Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3c09
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-999|AAF54425.1| 387|Drosophila melanogaster CG8362-PA ... 90 3e-18
AY069763-1|AAL39908.1| 387|Drosophila melanogaster RE01365p pro... 89 4e-18
AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cat... 29 4.6
AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cat... 29 4.6
AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB... 29 4.6
AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA... 29 4.6
AE013599-3911|AAF47235.2| 324|Drosophila melanogaster CG13587-P... 29 6.0
>AE014297-999|AAF54425.1| 387|Drosophila melanogaster CG8362-PA
protein.
Length = 387
Score = 89.8 bits (213), Expect = 3e-18
Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Frame = +1
Query: 103 KYSFIGEWYDNQANLKRRFNIFYYPSDDTIEMYDLKSRKTFVKRVKVNGVTLDRFYIGCT 282
+ +F+ EW+ +A + R F I YY SD +E++D ++++TF++R K+ +T F++G
Sbjct: 12 RLAFVAEWFHAEAGIIRTFLITYYVSDKAVEVFDQRNKRTFLRRTKIPELTQRDFFVGSK 71
Query: 283 LSILGRLIKIIDFACDHTRKKLHNEMQVTFAMIK-PLPTEIVGKILSHFHEHGLRVTKMK 459
+++ GR I+D+A D TR L + F ++K + T+ +GK L ++ + + +
Sbjct: 72 INVFGRQFDIVDYADDTTRTNLAKYRKKGFVLLKNNMWTKHLGKFLKTLIDNKININQGM 131
Query: 460 KSRLTAEDI-NILYRSQVTDPTFPFLLDYLTGEMVYGLELVGRDAVLVCIKLLGDKDPRK 636
+ + + + L TD + L++ L LEL+G D V+ IK +
Sbjct: 132 MVQFSPKMVTQFLSGKDTTDVSSSVLMNELLAGPAISLELIG-DNVVETIKACAQYKSTE 190
Query: 637 AEIGSIR 657
AE S++
Sbjct: 191 AETPSVK 197
>AY069763-1|AAL39908.1| 387|Drosophila melanogaster RE01365p
protein.
Length = 387
Score = 89.4 bits (212), Expect = 4e-18
Identities = 50/187 (26%), Positives = 98/187 (52%), Gaps = 2/187 (1%)
Frame = +1
Query: 103 KYSFIGEWYDNQANLKRRFNIFYYPSDDTIEMYDLKSRKTFVKRVKVNGVTLDRFYIGCT 282
+ +F+ EW+ +A + R F I YY SD +E++D ++++TF++R K+ +T F++G
Sbjct: 12 RLAFVAEWFHAEAGIIRTFLITYYVSDKVVEVFDQRNKRTFLRRTKIPELTQRDFFVGSK 71
Query: 283 LSILGRLIKIIDFACDHTRKKLHNEMQVTFAMIK-PLPTEIVGKILSHFHEHGLRVTKMK 459
+++ GR ++D+A D TR L + F ++K + T+ +GK L ++ + + +
Sbjct: 72 INVFGRQFDVVDYADDTTRTNLAKYRKKGFVLLKNNMWTKHLGKFLKTLIDNKININQGM 131
Query: 460 KSRLTAEDI-NILYRSQVTDPTFPFLLDYLTGEMVYGLELVGRDAVLVCIKLLGDKDPRK 636
+ + + + L TD + L++ L LEL+G D V+ IK +
Sbjct: 132 MVQFSPKMVTQFLSGKDTTDVSSSVLMNELLAGPAISLELIG-DNVVETIKACAQYKSTE 190
Query: 637 AEIGSIR 657
AE S++
Sbjct: 191 AETPSVK 197
>AJ277968-1|CAB96205.1| 1128|Drosophila melanogaster TRPgamma cation
channel long form protein.
Length = 1128
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 190 IEMYDLKSRKTFVKRV----KVNGVTLDRFYIGCTLSILGRLIKIIDFACD--HTRKKLH 351
+ Y+ + K + KR+ K G ++ +G +LGR K D C+ HT +H
Sbjct: 900 VTKYNKSALKPYNKRIAGHKKRWGTLIEAAKVGNVSKMLGRS-KSEDSVCNSSHTSTPVH 958
Query: 352 NEMQVTFAMIKP 387
+M+VT+A P
Sbjct: 959 GQMRVTYAQNSP 970
>AJ277967-1|CAB96204.1| 1128|Drosophila melanogaster TRPgamma cation
channel short form protein.
Length = 1128
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 190 IEMYDLKSRKTFVKRV----KVNGVTLDRFYIGCTLSILGRLIKIIDFACD--HTRKKLH 351
+ Y+ + K + KR+ K G ++ +G +LGR K D C+ HT +H
Sbjct: 900 VTKYNKSALKPYNKRIAGHKKRWGTLIEAAKVGNVSKMLGRS-KSEDSVCNSSHTSTPVH 958
Query: 352 NEMQVTFAMIKP 387
+M+VT+A P
Sbjct: 959 GQMRVTYAQNSP 970
>AE014134-2741|AAN10950.1| 1128|Drosophila melanogaster CG5996-PB,
isoform B protein.
Length = 1128
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 190 IEMYDLKSRKTFVKRV----KVNGVTLDRFYIGCTLSILGRLIKIIDFACD--HTRKKLH 351
+ Y+ + K + KR+ K G ++ +G +LGR K D C+ HT +H
Sbjct: 900 VTKYNKSALKPYNKRIAGHKKRWGTLIEAAKVGNVSKMLGRS-KSEDSVCNSSHTSTPVH 958
Query: 352 NEMQVTFAMIKP 387
+M+VT+A P
Sbjct: 959 GQMRVTYAQNSP 970
>AE014134-2740|AAF53548.2| 1128|Drosophila melanogaster CG5996-PA,
isoform A protein.
Length = 1128
Score = 29.5 bits (63), Expect = 4.6
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 190 IEMYDLKSRKTFVKRV----KVNGVTLDRFYIGCTLSILGRLIKIIDFACD--HTRKKLH 351
+ Y+ + K + KR+ K G ++ +G +LGR K D C+ HT +H
Sbjct: 900 VTKYNKSALKPYNKRIAGHKKRWGTLIEAAKVGNVSKMLGRS-KSEDSVCNSSHTSTPVH 958
Query: 352 NEMQVTFAMIKP 387
+M+VT+A P
Sbjct: 959 GQMRVTYAQNSP 970
>AE013599-3911|AAF47235.2| 324|Drosophila melanogaster CG13587-PA
protein.
Length = 324
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 211 FLSHTFL*YHQKGSKKC*TGVLNLLDCHTIRQ 116
FL T+L +GS C TG LN L H +RQ
Sbjct: 7 FLVFTYLMGVSRGSLNCPTGKLNPLQFHLVRQ 38
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,057,730
Number of Sequences: 53049
Number of extensions: 517883
Number of successful extensions: 1234
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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