Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3a22
         (768 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040301-1|AAH40301.1|  773|Homo sapiens PAS domain containing 1...    32   2.0  
AY623425-1|AAT49049.1|  305|Homo sapiens hypothetical protein LO...    32   2.0  
AK097552-1|BAC05097.1|  773|Homo sapiens protein ( Homo sapiens ...    32   2.0  
M13572-1|AAA60035.1|  193|Homo sapiens PCCA protein.                   31   3.4  
BC130567-1|AAI30568.1|  509|Homo sapiens solute carrier family 1...    30   7.9  
BC126238-1|AAI26239.1|  509|Homo sapiens solute carrier family 1...    30   7.9  
AK125791-1|BAC86293.1|  509|Homo sapiens  member 4 (SLC16A4).  p...    30   7.9  

>BC040301-1|AAH40301.1|  773|Homo sapiens PAS domain containing 1
           protein.
          Length = 773

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 PCNSLLLHTVMRSEILSTFSLFQFPLAKDSGVSPLST 374
           P N L L     SE +S+ S+ QFP+  DS +S L T
Sbjct: 649 PVNQLPLIDTSNSEAISSSSIPQFPITSDSTISTLET 685


>AY623425-1|AAT49049.1|  305|Homo sapiens hypothetical protein
           LOC139135 protein.
          Length = 305

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 PCNSLLLHTVMRSEILSTFSLFQFPLAKDSGVSPLST 374
           P N L L     SE +S+ S+ QFP+  DS +S L T
Sbjct: 181 PVNQLPLIDTSNSEAISSSSIPQFPITSDSTISTLET 217


>AK097552-1|BAC05097.1|  773|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40233 fis, clone TESTI2023085, weakly similar to
           CIRCADIAN LOCOMOTER OUTPUT CYCLES KAPUT PROTEIN. ).
          Length = 773

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 264 PCNSLLLHTVMRSEILSTFSLFQFPLAKDSGVSPLST 374
           P N L L     SE +S+ S+ QFP+  DS +S L T
Sbjct: 649 PVNQLPLIDTSNSEAISSSSIPQFPITSDSTISTLET 685


>M13572-1|AAA60035.1|  193|Homo sapiens PCCA protein.
          Length = 193

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -3

Query: 688 VLKSHLSGGNK-IRAFNGWVMPMLTYS 611
           VL+ HLSG NK I AFNGW +    Y+
Sbjct: 8   VLQEHLSGTNKLIFAFNGWAVECRVYA 34


>BC130567-1|AAI30568.1|  509|Homo sapiens solute carrier family 16,
           member 9 (monocarboxylic acid transporter 9) protein.
          Length = 509

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = -3

Query: 457 KDLHNR-EIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISDRITVWR 281
           +DL ++  IYN +   L+ N+N+     + ++    ++LANG+WK+  +   +  +T  +
Sbjct: 205 EDLPDKYSIYNEKGKNLEENINILDKSYSSEEKCR-ITLANGDWKQDSLLHKNPTVTHTK 263

Query: 280 SKELHGRFYRALTGPDVDQLASVAWLRFSNLFGET 176
             E + +     T     QLA   W  + N  GET
Sbjct: 264 EPETYKKKVAEQT-YFCKQLAKRKWQLYKNYCGET 297


>BC126238-1|AAI26239.1|  509|Homo sapiens solute carrier family 16,
           member 9 (monocarboxylic acid transporter 9) protein.
          Length = 509

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = -3

Query: 457 KDLHNR-EIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISDRITVWR 281
           +DL ++  IYN +   L+ N+N+     + ++    ++LANG+WK+  +   +  +T  +
Sbjct: 205 EDLPDKYSIYNEKGKNLEENINILDKSYSSEEKCR-ITLANGDWKQDSLLHKNPTVTHTK 263

Query: 280 SKELHGRFYRALTGPDVDQLASVAWLRFSNLFGET 176
             E + +     T     QLA   W  + N  GET
Sbjct: 264 EPETYKKKVAEQT-YFCKQLAKRKWQLYKNYCGET 297


>AK125791-1|BAC86293.1|  509|Homo sapiens  member 4 (SLC16A4).
           protein.
          Length = 509

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
 Frame = -3

Query: 457 KDLHNR-EIYNLREYFLKMNVNMYRDVVAVDKGLTPLSLANGNWKRLKVESISDRITVWR 281
           +DL ++  IYN +   L+ N+N+     + ++    ++LANG+WK+  +   +  +T  +
Sbjct: 205 EDLPDKYSIYNEKGKNLEENINILDKSYSSEEKCR-ITLANGDWKQDSLLHKNPTVTHTK 263

Query: 280 SKELHGRFYRALTGPDVDQLASVAWLRFSNLFGET 176
             E + +     T     QLA   W  + N  GET
Sbjct: 264 EPETYKKKVAEQT-YFCKQLAKRKWQLYKNYCGET 297


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,870,127
Number of Sequences: 237096
Number of extensions: 2724227
Number of successful extensions: 4750
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4750
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)