Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3c01
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.81 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.9  
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    25   2.5  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.7  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   10.0 

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 513  LIWSWKKFS*WYGVAGSAMSSV 448
            L W+WK  S W G+ G A++ +
Sbjct: 2754 LEWNWKSKSLWLGMIGGALTGL 2775


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 9    KSNQNKFCSVYDCGSSAK-VRSNRYDDTNFINE 104
            K++  +F    DC   A  + SN Y  TN+INE
Sbjct: 3003 KNSLMRFECCIDCSQDASSITSNSYKVTNWINE 3035


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 72  NRYDDTNFINESRCQL 119
           N  DDT F+ ESRC L
Sbjct: 59  NTPDDTQFLTESRCGL 74


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +2

Query: 581 YPKALEGPENRRVTVWCANDY--LGTSRHPTVQDAAVNAIKSYGTGAGGTRNIAGN 742
           +P  ++G    R+ +   + +   G   H       VNA+ + G G GG+  + G+
Sbjct: 474 HPDNIDGDRMLRLAMASRHHHHRAGLHHHDLASGVVVNAVLAAGGGGGGSGCVNGS 529


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 286 VEPSVREKLWCDPDEAVRKLLPDY 357
           V P   ++  C+P E+ ++LLP +
Sbjct: 770 VPPMGEDEAHCEPAESAKRLLPKF 793


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -3

Query: 69 NVLLLSSRSHTHYKIYFD 16
          NVLLL    H  Y  YFD
Sbjct: 31 NVLLLLFHKHPRYIAYFD 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,992
Number of Sequences: 2352
Number of extensions: 16514
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)