Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3a19
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   111   2e-25
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   105   2e-23
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.37 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   0.48 
Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AF043699-4|AAB97568.1|  610|Caenorhabditis elegans Serotonin/oct...    28   2.6  
AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine re...    28   3.4  
AF067945-13|AAC17676.2|  308|Caenorhabditis elegans Serpentine r...    27   4.5  
Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  111 bits (267), Expect = 2e-25
 Identities = 46/86 (53%), Positives = 59/86 (68%)
 Frame = +1

Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
           TKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W  K+        
Sbjct: 2   TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTGT 61

Query: 292 XXMRHLKIVRRRFRNGFKEGKPTPPK 369
              RHL+ V  RFRNGF+EG    P+
Sbjct: 62  GRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  105 bits (251), Expect = 2e-23
 Identities = 44/84 (52%), Positives = 56/84 (66%)
 Frame = +1

Query: 112 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXX 291
           TKGT +FGK+  K+HTLC+RCG+SS+HIQK +CA CGY  AK R+Y+W  K+        
Sbjct: 2   TKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGT 61

Query: 292 XXMRHLKIVRRRFRNGFKEGKPTP 363
              RHL+ V  RFRNGF+   P P
Sbjct: 62  GRTRHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 127 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 234
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 127 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 234
           ++ K    TH  C +CG+ + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


>Z92777-6|CAE17682.1|  353|Caenorhabditis elegans Hypothetical
           protein C17H1.9 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 140 AEIRPIRYAEDVVDRH---ITFKNQNAPNVDILQQNYDP 247
           A+++ I+Y  D +++H   + F+NQ   +   L+ N DP
Sbjct: 230 ADLKKIKYTSDEIEKHKSKLEFRNQQLESSRTLEINADP 268


>AF043699-4|AAB97568.1|  610|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 3 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 202 IFECDMTIYHIFCITYGSYFGAYRSLRYPSYLI---CKIIILSVWIHSF 65
           I+ C  +IY++  I+   Y    + L YP  +     +  +  VWI SF
Sbjct: 140 IWMCTASIYNLVAISIDRYIAIIKPLNYPMLVTKFRARCTVAIVWIGSF 188


>AF039049-1|AAB94253.1|  299|Caenorhabditis elegans Serpentine
           receptor, class x protein68 protein.
          Length = 299

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = -2

Query: 220 HIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPSYLICK---IIILSVWI 74
           H G +++F  +++++  F I+   +F  +  L+Y S    K    +I+ +WI
Sbjct: 77  HCGFVILFCYELSVFTHFAISINRFFAVWMPLKYESMFNIKRTRWMIVFMWI 128


>AF067945-13|AAC17676.2|  308|Caenorhabditis elegans Serpentine
           receptor, class x protein59 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
 Frame = -2

Query: 265 PSLTSGRIVILLQDIHIGRILIFECDMTIYHIFCITYGSYFGAYRSLRYPSYLI---CKI 95
           P + +G   +     H G IL+F  ++++     I+   +F  +   RY +       KI
Sbjct: 65  PMVITGSEFLTEYSEHCGFILLFSYELSVQIHLVISLNRFFAVWTPYRYKTMFSERNTKI 124

Query: 94  IILSVWI----HSFKFY 56
           II  ++I     SF FY
Sbjct: 125 IIFLIFILTLGFSFSFY 141


>Z50742-2|CAA90616.1|  491|Caenorhabditis elegans Hypothetical
           protein K09A11.2 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 435 FFLVFLIFI--YLAHIDS*RSYSLLGRRWFPFFKTITEAPPDNLQ 307
           F L F+IFI  Y+ H     S    G    PF   I + PPDN+Q
Sbjct: 4   FILAFVIFIIFYVFHFYWKVSKYPKGPLPLPFIGNIHQFPPDNVQ 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,214,370
Number of Sequences: 27780
Number of extensions: 179629
Number of successful extensions: 370
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)