVPITRLRERRPEEIIRKAVSGMLPKNTFRDRR 119
Query: 445 MQRLFIYPGENVPEDVLQNVTNQIRQ 522
++RL I+PG PE NV R+
Sbjct: 120 LERLKIFPGA-APETYKGNVLTTWRE 144
>UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59;
Bacteria|Rep: 50S ribosomal protein L13 -
Symbiobacterium thermophilum
Length = 143
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/119 (28%), Positives = 60/119 (50%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W++ D + + A + L G HKP + P DCGD V+ +N+ +I + G + +
Sbjct: 14 RKWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDK 73
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y+ H+GYPGG T ++ + P +++ A+ + N R ++L +Y G P
Sbjct: 74 VYYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPHNRLGRQMYRKLKVYAGPEHP 132
>UniRef50_A5IYP4 Cluster: 50S ribosomal protein L13; n=5;
Bacteria|Rep: 50S ribosomal protein L13 - Mycoplasma
agalactiae
Length = 144
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W + D + Q A + L G KP + P D GD V+ IN+ + + +
Sbjct: 14 KKWFVVDAENQVVGRLAAFVASVLRGKTKPTFTPNADMGDYVIIINAEKAIFTAKKEEDK 73
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVY----RAMTGNLQRRH 441
Y+HH+GYPGG A +L K PT I++KA+Y GN QRR+
Sbjct: 74 VYYHHSGYPGGLKSITAAKLRAKKPTAIVEKAIYGMLPHTKLGNKQRRN 122
>UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30;
Bacteria|Rep: 50S ribosomal protein L13 - Nitrosomonas
europaea
Length = 144
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/122 (31%), Positives = 61/122 (50%)
Frame = +1
Query: 133 WHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRAY 312
W + D + A I L G HKPIY P D GD +V IN+ ++ + G++ + Y
Sbjct: 15 WFVVDATDKVLGRLAAAIAHRLRGKHKPIYTPHVDTGDYIVVINADKLRVTGNKAEDKKY 74
Query: 313 FHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPEDV 492
+ H+GYPGG T ++H + PT ++KAV + +++L IY G+ P
Sbjct: 75 YRHSGYPGGIYETTFKKMHERFPTRPLEKAVKGMLPKGPLGYAMIKKLKIYAGDTHPHAA 134
Query: 493 LQ 498
Q
Sbjct: 135 QQ 136
>UniRef50_Q6MQH5 Cluster: 50S ribosomal protein L13; n=2;
Bacteria|Rep: 50S ribosomal protein L13 - Bdellovibrio
bacteriovorus
Length = 146
Score = 72.1 bits (169), Expect = 1e-11
Identities = 40/119 (33%), Positives = 56/119 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W I D Q A + L G +K IY P D GD VV IN+ ++ L G +W+ +
Sbjct: 13 RKWWIVDAAGQKVGRVATHVATILRGKNKAIYTPNVDTGDFVVVINTDKMELSGTKWQDK 72
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y+ HT + G A + KD T II +AV + N RH + ++ Y G P
Sbjct: 73 KYYSHTRFFGSLKEMTAAQAKEKDSTFIIHEAVRGMLPTNKLSRHVIMKMKAYTGAEHP 131
>UniRef50_Q68XD5 Cluster: 50S ribosomal protein L13; n=66;
Bacteria|Rep: 50S ribosomal protein L13 - Rickettsia
typhi
Length = 155
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRK- 303
+ W + D K A + L G HKP + P DCGD ++ IN+ I L G +
Sbjct: 13 KKWWVIDAKNIVLGRLASRVAIMLRGKHKPSFTPHLDCGDNIIIINAEHIKLTGKKLNHK 72
Query: 304 --RAYFHHTGYPGGASWTLAWE-LHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIY 465
+ Y+ HTG+PGG T A + L K P +IK AV R +T N+ M L++Y
Sbjct: 73 DGKVYYRHTGFPGGIKDTTAGKILSGKYPERVIKMAVKRMITRNVLGAKQMSNLYVY 129
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/119 (31%), Positives = 60/119 (50%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W++ D + + A I + L G +KP Y P D GD VV +N+ ++ + G + ++
Sbjct: 13 RKWYVIDAEGKTLGRLAAEISRLLRGKNKPQYTPHVDVGDFVVVVNADKVEVTGRKAEQK 72
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y HTGYPGG ++ K P I+++AV M R +++L IY G P
Sbjct: 73 VYRWHTGYPGGLRERSYRQMLRKRPEEILRQAVRGMMPKTRLARRQLKKLRIYAGPEHP 131
>UniRef50_Q92IV5 Cluster: 50S ribosomal protein L13; n=8;
Bacteria|Rep: 50S ribosomal protein L13 - Rickettsia
conorii
Length = 155
Score = 70.5 bits (165), Expect = 3e-11
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRK- 303
+ W + D K A + L G HKP + P DCGD ++ IN+ + L G +
Sbjct: 13 KKWWVIDAKNIVLGRLASRVANMLRGKHKPSFTPHLDCGDNIIIINAEHVKLTGKKANPK 72
Query: 304 --RAYFHHTGYPGGASWTLAWE-LHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGE 474
+ Y+ +TG+PGG T A + L K P +IK AV R +T N M L++Y
Sbjct: 73 DGKIYYRYTGFPGGIKDTTAGKILSGKHPERVIKMAVKRMITRNALGAKQMSNLYVYANG 132
Query: 475 NVP 483
+ P
Sbjct: 133 DHP 135
>UniRef50_A6DL17 Cluster: 50S ribosomal protein L13; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L13 - Lentisphaera araneosa HTCC2155
Length = 141
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/128 (31%), Positives = 61/128 (47%)
Frame = +1
Query: 121 FARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWR 300
F R W +FD + Q A I L G +P Y P DCG V+ IN+ ++ L G +
Sbjct: 11 FERKWLVFDAEEQVLGRLAVRIADALRGKDEPTYTPHMDCGANVIVINADKVKLTGRKET 70
Query: 301 KRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENV 480
++ Y HTG+ GG + T E+ KD T ++ AV + R ++L +Y G
Sbjct: 71 EKTYIGHTGWVGGQTVTTPEEVRAKDSTRLVLWAVKGMLDDGRLGRSLFKKLHVYTGAEH 130
Query: 481 PEDVLQNV 504
P + + V
Sbjct: 131 PHEAQKPV 138
>UniRef50_Q4UGV0 Cluster: Ribosomal protein l13, putative; n=10;
Aconoidasida|Rep: Ribosomal protein l13, putative -
Theileria annulata
Length = 257
Score = 68.9 bits (161), Expect = 1e-10
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +1
Query: 118 TFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEW 297
T A +WHI D + A + L G H P Y P GD V+ +N+ + + G W
Sbjct: 60 TTAGNWHIIDAANKTVGSIASHVSVILQGKHLPTYQPNKVTGDNVIIVNAINVVMNGHSW 119
Query: 298 RKRAY-FHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGE 474
+ Y F +P G A + +P MI+ A+ R + N R +RLFIY G
Sbjct: 120 DTKVYKFDRKAHPKGPKIITAKTIMANNPGMILNLAIKRMLPRNKLRPFWYRRLFIYGGA 179
Query: 475 NVPE-DVLQNVTNQIRQIRYVPKRLDHIPEEEVKNYP 582
P + Q V + +++ ++ +I E+ P
Sbjct: 180 IHPHWGIPQVVVSAPSHTKHLSSQVGNIQPNEMNGGP 216
>UniRef50_Q7WFC3 Cluster: 50S ribosomal protein L13; n=265;
Bacteria|Rep: 50S ribosomal protein L13 - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 142
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/124 (30%), Positives = 59/124 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W + D K + A + L G HKP + P D GD +V IN+ +I + G++ + +
Sbjct: 13 RDWFVIDAKGKVLGRVASEVAHRLRGKHKPEFTPHVDTGDYIVIINAADIVVTGNKAQDK 72
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPE 486
YF HT YPGG T ++ + P I+KAV + +++L +Y G P
Sbjct: 73 KYFRHTTYPGGIRETNFEKMQQRFPGRAIQKAVKGMLPKGPLGYAMIKKLKVYAGAEHPH 132
Query: 487 DVLQ 498
Q
Sbjct: 133 TAQQ 136
>UniRef50_UPI0000E7FF91 Cluster: PREDICTED: similar to Mitochondrial
ribosomal protein L13; n=1; Gallus gallus|Rep:
PREDICTED: similar to Mitochondrial ribosomal protein
L13 - Gallus gallus
Length = 106
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +1
Query: 367 HNKDPTM-IIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPEDVLQNVTNQIRQIRYVPKR 543
H +D ++ I+K +YR + NL RR MQRL ++P + +PED+ +N+ +I Q R VP+R
Sbjct: 29 HERDFSVHIVKLTIYRMLPKNLLRRTLMQRLHLFPDDVIPEDIEKNLLQEIPQPRVVPRR 88
Query: 544 LDHIPEEEVKNYPKV 588
LD EE+ +P+V
Sbjct: 89 LDEYTPEEIAAFPRV 103
>UniRef50_Q6F0X2 Cluster: 50S ribosomal protein L13; n=3;
Mollicutes|Rep: 50S ribosomal protein L13 - Mesoplasma
florum (Acholeplasma florum)
Length = 150
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/119 (26%), Positives = 61/119 (51%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
++W+I D Q+ + + + L G HK + P + GD V+ IN+ ++ G + +
Sbjct: 14 KNWYIVDAAGQNVGRLSTEVARILRGKHKVDFTPHMNNGDHVIIINAEKVLFTGKKESDK 73
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y+HH+ +PGG D T I+++++ + N+Q R+ + L ++ GEN P
Sbjct: 74 TYYHHSMHPGGLRRRTVAVQRELDATKILERSIRLMLPKNVQGRNQFRALHVFVGENHP 132
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/130 (28%), Positives = 62/130 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W + D + Q A + L G +KP + P D GD VV +N+ +I + G++ ++
Sbjct: 14 RQWFLVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQK 73
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPE 486
Y H+G PGG L ++ P I++KA+ + N R ++L +Y G P
Sbjct: 74 LYRRHSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNALGRQLFRKLKVYRGPEHPH 133
Query: 487 DVLQNVTNQI 516
+ T Q+
Sbjct: 134 SAQRPQTLQL 143
>UniRef50_Q9RXY1 Cluster: 50S ribosomal protein L13; n=6;
Bacteria|Rep: 50S ribosomal protein L13 - Deinococcus
radiodurans
Length = 174
Score = 67.3 bits (157), Expect = 3e-10
Identities = 38/119 (31%), Positives = 57/119 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
++W + D A +I + G H+P + P GD VV IN+ ++AL G + +
Sbjct: 39 QNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDK 98
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y +TGY GG A E +K P +I+ AV+ + Q R RL +Y GE P
Sbjct: 99 VYTRYTGYQGGLKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHP 157
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/115 (28%), Positives = 58/115 (50%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W + D + A I K LMG HK + P ++ GD V+ IN+ ++ + G ++ ++
Sbjct: 69 KQWWVIDAEGMRLGRMATEIAKRLMGKHKVTFFPGSNMGDYVIVINADKVVISGAKFYQK 128
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
YF H+G PGG + +L + P I++KAV + R + L ++ G
Sbjct: 129 EYFRHSGRPGGVTVESFEQLQARIPERIVEKAVKGMLPKGPLGREQFRHLKVFAG 183
>UniRef50_A6REK7 Cluster: Ribosomal protein L13; n=14;
Ascomycota|Rep: Ribosomal protein L13 - Ajellomyces
capsulatus NAm1
Length = 180
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Frame = +1
Query: 121 FARSWHIFDCKWQDPYESAHV---IKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGD 291
++R+WH D +DP + I +LMG HKPI+ P DCGD VV + ++ G
Sbjct: 12 YSRTWHYIDVS-RDPRSLGRLASSIAVFLMGKHKPIWDPSTDCGDYVVAVGCHDLHTTGK 70
Query: 292 EWRKRAYFHHTGYPGG-ASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYP 468
+ K+ Y+ H PG S T+ +++KAV + N R + RL ++
Sbjct: 71 KRFKKLYYTHNTRPGSLKSMTMDKMFEKWGGGEVLRKAVSGMLPKNRLRDKRLARLKVFE 130
Query: 469 GENVP 483
G P
Sbjct: 131 GHAHP 135
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/119 (28%), Positives = 57/119 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W++ D + Q A + L G + P + P D GD VV +N+ +I + G + +++
Sbjct: 14 RQWYVVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQK 73
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y H+G PGG L + P I++KA+ + N R ++L +Y G P
Sbjct: 74 LYRRHSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNALGRQMYRKLKVYKGTEHP 132
>UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33;
Bacteria|Rep: 50S ribosomal protein L13 - Bartonella
henselae (Rochalimaea henselae)
Length = 154
Score = 64.1 bits (149), Expect = 3e-09
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W I D + A + L G HK + P D GD V+ IN+ +I+L G ++ +
Sbjct: 13 KKWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTGKKYTDK 72
Query: 307 AYFHHTGYPGGASWTLAWE-LHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y+ HTGY GG A + L + P +++KAV R + R ++ L +Y G P
Sbjct: 73 KYYWHTGYIGGIKKRTARQILEGRFPERVVEKAVERMIPRGPLGRRQLKNLRVYAGSQHP 132
Query: 484 EDVLQNVTNQIRQIRYVPKRL 546
Q + + KR+
Sbjct: 133 HAAQQPEALDVGALNRKNKRI 153
>UniRef50_Q6KI61 Cluster: 50S ribosomal protein l13; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein l13 - Mycoplasma
mobile
Length = 144
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/115 (28%), Positives = 55/115 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W + D + Q A V+ YL G +KP + P D GD ++ IN+ ++ L + +
Sbjct: 14 KKWFVVDAEGQVLGRLASVVASYLRGKNKPTFTPNVDMGDNIIVINADKVVLTAKKEDDK 73
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
Y+ +GY GG A +L K P +++KAV + R L++Y G
Sbjct: 74 IYYSSSGYNGGLKAINARDLRAKKPFALVEKAVKGMIPHTKLGRKQFGNLYVYAG 128
>UniRef50_UPI0000ECCFC5 Cluster: 39S ribosomal protein L13,
mitochondrial (L13mt) (MRP-L13).; n=2; Gallus
gallus|Rep: 39S ribosomal protein L13, mitochondrial
(L13mt) (MRP-L13). - Gallus gallus
Length = 69
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 424 NLQRRHTMQRLFIYPGENVPEDVLQNVTNQIRQIRYVPKRLDHIPEEEVKNYPKVMEYPE 603
NL RR MQRL ++P + +PED+ +N+ +I Q R VP+RLD EE+ +P+V P+
Sbjct: 5 NLLRRTLMQRLHLFPDDVIPEDIEKNLLQEIPQPRVVPRRLDEYTPEEIAAFPRVWTPPK 64
Query: 604 DF 609
DF
Sbjct: 65 DF 66
>UniRef50_A3EQS3 Cluster: 50S ribosomal protein L13; n=1;
Leptospirillum sp. Group II UBA|Rep: 50S ribosomal
protein L13 - Leptospirillum sp. Group II UBA
Length = 151
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/115 (26%), Positives = 57/115 (49%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W + D + + + + + L G K + P D GD V+ IN+ ++ L G++ +
Sbjct: 16 KKWFLIDAAGKTVGKVSVEVARILRGKGKVCFTPHQDLGDYVIVINAGKVVLTGNKITDK 75
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
Y+ H+GYPGG A ++ + P I+ +V + N + M RL ++PG
Sbjct: 76 MYYRHSGYPGGFKEERAKDVLERKPETILTHSVKGMLPKNKLAKLYMTRLRVFPG 130
>UniRef50_Q39JK0 Cluster: 50S ribosomal protein L13; n=129;
Bacteria|Rep: 50S ribosomal protein L13 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 142
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/93 (30%), Positives = 50/93 (53%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W++ D + A + + L G HKP + P D GD ++ IN+ ++ + G++ +
Sbjct: 13 REWYVIDATDKVLGRVASEVARRLRGKHKPEFTPHVDTGDFIIIINASKLKVTGNKTLDK 72
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAV 405
Y+ H+GYPGG T ++ + P ++KAV
Sbjct: 73 KYYRHSGYPGGIYETTFGKMQERFPGRALEKAV 105
>UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17;
Bacteria|Rep: 50S ribosomal protein L13 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/120 (28%), Positives = 57/120 (47%)
Frame = +1
Query: 124 ARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRK 303
AR W + D Q A + + L G P Y P D GD VV IN+ +I + G +
Sbjct: 11 ARKWFVVDADGQTLGRLASRVARILSGKDNPKYTPFIDTGDHVVVINAEKIKITGLKADN 70
Query: 304 RAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
+ Y+H++GYPGG + + P +I++ A+ + + + +L +Y G + P
Sbjct: 71 KKYYHYSGYPGGMKEEEFLKRLERRPELILETAIKGMLPKSKLGKAMGGKLKVYRGADHP 130
>UniRef50_Q4JTD5 Cluster: 50S ribosomal protein L13; n=1;
Corynebacterium jeikeium K411|Rep: 50S ribosomal protein
L13 - Corynebacterium jeikeium (strain K411)
Length = 190
Score = 60.5 bits (140), Expect = 4e-08
Identities = 33/133 (24%), Positives = 61/133 (45%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W++ D A L G KP + P DCGD V+ IN+ ++ + ++ +
Sbjct: 56 RKWYVIDATDVVLGRLAVTAADLLRGKKKPYFAPNVDCGDNVIIINADKVHVSSNKRERE 115
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPE 486
+ H+GYPGG P ++++AV M N R ++++L ++ G
Sbjct: 116 MRYRHSGYPGGLKTMSLGRSLELHPERVVEEAVKGMMPHNKLSRASIKKLRVFAGPEHTF 175
Query: 487 DVLQNVTNQIRQI 525
+ + T +I+Q+
Sbjct: 176 EAQKPETYEIKQV 188
>UniRef50_O51314 Cluster: 50S ribosomal protein L13; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L13 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 146
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/118 (26%), Positives = 57/118 (48%)
Frame = +1
Query: 118 TFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEW 297
T + W++ D + + A + K L G HK Y P D GD V+ IN+ ++ L G ++
Sbjct: 16 TVEKKWYVIDAADRILGKVAVDVVKILRGKHKAYYTPHQDLGDNVIIINASKVKLTGKKY 75
Query: 298 RKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
+++ Y+ H+ YPGG L + P ++ A+ + R+ + L ++ G
Sbjct: 76 QQKLYYRHSRYPGGLYSDTFRTLSERKPCAPLEIAIKGMLPKGPLGRNLFRNLKVFSG 133
>UniRef50_Q4Q2H6 Cluster: 50S ribosomal protein L13-like protein;
n=5; Trypanosomatidae|Rep: 50S ribosomal protein
L13-like protein - Leishmania major
Length = 171
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Frame = +1
Query: 106 QQW-ATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIAL 282
+QW W + D + Q A + +Y+ G H+P + P GD VV N ++ +
Sbjct: 3 KQWLCREGERWWLLDARGQQLPHVAKIAAQYMTGQHRPDFTPGMMTGDHVVITNIKDAVM 62
Query: 283 RGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPTMI----IKKAVYRAMTGNLQRRHT-M 447
GD W + T YPGG E++ +DP M+ +K V R L+ R +
Sbjct: 63 TGDNWIRVPITWQTAYPGGKYRVRLSEMYERDPCMVMWWYLKDEVNRHFVRKLKTRTAPL 122
Query: 448 QRLFIY 465
++ ++Y
Sbjct: 123 EKAWLY 128
>UniRef50_Q86KA5 Cluster: Similar to Synechocystis sp. (Strain PCC
6803). 50S ribosomal protein L13; n=2; Dictyostelium
discoideum|Rep: Similar to Synechocystis sp. (Strain PCC
6803). 50S ribosomal protein L13 - Dictyostelium
discoideum (Slime mold)
Length = 200
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = +1
Query: 118 TFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYH---PMNDCGDVVVCINSREIALRG 288
T + WH+ D A I + L G HKPIY P+ +CGD VV +N+ ++ G
Sbjct: 11 TSSHLWHVIDASGHRVGRLATKISELLRGKHKPIYDRSVPL-ECGDYVVVLNAHKVEFTG 69
Query: 289 DEWRKRAYFHHTGYP 333
+W ++ Y H+GYP
Sbjct: 70 KKWDQKMYRKHSGYP 84
>UniRef50_P47657 Cluster: 50S ribosomal protein L13; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L13 -
Mycoplasma genitalium
Length = 146
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/116 (24%), Positives = 55/116 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R W++ D + A + G +K + P DCGD ++ INS ++ L G++
Sbjct: 16 RKWYLVDASGLVLGKLAVKAANLIRGKNKANFTPNQDCGDHLIIINSDQVVLTGNKKDNE 75
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGE 474
++HH+ Y GG T ++ NK+ ++ AV + N R + ++ ++ +
Sbjct: 76 FWYHHSQYMGGIKKTSGRDMINKNSDKLVFNAVKGMLPDNRLSRRLITKVHVFKND 131
>UniRef50_P49551 Cluster: Chloroplast 50S ribosomal protein L13;
n=2; Coscinodiscophyceae|Rep: Chloroplast 50S ribosomal
protein L13 - Odontella sinensis (Marine centric diatom)
Length = 139
Score = 55.6 bits (128), Expect = 1e-06
Identities = 37/119 (31%), Positives = 58/119 (48%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
++W + DCK Q A VI + L G K YHP D GD VV IN++++ D + R
Sbjct: 14 KNWCLIDCKDQKLGRIAVVISRLLSGKQKLHYHPAFDVGDYVVVINAQDMIF--DSQQPR 71
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
+ G PG L ++ N P+ ++ A+Y + ++ +RL IY G + P
Sbjct: 72 FSVNVPGRPG----RLLKQVINALPSQLLMTAIYGMLPEGSAKKSLPKRLKIYNGPDHP 126
>UniRef50_Q0CXR3 Cluster: 60S ribosomal protein L23, mitochondrial;
n=1; Aspergillus terreus NIH2624|Rep: 60S ribosomal
protein L23, mitochondrial - Aspergillus terreus (strain
NIH 2624)
Length = 127
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +1
Query: 199 MGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRAYFHHTGYPGG-ASWTLAWELHNK 375
MG HKPIY P DCGD VV I ++ G + ++ Y+ HT PG S T+
Sbjct: 1 MGKHKPIYDPSTDCGDYVVAIGCHDLRTTGKKRFQKKYYTHTTRPGSLRSMTMDKMFEKW 60
Query: 376 DPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPG 471
++++AV + N R + RL + G
Sbjct: 61 GGGEVLRRAVRGMLPKNRLREKRLARLKTFEG 92
>UniRef50_O46915 Cluster: Chloroplast 50S ribosomal protein L13;
n=4; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L13 - Guillardia theta (Cryptomonas phi)
Length = 143
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/119 (26%), Positives = 58/119 (48%)
Frame = +1
Query: 133 WHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRAY 312
W I D ++ A K L+G + P+Y P + +++V IN+ +I + G++ + Y
Sbjct: 16 WFIIDATDKNLGRLASETAKTLVGKYDPLYAPNVNPKNIIVIINADKIRVTGNKKFDKFY 75
Query: 313 FHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPED 489
+ H+G GG + EL ++ P I++KAV + R L +Y G + P +
Sbjct: 76 YRHSGQVGGLTIETFNELQSRLPGRILEKAVKGILPKGPLGRELFNNLKVYAGSSHPHE 134
>UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast
precursor; n=47; cellular organisms|Rep: 50S ribosomal
protein L13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 241
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/134 (23%), Positives = 59/134 (44%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W + D + A I ++ G + Y P D G V+ +N+ ++A+ G + ++
Sbjct: 103 KPWFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQK 162
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPE 486
Y H+G PGG + +L + P I++ AV + R L +Y G + P
Sbjct: 163 LYRRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPH 222
Query: 487 DVLQNVTNQIRQIR 528
+ + + IR R
Sbjct: 223 EAQKPLDLPIRDKR 236
>UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL13 - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 273
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +1
Query: 130 SWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRA 309
+W + D + Q A + +MG P+YHP + G VV IN+ ++ + G ++ +
Sbjct: 125 TWIVLDAQDQILGRLASLAATLVMGKWHPLYHPAMNMGAHVVIINADKVRVTGRKYTDKL 184
Query: 310 YFHH-TGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
Y H TG PG +L + P I++ A+ + R ++L IY G+ P
Sbjct: 185 YKRHVTGRPGSMKSEAFRDLQARIPERIVEVAIKGMLPKTRLGREQFKQLHIYAGDENP 243
>UniRef50_A0T0K1 Cluster: 50S ribosomal protein L13; n=1;
Phaeodactylum tricornutum|Rep: 50S ribosomal protein L13
- Phaeodactylum tricornutum
Length = 155
Score = 52.4 bits (120), Expect = 9e-06
Identities = 38/119 (31%), Positives = 56/119 (47%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
R+W I DCK Q A +I L G KP Y+P D GD V+ +N+ I + +E K
Sbjct: 17 RNWFIIDCKNQKLGRLATIIVSLLKGKTKPHYYPSIDIGDYVILLNADSIII--NENSKH 74
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
+ G PG S + + P I++AV + M + + M+RL IY + P
Sbjct: 75 YIVNKPGKPG--SSLKIKNVSDCLPKFTIERAV-KGMLSETETKRLMRRLNIYSESSHP 130
>UniRef50_A6S034 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 190
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 196 LMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNK 375
LMG HKPI+ P DCGD VV N + G + ++ Y+ H PG L K
Sbjct: 63 LMGKHKPIWDPSTDCGDYVVVTNCANLHTTGKKMYQKKYYRHNTRPGSLKEISMEGLMEK 122
Query: 376 -DPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
+++KAV + N R + RL + G P
Sbjct: 123 FGGAEVLRKAVSGMLPKNRLRDGRLGRLKAFEGAAHP 159
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 50.8 bits (116), Expect = 3e-05
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 2/148 (1%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
+ W + D + V YL G + Y P + G VV IN+ +I + G++ ++
Sbjct: 72 KPWVVIDAAGLRLGRLSTVAATYLRGGNSGCYTPAFNMGVNVVVINADKIVVTGNKANQK 131
Query: 307 AYFHH--TGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENV 480
Y+ G PG LH + P +I+KA+ + N R T L +Y G +
Sbjct: 132 LYYTLGVRGKPGSMKEETYASLHARQPARVIEKAIKGMLPKNRMGRETFTHLKVYAGADH 191
Query: 481 PEDVLQNVTNQIRQIRYVPKRLDHIPEE 564
P QN T+ ++ + H+ EE
Sbjct: 192 PH-AAQNPTDVTADVKAATHKA-HMLEE 217
>UniRef50_A6C0P0 Cluster: 50S ribosomal protein L13; n=1;
Planctomyces maris DSM 8797|Rep: 50S ribosomal protein
L13 - Planctomyces maris DSM 8797
Length = 155
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Frame = +1
Query: 118 TFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDE- 294
T W + D A I LMG HKP Y P D GD V+ +N ++ G E
Sbjct: 6 TINPEWFVVDADNLIVGRLAAKIATVLMGKHKPTYTPHVDTGDYVIVVNCDKVKFSGKEL 65
Query: 295 -----------WRKRAYFHHTGYPGGAS-WTLAWELHNKDPTMIIKKAVYRAMTGNLQRR 438
++ Y ++GYP G T +L T ++ +AV R + N R
Sbjct: 66 AHDSHPYFSQKMLRKGYATYSGYPSGLKVVTAEKKLERGQSTQVLSEAVRRMLPKNKLGR 125
Query: 439 HTMQRLFIYPG 471
+++L +Y G
Sbjct: 126 QMLKKLKLYAG 136
>UniRef50_Q30UF8 Cluster: 50S ribosomal protein L13; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: 50S
ribosomal protein L13 - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 140
Score = 49.6 bits (113), Expect = 7e-05
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRG-DEWRK 303
+ W + D + + + L G +KP + P DCGD VV +N+ + G +
Sbjct: 14 QKWVLIDAEGKTFGRIITEVATLLRGKNKPCFTPNIDCGDYVVVVNASKAKFNGLGKIAN 73
Query: 304 RAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
+ YF ++GY G T EL K+P + K A + +++L IY P
Sbjct: 74 KEYFSYSGYFGSVKSTKMTELLEKNPEKLYKLATRGMLPKTKLGAKMIKKLKIYASAEHP 133
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/117 (23%), Positives = 57/117 (48%)
Frame = +1
Query: 133 WHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRAY 312
W++ D + Q + A LMG ++ Y + + V+ INSR++A+ G++ ++ Y
Sbjct: 16 WYLIDAQDQILGKIATKAAIILMGKNRSTYSYNSMSANFVIIINSRQVAITGNKNTQKVY 75
Query: 313 FHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVP 483
++ PG + L + P I+++AV + ++ + L +Y G++ P
Sbjct: 76 KRYSAKPGATKTESFYHLKKRIPNRILEQAVKGMLPKSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/113 (23%), Positives = 48/113 (42%)
Frame = +1
Query: 136 HIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKRAYF 315
H+ D + A + L G +K Y + V +N + + G + + Y+
Sbjct: 7 HVLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGSKAVGKVYY 66
Query: 316 HHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGE 474
H+G+PGG T +L + P +++ AV+ + N R M L ++ E
Sbjct: 67 RHSGHPGGLRRTKLHDLMLRSPATVLRAAVHGMLPRNRLRDRFMSMLMVHANE 119
>UniRef50_O84127 Cluster: 50S ribosomal protein L13; n=7;
Chlamydiaceae|Rep: 50S ribosomal protein L13 - Chlamydia
trachomatis
Length = 150
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/117 (22%), Positives = 54/117 (46%)
Frame = +1
Query: 127 RSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVVCINSREIALRGDEWRKR 306
++W++ + + + + + K L G HK + P GD V+ IN+ ++ L G + ++
Sbjct: 20 KAWYVVNAEGKTLGRLSSEVAKILRGKHKVTFTPHVAMGDGVIVINAEKVRLTGAKRAQK 79
Query: 307 AYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGEN 477
Y ++TG+ G + + P +I+ AV + R M+ L + G +
Sbjct: 80 VYHYYTGFISGMREVPFENMIARKPAYVIEHAVKGMLPKTKLGRRQMKSLRVLKGSS 136
>UniRef50_UPI0000557C3B Cluster: COG0102: Ribosomal protein L13;
n=1; Mycoplasma genitalium G37|Rep: COG0102: Ribosomal
protein L13 - Mycoplasma genitalium G-37
Length = 94
Score = 36.3 bits (80), Expect = 0.66
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +1
Query: 76 RYTMSAAKRVQQWATFARSWHIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMNDCGDVVV 255
+Y + ++ A R W++ D + A + G +K + P DCGD ++
Sbjct: 16 KYMQKTSMLTKEEAIKNRKWYLVDASGLVLGKLAVKAANLIRGKNKANFTPNQDCGDHLI 75
Query: 256 CINSREIALRGDE 294
INS ++ L G++
Sbjct: 76 IINSDQVVLTGNK 88
>UniRef50_Q56869 Cluster: WbcG; n=2; Yersinia enterocolitica|Rep:
WbcG - Yersinia enterocolitica (type 0:8)
Length = 288
Score = 36.3 bits (80), Expect = 0.66
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = -2
Query: 276 YLSTIYTDNNISTIVHRMVYGFVHAHQIFFYNVSGFIRILPFAVEYVPTTSKC 118
Y ++Y +++ +++ Y ++ + F+Y +SGFIR L F+ + ++C
Sbjct: 236 YSFSLYLSKSLAVLIYAAKYAYITKFKSFYYMISGFIRALNFSFKIHKGKNEC 288
>UniRef50_UPI000155CBA6 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 912
Score = 35.9 bits (79), Expect = 0.88
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 376 DPTMI-IKKAVYRAMTGNLQRRHTM--QRLFIYPGENVPEDVLQNVTNQIRQIRYVPKRL 546
DPT++ +K+A+ + NL+R ++ RL I P PEDV+ + ++ + YV + L
Sbjct: 208 DPTLVDMKQALEDSARENLERAFSVAQDRLHI-PRLLEPEDVMVDTPDEQSVMTYVAQFL 266
Query: 547 DHIPEEEVKNYP 582
+H PE E ++ P
Sbjct: 267 EHFPELEGEDVP 278
>UniRef50_A4B611 Cluster: Putative uncharacterized protein; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
uncharacterized protein - Alteromonas macleodii 'Deep
ecotype'
Length = 126
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1
Query: 130 SWHIFDCKWQDPYESAHVIKKYLMGMHKPIY-H-PMNDCGDVV-VCINSRE 273
SWH+ K QDP++S +YL ++P+Y H P+ D V +C+ SR+
Sbjct: 32 SWHVQPEK-QDPFKSKEAAVEYLNSHNEPLYLHVPLAQSDDFVRICVTSRD 81
>UniRef50_Q5CYS8 Cluster: Protein containing
ringfinger+4xC2H2+littlefinger domains; n=2;
Cryptosporidium|Rep: Protein containing
ringfinger+4xC2H2+littlefinger domains - Cryptosporidium
parvum Iowa II
Length = 1074
Score = 33.5 bits (73), Expect = 4.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 361 ELHNKDPTMIIKKAVYRAMTGNLQRRHTMQRLFIYPGENVPEDVLQNVT-NQIRQ 522
++ K+ T+I + R GNLQ ++RL I+P EN + +N+ QI+Q
Sbjct: 664 DIQEKNITIISNTSFPRFSFGNLQSSIEIERLKIHPQENTENQIQENINKKQIKQ 718
>UniRef50_Q18BK5 Cluster: Galactose-1-phosphate uridylyltransferase;
n=2; Clostridium difficile|Rep: Galactose-1-phosphate
uridylyltransferase - Clostridium difficile (strain 630)
Length = 316
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = -2
Query: 312 ISTFPPLVASKSYLSTIYTDNNISTIVHRMVYGFVHAHQIFFYNVSGFIRILPFAVEY 139
+S PP + ++ +S Y D+N S++ ++ + + YN F+ ++P+A +Y
Sbjct: 158 MSFIPPEITNELLVSKEYYDSNKSSLYDDLIENEISLDRRVVYNGEAFLVLIPYATKY 215
>UniRef50_A3Z1N9 Cluster: Putative uncharacterized protein; n=2;
Synechococcus sp. WH 5701|Rep: Putative uncharacterized
protein - Synechococcus sp. WH 5701
Length = 123
Score = 33.1 bits (72), Expect = 6.2
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 301 KRAYFHHTGYPGGASWTLAWEL-HNKDPTMII 393
+ Y HH GYP GA+W A L HN + + +
Sbjct: 18 RHLYLHHDGYPTGAAWRFATALRHNHEASAFL 49
>UniRef50_A5AH52 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 592
Score = 33.1 bits (72), Expect = 6.2
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 136 HIFDCKWQDPYESAHVIKKYLMGMHKPIYHPMN 234
H+++ + +DP+E + ++ + M ++ P YHP N
Sbjct: 535 HVYNDQIKDPHEDSQLMDGWKMQIYNPFYHPQN 567
>UniRef50_Q7RL09 Cluster: Putative uncharacterized protein PY02739;
n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY02739 - Plasmodium yoelii yoelii
Length = 1604
Score = 33.1 bits (72), Expect = 6.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 315 EISTFPPLVASKSYLSTIYTDNNISTIVHRMVYGFVHAHQIFFYN 181
++ T +S NN +TI+H +VYG + H+IF+ N
Sbjct: 1266 DVDTLKNTAIDNYSISNSIARNNNNTILHCLVYGILKTHKIFYKN 1310
>UniRef50_A1TRN9 Cluster: Putative uncharacterized protein; n=1;
Acidovorax avenae subsp. citrulli AAC00-1|Rep: Putative
uncharacterized protein - Acidovorax avenae subsp.
citrulli (strain AAC00-1)
Length = 736
Score = 32.7 bits (71), Expect = 8.2
Identities = 24/92 (26%), Positives = 35/92 (38%)
Frame = +1
Query: 247 VVVCINSREIALRGDEWRKRAYFHHTGYPGGASWTLAWELHNKDPTMIIKKAVYRAMTGN 426
V + R A GD+ +R H G P +WT AW L + P ++ Y + G
Sbjct: 433 VFISDRQRARAGAGDDRVRRTLPHPPGVP--LAWTPAWSLTREAPCLLPLAHCYAGVPGR 490
Query: 427 LQRRHTMQRLFIYPGENVPEDVLQNVTNQIRQ 522
R G V E VLQ + + +
Sbjct: 491 WSRYGEWNSNGCAAGNGVEEAVLQGLLEVVER 522
>UniRef50_A1AXF1 Cluster: Methyltransferase FkbM; n=1; Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)|Rep:
Methyltransferase FkbM - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 314
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 79 YTMSAAKRVQQWATFARSWH--IFDCKWQDPYESAHVIKKYLMGMHKPIY 222
YT S K WA + RSW FD W D +I+ G H +Y
Sbjct: 153 YTFSKYKACWGWAAWRRSWENMDFDMSWLDSCSKNIIIENMGYGKHSIVY 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,080,945
Number of Sequences: 1657284
Number of extensions: 13904424
Number of successful extensions: 37576
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 36260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37546
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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