Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3c09
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.4  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   2.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   2.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 372 KSYLHFIVQLLSCMVTSEVNYFYK 301
           ++Y+HF  QLL  ++T  +   YK
Sbjct: 156 QNYIHFFYQLLLYLITDMILMRYK 179



 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +1

Query: 310 IIDFACDHTRKKLHNEMQVTFAMIKPLPTEIV 405
           + DF C HT +   N +   + ++  L T+++
Sbjct: 143 VFDFLCRHTVEYFQNYIHFFYQLLLYLITDMI 174


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 463 SRLTAEDINILYRSQVTDPTFPFLLDYLTGE-MVYGLELVG 582
           +R   EDIN+ Y  +  DP    L D   G+  V+ + LVG
Sbjct: 126 TRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVG 166


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 463 SRLTAEDINILYRSQVTDPTFPFLLDYLTGE-MVYGLELVG 582
           +R   EDIN+ Y  +  DP    L D   G+  V+ + LVG
Sbjct: 126 TRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVG 166


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 414 NFTNDFSWKGFNHSKSYLHFIVQLLSCMVT 325
           NF +  S+   + +KS+  F+  L+ C VT
Sbjct: 27  NFNHRESYFRLSKAKSFCTFVAALVYCSVT 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 157 FNIFYYPSDDTI 192
           F++FYYPS  T+
Sbjct: 103 FDLFYYPSRQTL 114


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 151 RRFNIFYYPSDDTIEMYDLKSRKTFVKRV 237
           RR  IFYY     I  ++++     +KRV
Sbjct: 227 RRGEIFYYMHQQIIARFNIERLCNGLKRV 255


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 616 GDKDPRKAEIGSI 654
           G+ +PRK +IG I
Sbjct: 31  GENEPRKQDIGEI 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,421
Number of Sequences: 336
Number of extensions: 3410
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)