Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3c06
         (369 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   0.57 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   0.57 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.75 
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    21   4.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   7.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    20   7.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   7.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   7.0  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 248 NAMVFDETNKNLKFIHNSISICLNRCINL 334
           N+++F    K L  + + +  CL+ C NL
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 248 NAMVFDETNKNLKFIHNSISICLNRCINL 334
           N+++F    K L  + + +  CL+ C NL
Sbjct: 262 NSVLFQNVYKPLPIVLSIVKNCLSYCFNL 290


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 295 QQHQHMFKSLYKFNYN 342
           +Q +H F  +YK+ YN
Sbjct: 33  RQERHSFYKIYKYTYN 48


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 277 KFKIYSQQHQHMFKSLYKFNYNKTLCTIK 363
           +FK+   + + M  SL   NY++  C I+
Sbjct: 34  QFKVLGHRQRAMEISLTTGNYSRLACEIQ 62


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 364 FLLYIMFYC 338
           FLL+ +FYC
Sbjct: 14  FLLFYLFYC 22


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = -3

Query: 367 FFLLYIMFYCN*IYTAI 317
           FF++ +++ CN  Y  +
Sbjct: 278 FFIVNVLYICNQCYNTV 294


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 121 VQHVVLQTNEL 89
           V+H+++QTN+L
Sbjct: 164 VEHILVQTNKL 174


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = -3

Query: 121 VQHVVLQTNEL 89
           V+H+++QTN+L
Sbjct: 164 VEHILVQTNKL 174


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -3

Query: 364 FLLYIMFYC 338
           FLL+ +FYC
Sbjct: 14  FLLFYLFYC 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,801
Number of Sequences: 336
Number of extensions: 1626
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)