Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a22
(768 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 25 0.59
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 25 0.59
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 25 1.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.2
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 22 7.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 7.2
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 25.4 bits (53), Expect = 0.59
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 454 DLHNREIYNL-REYFLKMNVNMYRDVVAVDKGL 359
DL + E Y++ R Y ++ N++MY+D V K L
Sbjct: 50 DLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFL 82
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 25.4 bits (53), Expect = 0.59
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -3
Query: 454 DLHNREIYNL-REYFLKMNVNMYRDVVAVDKGL 359
DL + E Y++ R Y ++ N++MY+D V K L
Sbjct: 50 DLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFL 82
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 384 SRYIFTFILRKYSLRLYISRLCRSLAFKIPRPPHFRGIYNL 506
S +I T + Y++ LYIS + L + R ++ G+Y+L
Sbjct: 236 SGFITTEVAGTYAIFLYISWHQKELVRRDSRRKNYGGVYHL 276
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 540 AVNNRLTFLSSTSSSDCVHLSMPKEYVNIGMTQPLNARILFPPDKWLFKTFI 695
AV++ + +S++SSD +S K G + + R L PP TF+
Sbjct: 1813 AVSDFIYHGTSSTSSDISPMSEQKSLPRRGRSSRSSLRTLLPPISVAETTFV 1864
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 540 AVNNRLTFLSSTSSSDCVHLSMPKEYVNIGMTQPLNARILFPPDKWLFKTFI 695
AV++ + +S++SSD +S K G + + R L PP TF+
Sbjct: 1809 AVSDFIYHGTSSTSSDISPMSEQKSLPRRGRSSRSSLRTLLPPISVAETTFV 1860
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 606 PKEYVNIGMTQPLNARILFPPDKWLFKTF 692
P + + T + ARI FP ++F TF
Sbjct: 452 PPHPIRVAKTIDVIARITFPVAYFMFLTF 480
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 606 PKEYVNIGMTQPLNARILFPPDKWLFKTF 692
P + + T + ARI FP ++F TF
Sbjct: 438 PPHPIRVAKTIDVIARITFPVAYFMFLTF 466
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 606 PKEYVNIGMTQPLNARILFPPDKWLFKTF 692
P + + T + ARI FP ++F TF
Sbjct: 472 PPHPIRVAKTIDVIARITFPVAYFMFLTF 500
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 606 PKEYVNIGMTQPLNARILFPPDKWLFKTF 692
P + + T + ARI FP ++F TF
Sbjct: 421 PPHPIRVAKTIDVIARITFPVAYFMFLTF 449
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced protein
75 protein.
Length = 30
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -3
Query: 106 DGTVDICRACHRPGESIRHIVSGC 35
DGT +CR C + V C
Sbjct: 3 DGTTVLCRVCGDKASGFHYGVHSC 26
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/24 (33%), Positives = 10/24 (41%)
Frame = -3
Query: 106 DGTVDICRACHRPGESIRHIVSGC 35
DGT +CR C + V C
Sbjct: 61 DGTTVLCRVCGDKASGFHYGVHSC 84
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,663
Number of Sequences: 438
Number of extensions: 5672
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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