Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3c08
         (354 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro...    27   6.9  
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ...    27   6.9  
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC...    27   6.9  
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB...    27   6.9  
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA...    27   6.9  
AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA...    27   6.9  
AE014134-833|AAN10518.3| 1491|Drosophila melanogaster CG34126-PB...    27   9.1  

>AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p protein.
          Length = 1712

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 329  HHVRDGYANXRSAPTQRERSQRANQKRKTAQR 234
            HH RD + + R    +RER + A +K+K  Q+
Sbjct: 995  HHHRDYHHHHRERERERERERSALKKKKHQQQ 1026


>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
            protein SMRTER protein.
          Length = 3469

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 299  RSAPTQRERSQRANQKRKTAQRHD*FKAKTQS**HAQQHQNETVGIGT 156
            + A    + SQ+  Q++   Q H   + + Q   HAQQH  +  G G+
Sbjct: 3058 QKAEEANDHSQQQQQQQHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGS 3105


>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
            isoform C protein.
          Length = 3604

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 299  RSAPTQRERSQRANQKRKTAQRHD*FKAKTQS**HAQQHQNETVGIGT 156
            + A   +  SQ+  Q++   Q H   + + Q   HAQQH  +  G G+
Sbjct: 3193 QKAEEAKHHSQQQQQQQHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGS 3240


>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
            isoform B protein.
          Length = 3604

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 299  RSAPTQRERSQRANQKRKTAQRHD*FKAKTQS**HAQQHQNETVGIGT 156
            + A   +  SQ+  Q++   Q H   + + Q   HAQQH  +  G G+
Sbjct: 3193 QKAEEAKHHSQQQQQQQHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGS 3240


>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
            isoform A protein.
          Length = 3604

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 299  RSAPTQRERSQRANQKRKTAQRHD*FKAKTQS**HAQQHQNETVGIGT 156
            + A   +  SQ+  Q++   Q H   + + Q   HAQQH  +  G G+
Sbjct: 3193 QKAEEAKHHSQQQQQQQHQQQHHAQQQQQQQQQHHAQQHHPQMPGTGS 3240


>AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA
            protein.
          Length = 1712

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -2

Query: 329  HHVRDGYANXRSAPTQRERSQRANQKRKTAQR 234
            HH RD + + R    +RER + A +K+K  Q+
Sbjct: 995  HHHRDYHHHHRERERERERERSALKKKKHQQQ 1026


>AE014134-833|AAN10518.3| 1491|Drosophila melanogaster CG34126-PB
            protein.
          Length = 1491

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 196  TLNNIKMKPLELAREIYSRNPT 131
            T +N+K  P+E+A E+Y   P+
Sbjct: 1150 TTDNMKASPVEVASEVYEEQPS 1171


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,267
Number of Sequences: 53049
Number of extensions: 211702
Number of successful extensions: 569
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 859222404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)