Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3b01
(425 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P11040 Cluster: ECORI-T site protein ETS; n=5; Nucleopo... 159 2e-38
UniRef50_UPI000159708B Cluster: ets; n=1; Antheraea pernyi nucle... 42 0.007
UniRef50_Q7VQI6 Cluster: Cell division protein FtsQ; n=2; Candid... 34 1.1
UniRef50_Q7RAS7 Cluster: Putative uncharacterized protein PY0642... 34 1.4
UniRef50_Q30PE9 Cluster: Transcriptional regulator, MerR family;... 33 3.3
UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI058... 33 3.3
UniRef50_Q73R17 Cluster: HD domain protein; n=1; Treponema denti... 32 4.3
UniRef50_Q1RLA6 Cluster: Zinc finger protein; n=1; Ciona intesti... 32 4.3
UniRef50_A7DMF5 Cluster: ABC transporter related precursor; n=1;... 32 4.3
UniRef50_O67491 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_Q22N09 Cluster: Putative uncharacterized protein; n=1; ... 32 5.7
UniRef50_A0EIN2 Cluster: Chromosome undetermined scaffold_99, wh... 32 5.7
UniRef50_P35749 Cluster: Myosin-11; n=123; Eukaryota|Rep: Myosin... 32 5.7
UniRef50_A7GLT8 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_A4CLA6 Cluster: Sensor protein; n=1; Robiginitalea bifo... 31 7.5
UniRef50_A3DGH7 Cluster: Viral A-type inclusion protein repeat c... 31 7.5
UniRef50_A0DV32 Cluster: Chromosome undetermined scaffold_65, wh... 31 7.5
UniRef50_Q5CSJ7 Cluster: RAD50; n=3; Cryptosporidium|Rep: RAD50 ... 31 9.9
UniRef50_Q2TAA8 Cluster: Translin-associated factor X-interactin... 31 9.9
>UniRef50_P11040 Cluster: ECORI-T site protein ETS; n=5;
Nucleopolyhedrovirus|Rep: ECORI-T site protein ETS -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 88
Score = 159 bits (387), Expect = 2e-38
Identities = 74/81 (91%), Positives = 80/81 (98%)
Frame = +3
Query: 18 MIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVK 197
M+ERTVTRWHL+SDNVL KIGEVAQRL+YYLQEYANLEMQIEEEIKYME+DDGEEIDT+K
Sbjct: 1 MMERTVTRWHLVSDNVLFKIGEVAQRLDYYLQEYANLEMQIEEEIKYMEVDDGEEIDTIK 60
Query: 198 TFLRNSMSTAEQRDLYALALK 260
TFLRNSMST+EQRDLYALALK
Sbjct: 61 TFLRNSMSTSEQRDLYALALK 81
>UniRef50_UPI000159708B Cluster: ets; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: ets - Antheraea pernyi
nucleopolyhedrovirus
Length = 89
Score = 41.5 bits (93), Expect = 0.007
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 42 WHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMS 221
W L D+ L KI A+ L L E+A + +I EI+ M + D + +++ FL S
Sbjct: 3 WQQLPDDELHKICGAARNLTARLAEHARVHERITAEIRSMGVRDSD--GSIREFLYRSEC 60
Query: 222 TAEQRDLYALALK 260
A QR+ +ALA++
Sbjct: 61 GAAQREAHALAVR 73
>UniRef50_Q7VQI6 Cluster: Cell division protein FtsQ; n=2;
Candidatus Blochmannia|Rep: Cell division protein FtsQ -
Blochmannia floridanus
Length = 276
Score = 34.3 bits (75), Expect = 1.1
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +3
Query: 30 TVTRWHLLSDN-VLLKIG--EVAQRLNYYLQEYANLEMQIEEEIKYMEIDD 173
T W L+ DN V LK+G + +RL+Y+++ Y L +++E+ KY++ D
Sbjct: 192 TCYTWQLVLDNNVCLKLGCVNLIERLHYFIKVYPFLVKEMDEKNKYIDYVD 242
>UniRef50_Q7RAS7 Cluster: Putative uncharacterized protein PY06422;
n=13; Eukaryota|Rep: Putative uncharacterized protein
PY06422 - Plasmodium yoelii yoelii
Length = 2649
Score = 33.9 bits (74), Expect = 1.4
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 MIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQE-YANLEMQIEEEIKYMEIDDGEEIDTV 194
M E+ +++L DN L KI E N + Y NL ++ E KY+ +++ EID++
Sbjct: 1532 MTEKNQDDYNILEDNNL-KINETNSMFNNRKENIYTNL---LKNENKYVNVNNIFEIDSI 1587
Query: 195 KTFLRNSMSTAEQRDLY 245
+ L+N S A + +
Sbjct: 1588 RANLQNMFSNANGNESF 1604
>UniRef50_Q30PE9 Cluster: Transcriptional regulator, MerR family;
n=1; Thiomicrospira denitrificans ATCC 33889|Rep:
Transcriptional regulator, MerR family - Thiomicrospira
denitrificans (strain ATCC 33889 / DSM 1351)
Length = 226
Score = 32.7 bits (71), Expect = 3.3
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +3
Query: 87 AQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMST 224
A++L + Y+++ ++I E I+YM+ + G + +KT L+N S+
Sbjct: 31 AKKLKSNVHRYSDIHVEILEYIRYMKQEMGSSNEELKTMLKNKNSS 76
>UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI0585c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFI0585c - Plasmodium falciparum (isolate 3D7)
Length = 1568
Score = 32.7 bits (71), Expect = 3.3
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +3
Query: 48 LLSDNVLLKIGEVAQRLNYYLQEYA--NLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMS 221
L +DN+ K+ NYY Q+YA NL + K + D ++ +T+K ++ N++S
Sbjct: 693 LTNDNIKKKLKNDENYKNYYFQKYAAFNLTESLTPINKLLHKDFEDDCNTLKQYIINNLS 752
Query: 222 TAEQRD 239
+D
Sbjct: 753 RHMAQD 758
>UniRef50_Q73R17 Cluster: HD domain protein; n=1; Treponema
denticola|Rep: HD domain protein - Treponema denticola
Length = 208
Score = 32.3 bits (70), Expect = 4.3
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +3
Query: 108 LQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNS 215
L+EYA+ E+ IE+ I + I D EID TFL +S
Sbjct: 64 LKEYADFEVNIEKVISMLLIHDIVEIDAGDTFLYSS 99
>UniRef50_Q1RLA6 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 1243
Score = 32.3 bits (70), Expect = 4.3
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 9 SARMIERTVTRWHLLSDNVLLK--IGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEE 182
S ++ E L+D + LK I E+ ++ ++ NL +QI+E K ++ DDGE
Sbjct: 920 SLKVTELETNTQSQLNDIISLKEKITELLFDKDHLWKDSQNLRLQIDELEKSVDHDDGET 979
Query: 183 IDTV 194
+DTV
Sbjct: 980 LDTV 983
>UniRef50_A7DMF5 Cluster: ABC transporter related precursor; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: ABC
transporter related precursor - Candidatus
Nitrosopumilus maritimus SCM1
Length = 276
Score = 32.3 bits (70), Expect = 4.3
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +3
Query: 114 EYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQRDLYA 248
EYAN I+E K +EI G E DT+ F MST E ++YA
Sbjct: 229 EYANRVAVIKEGQKILEI--GVEGDTIVDFQTGDMSTEEIMEMYA 271
>UniRef50_O67491 Cluster: Putative uncharacterized protein; n=1;
Aquifex aeolicus|Rep: Putative uncharacterized protein -
Aquifex aeolicus
Length = 300
Score = 31.9 bits (69), Expect = 5.7
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +3
Query: 21 IERTVTRWHLLSDNVLLKIGEV-AQRLNYYLQEYANLEMQIEEEIKYM-EIDDGEEIDTV 194
+E R L N K+GE+ ++LN L+EY NL +++E+ +K + + + + +T+
Sbjct: 196 LENISLRVEKLVANADKKLGELEVKKLNEVLEEYKNLAVEVEKFVKNLSNLSEKVDRETL 255
Query: 195 KTF--LRNSM-STAEQ 233
+ F L NS+ T+E+
Sbjct: 256 RKFEELINSLEKTSEE 271
>UniRef50_Q22N09 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 560
Score = 31.9 bits (69), Expect = 5.7
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = +3
Query: 66 LLKIGEVAQRLNYYLQEYANL-----EMQ-----IEEEIKYMEIDDGEEIDTVKTFLRNS 215
++++ E + L+ Y+QEY NL E+Q I ++K M ++ E +DT+ T R +
Sbjct: 397 IIRLEESKKILHQYIQEYQNLAAEEQELQKSTTKIRSDVKIMNEEEPEILDTLNTLSRRN 456
Query: 216 MSTAEQRDLYALAL 257
S Q ++ L +
Sbjct: 457 NSEILQLKIFKLKM 470
>UniRef50_A0EIN2 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 310
Score = 31.9 bits (69), Expect = 5.7
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +3
Query: 87 AQRLNYYLQEYANLEMQIEEEIKYMEIDDGEE 182
A LNYYLQ+ L++++E+E+K ++I E+
Sbjct: 32 AVALNYYLQQKKKLDIELEKEMKKLQIQFDEK 63
>UniRef50_P35749 Cluster: Myosin-11; n=123; Eukaryota|Rep: Myosin-11 -
Homo sapiens (Human)
Length = 1972
Score = 31.9 bits (69), Expect = 5.7
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 DNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSM-STAEQ 233
+N L KI E+ ++ LQE + E + + + D GEE++ +KT L +++ STA Q
Sbjct: 1107 NNALKKIRELEGHISD-LQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQ 1165
Query: 234 RDLYA 248
++L A
Sbjct: 1166 QELRA 1170
>UniRef50_A7GLT8 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
Putative uncharacterized protein - Bacillus cereus
subsp. cytotoxis NVH 391-98
Length = 382
Score = 31.5 bits (68), Expect = 7.5
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +3
Query: 9 SARMIERTVTRWHLLSDNVLL--KIGEVAQRLNYYLQEYANLEMQIEEEIKY-MEIDDGE 179
SA +IE T+ +++L + V+L K +V + L E+ L+ Q E + ++I DGE
Sbjct: 283 SANIIEETL-KFNLEDNEVVLVVKSKDVEETLELLSNEHVQLKAQPRESVVIQIKIKDGE 341
Query: 180 EIDTVKT 200
+ D +KT
Sbjct: 342 QQDKIKT 348
>UniRef50_A4CLA6 Cluster: Sensor protein; n=1; Robiginitalea
biformata HTCC2501|Rep: Sensor protein - Robiginitalea
biformata HTCC2501
Length = 576
Score = 31.5 bits (68), Expect = 7.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 75 IGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDG 176
+GE+ QR + +++ LE Q+E E++ ++ D G
Sbjct: 541 LGEIGQRFDELAEDFPRLEAQLEREVEKLKKDQG 574
>UniRef50_A3DGH7 Cluster: Viral A-type inclusion protein repeat
containing protein precursor; n=2; Clostridium
thermocellum ATCC 27405|Rep: Viral A-type inclusion
protein repeat containing protein precursor -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 1102
Score = 31.5 bits (68), Expect = 7.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 72 KIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEID 188
K+ E+ + ++ Y E +L+ QIEE+ K E D+ E+D
Sbjct: 254 KLEEIEEEIDGYKNEIKDLKKQIEEKKKEAEDDESGEVD 292
>UniRef50_A0DV32 Cluster: Chromosome undetermined scaffold_65, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_65,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 454
Score = 31.5 bits (68), Expect = 7.5
Identities = 13/34 (38%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +3
Query: 57 DNVLLKIGEVAQRLNYYLQEYANLEMQIEE-EIK 155
D+ L+++ E Q++NYY + NLE++++E E+K
Sbjct: 197 DSKLIELHEAKQQVNYYKNQCINLEVKVKETEVK 230
>UniRef50_Q5CSJ7 Cluster: RAD50; n=3; Cryptosporidium|Rep: RAD50 -
Cryptosporidium parvum Iowa II
Length = 1062
Score = 31.1 bits (67), Expect = 9.9
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 66 LLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTVKTFLRNSMSTAEQ 233
+L I E QRL + +QE N EIK +EI+ + K FL+NS+ EQ
Sbjct: 639 ILIIDENIQRLEFEIQEVTNKIQFANLEIKNLEIEHCKR----KDFLKNSIEELEQ 690
>UniRef50_Q2TAA8 Cluster: Translin-associated factor X-interacting
protein 1; n=24; Mammalia|Rep: Translin-associated
factor X-interacting protein 1 - Homo sapiens (Human)
Length = 658
Score = 31.1 bits (67), Expect = 9.9
Identities = 18/77 (23%), Positives = 39/77 (50%)
Frame = +3
Query: 15 RMIERTVTRWHLLSDNVLLKIGEVAQRLNYYLQEYANLEMQIEEEIKYMEIDDGEEIDTV 194
+M + +TR + +N+ G+V R ++ +QE N ++Q E++ + E
Sbjct: 232 KMTRQDLTRTQMELNNMKANFGDVVPRRDFEMQEKTNKDLQ--EQLDTLRASYEEVRKEH 289
Query: 195 KTFLRNSMSTAEQRDLY 245
+ ++ MST ++RD +
Sbjct: 290 EILMQLHMSTLKERDQF 306
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,022,166
Number of Sequences: 1657284
Number of extensions: 4422071
Number of successful extensions: 14995
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 14634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14991
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -