Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3b03
         (338 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    26   0.34 
AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    23   2.4  
AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding pr...    23   2.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   2.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   3.1  
AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    23   4.2  
AY745211-1|AAU93478.1|   86|Anopheles gambiae cytochrome P450 pr...    22   5.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   7.3  
AY752898-1|AAV30072.1|   72|Anopheles gambiae peroxidase 5A prot...    21   9.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    21   9.6  

>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 220 SCSVRDWRRPNVASRRAHRC 279
           SC VR+  +P+  SRR  RC
Sbjct: 220 SCKVREAPKPSAESRRCFRC 239


>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 307 VELPKPLPKDICERGGW 257
           V   +P  KD+CER  W
Sbjct: 125 VRCTRPKGKDVCERAFW 141


>AF437885-1|AAL84180.1|  157|Anopheles gambiae odorant binding
           protein protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 307 VELPKPLPKDICERGGW 257
           V   +P  KD+CER  W
Sbjct: 125 VRCTRPKGKDVCERAFW 141


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 217 RSCSVRDWRRPNVASRRAHR 276
           R  S R WR P+VA+   HR
Sbjct: 193 RDDSARGWRVPDVATLSDHR 212


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 41   GLQFAI-CFRRDCRSWVQRKRQSSAGPFV 124
            GL F I C+R++ + WV       +G FV
Sbjct: 1038 GLIFGIFCYRKELKVWVHSGLCYKSGTFV 1066


>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 270 SAAAGHVWPPPISHAATP*RVRACGSLPRV 181
           ++  GH  P  +SH A   +VR  G L  +
Sbjct: 77  ASTGGHYNPDKVSHGAPNDQVRHVGDLGNI 106


>AY745211-1|AAU93478.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +1

Query: 238 WRRPNVASRRAHRCPSA---VALVARRC 312
           W+R N A     R PSA    A+ AR C
Sbjct: 7   WQRTNAAESSTGRTPSASLPFAIGARSC 34


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 253 VASRRAHRCPSAVALVAR 306
           +AS + HR P+A+  VAR
Sbjct: 14  IASCKRHRDPNAIQRVAR 31


>AY752898-1|AAV30072.1|   72|Anopheles gambiae peroxidase 5A
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 90  RESVNLAQVRSFVEMDSHEEKIYQAVRQ 173
           RE   LAQ  S V    ++EK++Q  R+
Sbjct: 41  REHNRLAQQLSIVHPLWNDEKVFQEARR 68


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 277  ICERGGWPRLAASNL 233
            +C RG WP     NL
Sbjct: 1128 LCNRGQWPSWMKQNL 1142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 307,302
Number of Sequences: 2352
Number of extensions: 5360
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)