Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a19
(437 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37 pro... 132 4e-31
D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37 pro... 132 4e-31
CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein. 132 4e-31
BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein. 132 4e-31
BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37 p... 132 4e-31
AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37 p... 132 4e-31
S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37 pro... 130 2e-30
BC019292-1|AAH19292.1| 279|Homo sapiens 1-acylglycerol-3-phosph... 31 2.3
AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37 p... 30 4.0
AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA seq... 29 5.3
AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA seq... 29 5.3
>L11567-1|AAA62148.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (320), Expect = 4e-31
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>D23661-1|BAA04888.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (320), Expect = 4e-31
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>CR456890-1|CAG33171.1| 97|Homo sapiens RPL37 protein.
Length = 97
Score = 132 bits (320), Expect = 4e-31
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC084576-1|AAH84576.1| 97|Homo sapiens RPL37 protein protein.
Length = 97
Score = 132 bits (320), Expect = 4e-31
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC079477-1|AAH79477.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (320), Expect = 4e-31
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>AB061834-1|BAB79472.1| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 132 bits (320), Expect = 4e-31
Identities = 60/93 (64%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
MRHLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMRHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>S79979-1|AAB47039.2| 97|Homo sapiens ribosomal protein L37
protein.
Length = 97
Score = 130 bits (314), Expect = 2e-30
Identities = 59/93 (63%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = +1
Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
TKGTSSFGKRRNKTHTLCRRCG +YH+QKS C +CGYPA + R Y+WS KA
Sbjct: 2 TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGT 61
Query: 292 XXMRHLKIVRRRFRNGFKEG-KPTPPKKAVASS 387
M HLKIV RRFR+GF+EG P P + AVA+S
Sbjct: 62 GRMSHLKIVYRRFRHGFREGTTPKPKRAAVAAS 94
>BC019292-1|AAH19292.1| 279|Homo sapiens 1-acylglycerol-3-phosphate
O-acyltransferase 2 (lysophosphatidic acid acyltrans
protein.
Length = 279
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/70 (21%), Positives = 32/70 (45%)
Frame = -2
Query: 265 PSLTSGRIVILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPSYLICKIIIL 86
P L + +++LL + + R F + +Y C T + LR+ + + I+
Sbjct: 5 PCLAAALLLLLLLLVQLSRAAEFYAKVALYCALCFTVSAVASLVCLLRHGGRTVENMSII 64
Query: 85 SVWIHSFKFY 56
++ SFK++
Sbjct: 65 GWFVRSFKYF 74
>AB007183-1|BAA25842.1| 27|Homo sapiens ribosomal protein L37
protein.
Length = 27
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 250 HWSVKAXXXXXXXXXXMRHLKIVRRRF 330
+WS KA MRHLKIV RRF
Sbjct: 1 NWSAKAKRRNTTGTGRMRHLKIVYRRF 27
>AL355305-3|CAI14559.1| 436|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 436
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 201 IKMRPMWISCSKITILPLVSEG*AQEDYW 287
IK RP W CSK LP V+E ++ W
Sbjct: 253 IKRRPPWQICSKFGALPFVAEKPSRTTSW 281
>AL355305-2|CAI14560.1| 360|Homo sapiens protein ( Human DNA
sequence from clone RP11-487F23 on chromosome 6. ).
Length = 360
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 201 IKMRPMWISCSKITILPLVSEG*AQEDYW 287
IK RP W CSK LP V+E ++ W
Sbjct: 177 IKRRPPWQICSKFGALPFVAEKPSRTTSW 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,465,436
Number of Sequences: 237096
Number of extensions: 1084753
Number of successful extensions: 1938
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -