Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3b03
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 44 2e-05
01_06_1245 - 35693949-35694038,35694974-35695070,35695170-356952... 44 3e-05
05_03_0443 + 14057080-14057201,14058566-14058698,14058758-140587... 43 7e-05
08_02_0433 - 17114880-17114972,17115053-17115149,17115244-171153... 42 2e-04
01_06_0658 - 30942890-30943054,30943159-30943266,30943448-309435... 28 2.1
09_02_0586 + 10948079-10948283,10948506-10948615 27 2.8
08_02_0986 + 23328056-23328145,23328289-23329227,23329313-233295... 27 2.8
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 27 2.8
05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566... 27 2.8
03_06_0065 - 31399791-31399874,31399956-31400165,31400407-314005... 27 2.8
02_03_0010 - 13914705-13915318,13915536-13915860,13915907-13916077 27 2.8
01_06_1465 - 37551996-37552061,37552206-37552277,37552373-37552987 27 2.8
01_01_1023 - 8070122-8070808 27 3.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 5.0
06_01_0597 - 4312592-4313893 27 5.0
01_05_0227 - 19512866-19514983 27 5.0
10_08_0438 + 17919355-17919391,17919491-17919544,17919928-179201... 26 6.6
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 26 6.6
08_02_0577 + 18890801-18891600,18892033-18892911,18903566-189037... 26 8.7
07_03_1137 - 24220597-24220619,24220694-24221414,24221513-242217... 26 8.7
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 26 8.7
02_05_1045 + 33739287-33739991 26 8.7
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 66 DEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEA 245
DE ++LG +E+V + QV+ + EM+SHEEK ++ + Q++ L + R+E
Sbjct: 399 DEAISLGNKENVTVQQVKQYCEMESHEEKAHKLMMQSKINETRDVMKKKASELDKMRMER 458
Query: 246 AK 251
K
Sbjct: 459 GK 460
>01_06_1245 -
35693949-35694038,35694974-35695070,35695170-35695232,
35696079-35696232,35696303-35696489,35697001-35697314,
35698079-35698220,35698445-35698656,35699068-35699244,
35699589-35699628,35700056-35700155,35701731-35701804
Length = 549
Score = 44.0 bits (99), Expect = 3e-05
Identities = 17/37 (45%), Positives = 30/37 (81%)
Frame = +3
Query: 69 EIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 179
E ++LG +E+V +AQV+ + EM+SHEEK+++ V Q++
Sbjct: 146 EAISLGNKENVTVAQVKQYCEMESHEEKLHKLVMQSK 182
>05_03_0443 +
14057080-14057201,14058566-14058698,14058758-14058797,
14059175-14059398,14059904-14059976,14060364-14060614,
14060892-14061060,14061307-14061611,14062023-14062209,
14062311-14062464,14063186-14063248,14063337-14063433,
14063530-14063619
Length = 635
Score = 42.7 bits (96), Expect = 7e-05
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 66 DEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQXXXXXXXXXXXXXXLQRERLEA 245
DE + LG +E+V + QV+ + EM+SHEEK ++ + Q++ L + ++E
Sbjct: 225 DEAICLGNKENVTVQQVKQYCEMESHEEKAHKLMMQSKINETRDVMKKKASELDKMKMER 284
Query: 246 AK 251
K
Sbjct: 285 GK 286
>08_02_0433 -
17114880-17114972,17115053-17115149,17115244-17115306,
17115765-17115918,17115992-17116178,17116567-17116871,
17117638-17117803,17118261-17118652,17119032-17119208,
17119565-17119604,17119762-17119809,17122393-17122428,
17122832-17123104
Length = 676
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +3
Query: 3 YCVQLTETEXXXXXXXXXXXXDEIVALGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQX 182
YC L + DE ++LG +E V + QV+ + EMDS EE Y+ + Q +
Sbjct: 245 YCPSLDDDGVCKTAFELIFAFDEAISLGNKEKVTVQQVKEYCEMDSVEEMEYKQMMQEKI 304
Query: 183 XXXXXXXXXXXXXLQRERLEAAKRGQ 260
+++ R+E K +
Sbjct: 305 KETKDFMKKKVIEIEKTRMEKGKHNK 330
>01_06_0658 -
30942890-30943054,30943159-30943266,30943448-30943598,
30943683-30943780,30943869-30944020,30944298-30944403,
30944499-30944588,30944668-30944813,30945396-30945695,
30945953-30946038,30947260-30947996
Length = 712
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 202 CANALRSCSVRDWRRPNVASRRAHRCPSAVALVARRC 312
C N++ S++D PN+ H C +A++A++C
Sbjct: 630 CRNSMYMGSLKDCIDPNLMDLYPHDCVYKMAMLAKQC 666
>09_02_0586 + 10948079-10948283,10948506-10948615
Length = 104
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = -3
Query: 258 GHVWPPPISHAATP*RVRACGSLPRVLGSALRLDKSFPRESPFQQTNGPALD*RFLCTQE 79
GH WPPP+ +T RV G ALR R P + R LC
Sbjct: 42 GHDWPPPVKDDSTACRVDVVPYPGHQQGLALRQCGQCDRTGPPKYVYYVTKPDRLLCALR 101
Query: 78 R 76
R
Sbjct: 102 R 102
>08_02_0986 +
23328056-23328145,23328289-23329227,23329313-23329570,
23330384-23330692
Length = 531
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 270 SAAAGHVWPPPISHAATP 217
S A HVW PP SH+ +P
Sbjct: 56 STGATHVWLPPPSHSVSP 73
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 331 SDGDDEDIVELPKPLPKDICERGGWPRLAASNLSR 227
++GD ED V+L ++ + G WPR++ S R
Sbjct: 78 AEGDKED-VDLAVKAAREAFDHGEWPRMSGSERGR 111
>05_07_0066 +
27453611-27453627,27454729-27454872,27455998-27456690,
27457700-27458111,27458220-27458297,27458938-27458953,
27459038-27459192
Length = 504
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -3
Query: 333 IQMETTRTSSSYQSHCRRTSVSAAAGHVWPPPISHAATP*RVRACGSLPRVLGSALRLDK 154
+ M +T S YQ H AA H P S AAT + LPR+ + R +K
Sbjct: 337 VVMALAKTDSKYQHHTGHGGHGQAADHHGPSSSSKAATAAAQKI--ELPRIYTTLSRKEK 394
>03_06_0065 -
31399791-31399874,31399956-31400165,31400407-31400526,
31401166-31401225,31401670-31401879,31402512-31402587,
31403010-31403173,31403254-31403316,31403640-31403727,
31403810-31404460,31405102-31405149,31405334-31405902
Length = 780
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -3
Query: 267 AAAGHVWPPPISHAATP*RVRACGSLPRVLGSALRLDKSFPRESPFQQTNGPA 109
++A VW P + + ++P C S +++GS R +S P SP ++ P+
Sbjct: 295 SSAQSVWSPDL-YGSSP----RCASPEKIMGSQERSPRSSPLRSPVLRSKNPS 342
>02_03_0010 - 13914705-13915318,13915536-13915860,13915907-13916077
Length = 369
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 246 PPPISHAATP*RVRACGSLPRVLGSAL-RLDKSFPRESPFQQTNGPALD*RFLC 88
P P+S A TP R R C +L +L + L L K Q ALD +C
Sbjct: 64 PRPVSEACTPSRRRKCLALTEMLAAKLDLLMKRLDDHDKRPQGTVKALDSHVMC 117
>01_06_1465 - 37551996-37552061,37552206-37552277,37552373-37552987
Length = 250
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = -3
Query: 315 RTSSSYQSHCRRTSVSAAAGHVWPPPISHAATP*RVRACGSLPRVLGSALRLDKSFPRES 136
RT+ V+AAAG V PP + AA P V G+ G+ + L+ RE
Sbjct: 76 RTAEEVWKEITGAGVAAAAGGVVPPAAAAAAAPAVVAGAGA---GTGAEMTLEDFLAREG 132
Query: 135 PFQQTNGPALD 103
++ D
Sbjct: 133 AVKEDEAVVTD 143
>01_01_1023 - 8070122-8070808
Length = 228
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 178 KNARQRTACANALRSCSVRDWRRPNVASRRAHRCPSAVALVARRCP 315
K R A A AL C R +P + AH CPSA+ + P
Sbjct: 16 KLRRPSRAAAAALCPCKGRGAPKPPPVAVIAHECPSAMRALVVEVP 61
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 274 CERGGWPRLA 245
CERGGWP LA
Sbjct: 141 CERGGWPSLA 150
>06_01_0597 - 4312592-4313893
Length = 433
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -3
Query: 282 RTSVSAAAGHVWPPPISHAATP*RVRACGS 193
RTS +A AG V P+ HAA R RA S
Sbjct: 303 RTSTAATAGEVVSSPVGHAAR--RARAATS 330
>01_05_0227 - 19512866-19514983
Length = 705
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 242 LQSLTLQLLSAFAHAVRCLAFLG 174
LQ++TL +AF H +C+ LG
Sbjct: 542 LQTITLTFCTAFKHLPQCITLLG 564
>10_08_0438 +
17919355-17919391,17919491-17919544,17919928-17920186,
17920396-17920484,17920645-17920775,17920900-17920946,
17921029-17921137,17921217-17921303,17921521-17921692,
17921837-17922309,17922402-17922463,17922537-17922639,
17923535-17923636
Length = 574
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +3
Query: 69 EIVALGYRESVNLAQVRSFVEMDSHEEK 152
E+VA+ ++VNL + ++ + + S +EK
Sbjct: 376 EVVAISEEDAVNLVEAKTSINLHSDQEK 403
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -2
Query: 319 DEDIVELPKPLPKDICERGGWPRLAASNLS 230
D ++ PK L KD E WPR AASN S
Sbjct: 3 DPPALKRPK-LEKDDYESAYWPRPAASNAS 31
>08_02_0577 +
18890801-18891600,18892033-18892911,18903566-18903707,
18903726-18904355
Length = 816
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 68 RDCRSWVQRKRQSSAG 115
R CR+WV R ++ +AG
Sbjct: 215 RSCRAWVDRAKEKNAG 230
>07_03_1137 -
24220597-24220619,24220694-24221414,24221513-24221731,
24221805-24222505,24223127-24223376
Length = 637
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 274 CERGGWPRLA 245
CERGGWP LA
Sbjct: 186 CERGGWPVLA 195
>04_03_0927 +
20871487-20871903,20872667-20872812,20873204-20873301,
20873378-20873572,20873670-20873797,20873892-20874050,
20875119-20875223,20875449-20875559,20875653-20875790,
20875909-20876091,20876362-20876517,20876615-20876738,
20876820-20877030,20877614-20877729,20877828-20878053,
20878218-20878311,20879198-20879275,20879822-20879971,
20880086-20880292,20880584-20880788,20880990-20881096
Length = 1117
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 164 GLINLFLVRVHFNKRTDLR*IDA 96
GLI++FL H NK +LR +DA
Sbjct: 914 GLIDIFLSIFHENKTKELRMLDA 936
>02_05_1045 + 33739287-33739991
Length = 234
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 331 SDGDDEDIVELPKPLPKDICERG 263
S GD +V +P PLP+ + +RG
Sbjct: 17 SGGDHPTLVGVPLPLPRRLVDRG 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,664,717
Number of Sequences: 37544
Number of extensions: 166969
Number of successful extensions: 673
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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