Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a22
(768 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2) 143 1e-34
SB_2784| Best HMM Match : UCR_14kD (HMM E-Value=1.5) 132 4e-31
SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9) 121 6e-28
SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9) 121 6e-28
SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2) 110 1e-24
SB_15619| Best HMM Match : RVT_1 (HMM E-Value=0.025) 86 3e-17
SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4) 76 3e-14
SB_8630| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_36468| Best HMM Match : DUF1643 (HMM E-Value=4.1) 38 0.012
SB_911| Best HMM Match : bZIP_1 (HMM E-Value=0.53) 34 0.15
SB_40601| Best HMM Match : VWA_CoxE (HMM E-Value=6.3) 33 0.19
SB_58627| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11) 31 1.4
SB_56748| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_14555| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_57726| Best HMM Match : YiaAB (HMM E-Value=0.56) 30 2.4
SB_16711| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2) 30 2.4
SB_37544| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_52941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_53998| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_53960| Best HMM Match : RNA_pol_Rpb2_3 (HMM E-Value=5.2) 28 9.5
SB_52734| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_52132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_42778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_34773| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_11623| Best HMM Match : ABC1 (HMM E-Value=0) 28 9.5
SB_1675| Best HMM Match : ig (HMM E-Value=5.6e-05) 28 9.5
SB_53726| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_7224| Best HMM Match : TIL (HMM E-Value=8.2) 28 9.5
>SB_34320| Best HMM Match : Ponericin (HMM E-Value=1.2)
Length = 303
Score = 143 bits (347), Expect = 1e-34
Identities = 80/237 (33%), Positives = 125/237 (52%), Gaps = 1/237 (0%)
Frame = -3
Query: 709 FFGRLIKVLKSHLSGGNKIRAFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRM 530
+F RL KVLK+ L+G N I A N W + +L Y G+++WT++E +T Y M
Sbjct: 16 YFRRLKKVLKAKLNGKNTIMAINTWAVSVLRYGAGVVKWTKTELENIDRKTRKRMTIYGM 75
Query: 529 HHPRSSVMRLYIPRKCGGRGILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPL 350
HPR++V RLY+PR+CGGRG++ +D + E L +Y K + + +KG+ L
Sbjct: 76 LHPRANVGRLYLPRRCGGRGLIGVEDCIHLEEKGLADYVHKSEEPLL--LAVRNKGI--L 131
Query: 349 SLANGNWKRLKVESISD-RITVWRSKELHGRFYRALTGPDVDQLASVAWLRFSNLFGETE 173
+ R+ E + + R W+S LHG+F R ++ +S W+ NL ETE
Sbjct: 132 RVEEQQTARVLKEKLKEKRQEDWKSMPLHGQFLRQT--EEIRDESSRDWMTKGNLKKETE 189
Query: 172 GFIFAIMDEVIMTNNYRKYILKDGTVDICRACHRPGESIRHIVSGCSRFANGEYLHR 2
G I A D+ + TN + I K +CR C E++ +++ CS+ A +Y HR
Sbjct: 190 GLITAAQDQALRTNAVKAKIEKQQICPLCRMCGLKDETVNYLLCECSKMAQSQYKHR 246
>SB_2784| Best HMM Match : UCR_14kD (HMM E-Value=1.5)
Length = 413
Score = 132 bits (318), Expect = 4e-31
Identities = 74/233 (31%), Positives = 121/233 (51%), Gaps = 1/233 (0%)
Frame = -3
Query: 709 FFGRLIKVLKSHLSGGNKIRAFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRM 530
+F RL KVLK+ L+G N I A N W + +L Y G+++WT++E +T Y M
Sbjct: 187 YFRRLKKVLKAKLNGKNTIMAINTWAVSVLRYGAGVVKWTKTELENIDRKTRKRMTIYGM 246
Query: 529 HHPRSSVMRLYIPRKCGGRGILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPL 350
HPR++V LY+PR+CGGRG++ +D + E L +Y K + + ++G+ L
Sbjct: 247 LHPRANVGCLYLPRRCGGRGLIGVEDCKHLEEKGLADYVHKSEEPLL--LAVRNEGI--L 302
Query: 349 SLANGNWKRLKVESISD-RITVWRSKELHGRFYRALTGPDVDQLASVAWLRFSNLFGETE 173
+ R+ E + + R W++K LHG+F R ++ +S W+ NL ETE
Sbjct: 303 RVEEEQTARVLKEKLKEKRQEDWKTKPLHGQFLRQT--EEIRDESSWDWMTKGNLKKETE 360
Query: 172 GFIFAIMDEVIMTNNYRKYILKDGTVDICRACHRPGESIRHIVSGCSRFANGE 14
G I A D+ + N + I K +CR C +++ H++ CS+ A +
Sbjct: 361 GLITAAQDQALRANALKAKIEKQQISPLCRMCGLKDKTVNHLLCECSKMAQSQ 413
>SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 307
Score = 121 bits (292), Expect = 6e-28
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Frame = -3
Query: 649 AFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRMHHPRSSVMRLYIPRKCGGRG 470
A N W + +L Y G+++WT++E +T Y M HPR++V RL +PR+CGGRG
Sbjct: 2 AINTWAVSVLRYGAGVVKWTKTELENIDRKTRKRMTIYGMLHPRANVGRLCLPRRCGGRG 61
Query: 469 ILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISD-RI 293
++ +D + E L +Y K + + ++G+ L + R+ E + + R
Sbjct: 62 LIGVEDCIHLEEKGLADYVHKSEEPLL--LAVRNEGI--LRVEEEQTARVLKEKLKEKRQ 117
Query: 292 TVWRSKELHGRFYRALTGPDVDQLASVAWLRFSNLFGETEGFIFAIMDEVIMTNNYRKYI 113
W++K LHG+F R ++ +S W+ NL ETEG I A D+ + TN + I
Sbjct: 118 EDWKTKPLHGQFLRQT--EEIRDESSWDWMTKGNLKKETEGLITAAQDQALRTNAVKAKI 175
Query: 112 LKDGTVDICRACHRPGESIRHIVSGCSRFANGEYLHR 2
K +CR C E++ H++ CS+ A +Y HR
Sbjct: 176 EKRQISPLCRMCGLKDETVNHLLCECSKMAQSQYKHR 212
>SB_20028| Best HMM Match : Ponericin (HMM E-Value=2.9)
Length = 279
Score = 121 bits (292), Expect = 6e-28
Identities = 68/217 (31%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Frame = -3
Query: 649 AFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRMHHPRSSVMRLYIPRKCGGRG 470
A N W + +L Y G+++WT++E +T Y M HPR++V RL +PR+CGGRG
Sbjct: 2 AINTWAVSVLRYGAGVVKWTKTELENIDRKTRKRMTIYGMLHPRANVGRLCLPRRCGGRG 61
Query: 469 ILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISD-RI 293
++ +D + E L +Y K + + ++G+ L + R+ E + + R
Sbjct: 62 LIGVEDCIHLEEKGLADYVHKSEEPLL--LAVRNEGI--LRVEEEQTARVLKEKLKEKRQ 117
Query: 292 TVWRSKELHGRFYRALTGPDVDQLASVAWLRFSNLFGETEGFIFAIMDEVIMTNNYRKYI 113
W++K LHG+F R ++ +S W+ NL ETEG I A D+ + TN + I
Sbjct: 118 EDWKTKPLHGQFLRQT--EEIRDESSWDWMTKGNLKKETEGLITAAQDQALRTNAVKAKI 175
Query: 112 LKDGTVDICRACHRPGESIRHIVSGCSRFANGEYLHR 2
K +CR C E++ H++ CS+ A +Y HR
Sbjct: 176 EKRQISPLCRMCGLKDETVNHLLCECSKMAQSQYKHR 212
>SB_2167| Best HMM Match : Ponericin (HMM E-Value=3.2)
Length = 298
Score = 110 bits (265), Expect = 1e-24
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 1/211 (0%)
Frame = -3
Query: 631 MPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRMHHPRSSVMRLYIPRKCGGRGILNAKD 452
+P Y G+++WT++E +T Y M HPR++V LY+PR+CGGRG++ +D
Sbjct: 9 LPPHRYGAGVVKWTKTELENIDRKTRKRMTIYGMLHPRANVGHLYLPRRCGGRGLIGVED 68
Query: 451 LHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISD-RITVWRSK 275
+ E L +Y K + + ++G+ L + R+ E + + R W++K
Sbjct: 69 CIHLEEKGLADYVHKSEEPLL--LAVRNEGI--LRVEEEQTARVLKEKLKEKRQEDWKTK 124
Query: 274 ELHGRFYRALTGPDVDQLASVAWLRFSNLFGETEGFIFAIMDEVIMTNNYRKYILKDGTV 95
L+G+F R ++ +S W+ NL ETEG I A D + TN + K
Sbjct: 125 PLYGQFLRQT--EEIRDESSWDWMTKGNLKKETEGLITAAQDRALRTNAVKTKTEKQQIS 182
Query: 94 DICRACHRPGESIRHIVSGCSRFANGEYLHR 2
+CR C E++ H++ CS+ A +Y HR
Sbjct: 183 PLCRMCGLKDETVNHLLCECSKMAQSQYKHR 213
>SB_15619| Best HMM Match : RVT_1 (HMM E-Value=0.025)
Length = 485
Score = 85.8 bits (203), Expect = 3e-17
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Frame = -3
Query: 697 LIKVLKSHLSGGNKIRAFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRMHHPR 518
L KVLK+ L G N I A N W + +L Y G+++WT++E +T Y M HPR
Sbjct: 344 LKKVLKAKLKGKNTIMAINTWAVSVLRYGAGVVKWTKTELENIDRKTRKLMTIYGMLHPR 403
Query: 517 SSVMRLYIPRKCGGRGILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLAN 338
++V RLY+PR+CGGRG++ D + E L +Y K + + ++G+ L +
Sbjct: 404 ANVGRLYLPRQCGGRGLIGVVDCIHLEEKGLADYVHKSEEPLL--LAVRNEGI--LRVEE 459
Query: 337 GNWKRLKVESISD-RITVWRSKELH 266
R+ E + + R W++K LH
Sbjct: 460 EQTARVLKEKLKEKRQEDWKTKPLH 484
>SB_32862| Best HMM Match : CaM_binding (HMM E-Value=1.4)
Length = 202
Score = 76.2 bits (179), Expect = 3e-14
Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Frame = -3
Query: 649 AFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRMHHPRSSVMRLYIPRKCGGRG 470
A N W + +L Y G+++WT++E +T Y M HPR++V RLY+PR+CGGRG
Sbjct: 2 AINTWAVSVLRYGAGVVKWTKTELENIDRKTRKRMTIYGMLHPRANVGRLYLPRRCGGRG 61
Query: 469 ILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISD-RI 293
++ +D + E L +Y K + + ++G+ L + R+ E + + R
Sbjct: 62 LIGVEDCIHLEEKGLADYVHKSEEPLL--LAVRNEGI--LRVEEEQTARVLKEKLKEKRQ 117
Query: 292 TVWRSKELHGRFYRALTGPDV 230
W++K LH R +A PD+
Sbjct: 118 EDWKTKPLHDREIQA-RRPDI 137
>SB_8630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 72.9 bits (171), Expect = 3e-13
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Frame = -3
Query: 649 AFNGWVMPMLTYSFGILRWTQSEXXXXXXXXXXXLTAYRMHHPRSSVMRLYIPRKCGGRG 470
A N W + +L Y G+++WT++E +T Y M HPR++V RLY+PR+CGGRG
Sbjct: 2 AINTWAVSVLRYGAGVVKWTKTELENIDRKTRKLMTIYGMLHPRANVGRLYLPRQCGGRG 61
Query: 469 ILNAKDLHNREIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISD-RI 293
++ D + E L +Y K + + ++G+ L + R+ E + + R
Sbjct: 62 LIGVVDCIHLEEKGLADYVHKSEEPLL--LAVRNEGI--LRVEEEQTARVLKEKLKEKRQ 117
Query: 292 TVWRSKELHGRF 257
W++K LH F
Sbjct: 118 EDWKTKPLHVNF 129
>SB_36468| Best HMM Match : DUF1643 (HMM E-Value=4.1)
Length = 471
Score = 37.5 bits (83), Expect = 0.012
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = -3
Query: 286 WRSKELHGRFYRALTGPDVDQLASVAWLR-FSNLFGETEGFIFAIMDEVIMTNNY--RKY 116
W+ K L R+ ++D+ AW+R + + T I + ++ + T Y RK
Sbjct: 204 WQEKLLKSRW----EDEELDRPGCFAWMREWRDAPTHTIAGIVEMYEQQVPTKLYSARKT 259
Query: 115 ILKDGTVDICRACHRPGESIRHIVSGCSRFANGEYLHR 2
+CR C ES+ H+++GC A YL R
Sbjct: 260 YTSPADDIMCRLCGTTAESLAHVLAGCPALAQSTYLAR 297
>SB_911| Best HMM Match : bZIP_1 (HMM E-Value=0.53)
Length = 260
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 91 ICRACHRPGESIRHIVSGCSRFANGEYLHR 2
+CR C ES+ H+++GC A +YL R
Sbjct: 82 MCRLCGTTAESLAHVLAGCPALAKSKYLPR 111
>SB_40601| Best HMM Match : VWA_CoxE (HMM E-Value=6.3)
Length = 666
Score = 33.5 bits (73), Expect = 0.19
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 91 ICRACHRPGESIRHIVSGCSRFANGEYLHR 2
+CR C E++ H++ CS+ A +Y HR
Sbjct: 583 LCRICGLKDETVSHLLCECSKMAQSQYKHR 612
>SB_58627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 709 FFGRLIKVLKSHLSGGNKIRAFNGWVM 629
+F RL KVLK+ L+G N I A N W +
Sbjct: 197 YFRRLKKVLKAKLNGKNTIMAINTWAV 223
>SB_43755| Best HMM Match : rve (HMM E-Value=5.6e-11)
Length = 461
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 383 IPIHIHVHLKEIFPKVVYLSVM*ILGIQNT-TTPTFPR--NIQPHYRRT 520
+P+ +H F V+L V +LGI T TTP P N+ Y RT
Sbjct: 223 VPLELHSDQGRNFESQVFLEVCKLLGINKTRTTPAHPESDNMVDRYNRT 271
>SB_56748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + NW+ L+++ I+D +T+W
Sbjct: 18 GLWILMIISANWRILEIQRITDLLTIW 44
>SB_14555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 85 RACHRPGESIRHIVSGCSRFANGEYLHR 2
R C ES+ H+++GC A +YL R
Sbjct: 3 RLCGTTAESLAHVLAGCPALAQSKYLAR 30
>SB_57726| Best HMM Match : YiaAB (HMM E-Value=0.56)
Length = 400
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 85 RACHRPGESIRHIVSGCSRFANGEYLHR 2
R C ES+ H+++GC A +YL R
Sbjct: 209 RLCGTTAESLAHVLAGCPALAKSKYLAR 236
>SB_16711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 246 RAR*NLPCNSLLLHTVMRSEILSTFSLFQFP-LAKDSGVSPLSTATTSRYIFTFILRKYS 422
R+ N+ +SLLL+ + S ++ F++FQF L S SP S + S ++ I R S
Sbjct: 289 RSAVNMVLSSLLLYILCVSPLIIYFTVFQFEFLINYSPNSPSSPSALSYFLLLLIFRMNS 348
>SB_10374| Best HMM Match : Fibrinogen_BP (HMM E-Value=2.2)
Length = 707
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -3
Query: 118 YILKDGTV----DICRACHRPGESIRHIVSGCSRFANGEYLHR 2
YIL GT R C E++ H++ CS+ A +Y HR
Sbjct: 542 YILLVGTTLSLRRFLRMCGLKDETVNHLLCECSKMAQSQYKHR 584
>SB_37544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 856
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = -3
Query: 412 LKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISDRI---TVWRSKELHGRFYRALT 242
LK V +++ GL P +A + ++S+S RI WR K + R
Sbjct: 227 LKRAVLALDELIMTAAGLHPFQVA------ITIDSLSSRILRTNFWRKKTIRLIPTRGYR 280
Query: 241 GPDVDQLASVAWLRF 197
G DV L ++ WL++
Sbjct: 281 GHDVQSLKALQWLKY 295
>SB_52941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 772
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/100 (27%), Positives = 46/100 (46%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVWRSKELHGRFYRALTGPDVDQLASVAWLRFSNLF 185
G T L A G+ ++ ++S +D + + E R A++GP D LA+V+ L
Sbjct: 283 GCTNLCAACGDHSKMVLQSPAD----FETAETQARLRDAVSGPPTD-LATVS----DELT 333
Query: 184 GETEGFIFAIMDEVIMTNNYRKYILKDGTVDICRACHRPG 65
+ + + I ++N K + T D R+ HRPG
Sbjct: 334 KRVINGVTGALAKTIPSSNPSKIAAYEPTPDPRRSSHRPG 373
>SB_53998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L+++ I+D +T+W
Sbjct: 25 GLRILMIISADWRILEIQRITDLLTIW 51
>SB_53960| Best HMM Match : RNA_pol_Rpb2_3 (HMM E-Value=5.2)
Length = 98
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L++ I+D +T+W
Sbjct: 39 GLRILMIISADWRILEIRRITDLLTIW 65
>SB_52734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L++ I+D +T+W
Sbjct: 20 GLRILMIISADWRILEIRRITDLLTIW 46
>SB_52132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L++ I+D +T+W
Sbjct: 108 GLRILMIYSADWRILEIRQITDLLTIW 134
>SB_42778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L++ I+D +T+W
Sbjct: 16 GLRILMIISADWRILEIRRITDLLTIW 42
>SB_34773| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L++ I+D +T+W
Sbjct: 92 GLRILMIISADWRILEIRRITDLLTIW 118
>SB_11623| Best HMM Match : ABC1 (HMM E-Value=0)
Length = 780
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 405 ILRKYSLRLYISRLCRSLAFKIPRPPH 485
+LR LRLY L R + +IP PPH
Sbjct: 93 LLRNPGLRLYPVFLFRLMRVRIPAPPH 119
>SB_1675| Best HMM Match : ig (HMM E-Value=5.6e-05)
Length = 964
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 558 TFLSSTSSSDCVHLSMPKEYVNIGMTQPLNARILFPPDKWLFKTFIRRPKKPISKR 725
TF S+ S+P V +G ++PL A + PP F +R PI +R
Sbjct: 423 TFFDEKSNVKSTLCSLPWRNVTVGTSRPLEASVHLPP-----YMFGKRSTTPIDRR 473
>SB_53726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 837
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 97 VDICRACHRPGESIRHIVSGCSRFANGEYLHR 2
++ICR CH E + ++S C + +Y+H+
Sbjct: 667 LEICRICHCEAEPDQPLISPCHCSGSLQYVHQ 698
>SB_7224| Best HMM Match : TIL (HMM E-Value=8.2)
Length = 147
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -3
Query: 364 GLTPLSLANGNWKRLKVESISDRITVW 284
GL L + + +W+ L++ I+D +T+W
Sbjct: 33 GLRILMIISADWRILEIRRITDLLTIW 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,524,895
Number of Sequences: 59808
Number of extensions: 578020
Number of successful extensions: 1333
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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