Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3b07
         (414 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   0.82 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   1.4  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   1.4  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   4.4  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    23   5.8  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    22   7.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   7.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    22   7.7  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 0.82
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 2    FQFKDAAQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 121
            F     A EGRE       +    + RIR    Q++EVV+
Sbjct: 1093 FSASSEATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 70  RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPRMRNCTRK 195
           RRR+  +A   RRR  P+ +     TTR     P  R  T++
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 46  PNSLKKHRRRRKDPVAAKPRRR 111
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 29  GREGFGQTASKNTEEEGRIR 88
           G  GFGQ  + NT+ EG ++
Sbjct: 505 GIVGFGQYCAANTDPEGAMK 524


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 46  PNSLKKHRRR-RKDPVAAKPRRRSGPKEKFVTS 141
           PN L++      K+PV  KP+    P+ + VT+
Sbjct: 125 PNDLQQEGETLNKEPVETKPQESEPPEMQEVTA 157


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 213 LACTVGLPCTVSHTWVYQTTPGCSTCH 133
           L C + +P T S+T++ +   G   CH
Sbjct: 143 LLCVLAVPFTPSYTFMRRWVFGKLLCH 169


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 162 DKPTYEKLYKEVPQYKLITPAVVSERLKV 248
           + P+ + L KEVP  K+      S  LKV
Sbjct: 633 ETPSDQPLIKEVPMNKIQVGGAPSPNLKV 661


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 143 QLVTNFSFGP 114
           Q+ TNFSFGP
Sbjct: 338 QVYTNFSFGP 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,666
Number of Sequences: 2352
Number of extensions: 9478
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)