Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3b07
         (414 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   3.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   4.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.3  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   8.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 239 IKGPRFPGEKSTHRA*GKRSHQTGSPTP 322
           + G ++P  K+ H+  G  S++   P P
Sbjct: 367 VSGTKYPILKAIHQTLGGSSNEIVEPVP 394


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 385 YIIVYATGSSPLVARV*ITCPWCW 314
           Y+   ATG +  V    I CP  W
Sbjct: 272 YLYYVATGKASFVTVPMIVCPIVW 295


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 385 YIIVYATGSSPLVARV*ITCPWCW 314
           Y+   ATG +  V    I CP  W
Sbjct: 272 YLYYVATGKASFVTVPMIVCPIVW 295


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 6/24 (25%), Positives = 16/24 (66%)
 Frame = -2

Query: 398 IFFNLYHSLCDWIIALGRTCVDHL 327
           IFF++++     ++ +G+ CV ++
Sbjct: 180 IFFDMFYQHHKIVLDMGKNCVTYV 203


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 366 LDHRPWSHVCRSPAHG 319
           ++ RPWS  C  P  G
Sbjct: 352 VNERPWSLYCGEPPCG 367


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +2

Query: 14  DAAQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQRK 127
           D   E  E      SKN +++    W+    EE V+ +
Sbjct: 95  DDQNESLEASVNENSKNGDDDEGHEWQADVSEEAVRAR 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,912
Number of Sequences: 336
Number of extensions: 2155
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)