Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a16
(387 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like p... 65 5e-10
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p... 58 4e-08
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 51 7e-06
UniRef50_A6R0B1 Cluster: Predicted protein; n=9; Ajellomyces cap... 48 8e-05
UniRef50_UPI00015B490C Cluster: PREDICTED: similar to polyprotei... 46 2e-04
UniRef50_A6RHH2 Cluster: Predicted protein; n=1; Ajellomyces cap... 45 6e-04
UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like p... 44 8e-04
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 42 0.004
UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;... 42 0.005
UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA... 40 0.017
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 39 0.029
UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like p... 39 0.038
UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1; ... 38 0.051
UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:... 38 0.089
UniRef50_A5D9X8 Cluster: Putative uncharacterized protein; n=2; ... 38 0.089
UniRef50_Q8G3X8 Cluster: Ribonuclease H; n=2; Bifidobacterium lo... 37 0.12
UniRef50_A7EVI9 Cluster: Putative uncharacterized protein; n=2; ... 37 0.12
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 37 0.16
UniRef50_A7EV45 Cluster: Putative uncharacterized protein; n=2; ... 37 0.16
UniRef50_A7ERU2 Cluster: Putative uncharacterized protein; n=12;... 37 0.16
UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 37 0.16
UniRef50_UPI00015B518C Cluster: PREDICTED: similar to cuticle pr... 36 0.27
UniRef50_A7EXQ0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.36
UniRef50_A7EMT8 Cluster: Putative uncharacterized protein; n=2; ... 36 0.36
UniRef50_A6RGE6 Cluster: Predicted protein; n=5; Ajellomyces cap... 35 0.47
UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces cap... 35 0.47
UniRef50_Q9IDV9 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 35 0.47
UniRef50_Q596Q3 Cluster: Pol protein; n=76; Human immunodeficien... 35 0.63
UniRef50_Q0TVA8 Cluster: Putative uncharacterized protein; n=1; ... 35 0.63
UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rho... 34 0.83
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 34 0.83
UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1; ... 33 1.9
UniRef50_UPI000021BF54 Cluster: hypothetical protein MG09042.4; ... 33 2.5
UniRef50_Q2JHH6 Cluster: Ribonuclease H; n=2; Synechococcus|Rep:... 33 2.5
UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_Q2PIN6 Cluster: Predicted protein; n=1; Aspergillus ory... 33 2.5
UniRef50_UPI00015B4F8A Cluster: PREDICTED: similar to lachesin, ... 32 3.3
UniRef50_UPI00015B4A79 Cluster: PREDICTED: similar to Lian-Aa1 r... 32 3.3
UniRef50_UPI00006D02BF Cluster: hypothetical protein TTHERM_0094... 32 3.3
UniRef50_Q04CJ1 Cluster: RNase H with double-stranded RNA/RNA-DN... 32 3.3
UniRef50_A7U4W3 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 32 3.3
UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1; ... 32 3.3
UniRef50_A6SD14 Cluster: Putative uncharacterized protein; n=2; ... 32 3.3
UniRef50_Q3KNE1 Cluster: Transmembrane phosphatase with tensin h... 32 4.4
UniRef50_Q9L9M4 Cluster: ORF32; n=29; Borrelia burgdorferi group... 32 4.4
UniRef50_Q9H717 Cluster: CDNA: FLJ21551 fis, clone COL06266; n=1... 32 4.4
UniRef50_A7F6Z7 Cluster: Putative uncharacterized protein; n=1; ... 32 4.4
UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia... 32 4.4
UniRef50_Q7Z7G0 Cluster: Target of Nesh-SH3 precursor; n=6; Ther... 32 4.4
UniRef50_A7KH12 Cluster: NapU4; n=2; Streptomyces|Rep: NapU4 - S... 31 5.8
UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella ... 31 5.8
UniRef50_Q5KPB0 Cluster: Ribonuclease H, putative; n=2; Filobasi... 31 5.8
UniRef50_P18096 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol) [Con... 31 5.8
UniRef50_P32542 Cluster: Pol polyprotein [Contains: Protease (Re... 31 5.8
UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1 r... 31 7.7
UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; ... 31 7.7
UniRef50_A1Z6Z8 Cluster: CG2146-PC, isoform C; n=13; Coelomata|R... 31 7.7
>UniRef50_UPI00015B4772 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 751
Score = 64.9 bits (151), Expect = 5e-10
Identities = 34/101 (33%), Positives = 55/101 (54%)
Frame = -2
Query: 308 FKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSK 129
F W+P+H GI+GNE D + +++ +N RVP++D L K+ + +S K ++
Sbjct: 568 FYWIPAHVGIEGNERADTVAKRATEKNFSNYSRVPYSDILASAKKTAFVNTDSINKEQAQ 627
Query: 128 HKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
KG Y E+ + KPW+ +K + R +I INR R H
Sbjct: 628 KKGREYFEMYRTENVKPWF--HKSSLPRDYIVTINRCRADH 666
>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to pol-like protein - Nasonia vitripennis
Length = 1119
Score = 58.4 bits (135), Expect = 4e-08
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Frame = -2
Query: 359 LLYKIREALTSL---DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFL 189
L+ ++R+ L S + + W+P+H GIKGNE VD + + + + + ++DF
Sbjct: 915 LIAELRQKLASRAEENVKIKLVWIPAHAGIKGNETVDKMAKNAAIDGKLLNDPIRYSDFF 974
Query: 188 FDLKQRSRKLWESYWKLCSKHKGSWYAEIQKELP-SKPWYDKYKGANERKFITIINRLRF 12
++K+ +K + K KG +Y E ++ +KPW++ + RK I NR+R
Sbjct: 975 ANIKETCKKENQDIITNLGKKKGIFYFENFGDIEGNKPWFNNTR--LSRKAIVSFNRIRC 1032
Query: 11 GH 6
GH
Sbjct: 1033 GH 1034
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 51.2 bits (117), Expect = 7e-06
Identities = 30/115 (26%), Positives = 57/115 (49%)
Frame = -2
Query: 350 KIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQR 171
K+ + +T+ VTF WVPSH GI+GNE D + + ++P++D +
Sbjct: 1042 KLLDLITADRRDVTFIWVPSHVGIEGNEAADREAKRALNH-AVSGTQIPYSDLRQSIASA 1100
Query: 170 SRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
+ + W++ W + ++++++ + W KG R+ T ++RLR GH
Sbjct: 1101 TYREWQNRW------EAETHSKLRQIVADVRWRPTSKGLT-RRGSTTMSRLRIGH 1148
>UniRef50_A6R0B1 Cluster: Predicted protein; n=9; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1672
Score = 47.6 bits (108), Expect = 8e-05
Identities = 31/118 (26%), Positives = 53/118 (44%)
Frame = -2
Query: 359 LLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDL 180
+L+ +E L S+ + +WVP H GIKGNE+ D + + + + T+ P +
Sbjct: 1462 ILHTTKE-LRSIGVDLCLQWVPGHSGIKGNEMADQLAKQSINPNPTHGFPKPASHLREAS 1520
Query: 179 KQRSRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
+ + + W W S KG+ +I LP + Y R ++ +LR GH
Sbjct: 1521 RNSTTQEWRDEWS--STAKGTHLRKIDAALPGRHARRLY-ATLPRPRARLLAQLRTGH 1575
>UniRef50_UPI00015B490C Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1121
Score = 46.4 bits (105), Expect = 2e-04
Identities = 30/90 (33%), Positives = 42/90 (46%)
Frame = -2
Query: 275 GNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHKGSWYAEIQK 96
GNEIVD +E N +VP+TD K ++ K E K K KG Y ++
Sbjct: 811 GNEIVDHYAKKATNETPLNDLKVPYTDLKTVFKTKAYKNTEETIKEIGKIKGVNYFDVFY 870
Query: 95 ELPSKPWYDKYKGANERKFITIINRLRFGH 6
+ ++PW + R IT INR+ GH
Sbjct: 871 KTGARPWL--CLKSLPRDMITTINRICLGH 898
>UniRef50_A6RHH2 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 832
Score = 44.8 bits (101), Expect = 6e-04
Identities = 28/117 (23%), Positives = 50/117 (42%)
Frame = -2
Query: 356 LYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLK 177
+ + + L S+ + +WVP H GI+GNE+ D + + + + T+ P + +
Sbjct: 622 ILRTTKQLKSIGIDLCLQWVPGHSGIRGNEMADQLAKQSINPNPTHGFPKPASHLREASR 681
Query: 176 QRSRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
+ W W S KG+ +I LP + Y R ++ +LR GH
Sbjct: 682 NSTTHEWRDEWS--STAKGTHLRKIDAALPGQHTRRLY-ATLPRPQARLLAQLRTGH 735
>UniRef50_UPI00015B5A7A Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 727
Score = 44.4 bits (100), Expect = 8e-04
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = -2
Query: 323 DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYW 144
+ + + W+P+H GI GNE+ D + + + + +P+ DF K + +
Sbjct: 473 ENDIKYYWIPAHVGILGNEMADQLAKEAAELNDESPVTIPYADFYGLHKMECKFKTNLHV 532
Query: 143 KLCSKHKG-SWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
K +KG S++ + E SKPW+ + R+ I IN R H
Sbjct: 533 KTEGLNKGKSFFLKFHHE-RSKPWF--HNKNLSRQVIVTINICRSNH 576
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 41.9 bits (94), Expect = 0.004
Identities = 34/122 (27%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Frame = -2
Query: 368 NNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFL 189
N++ +IR +T + W+P H GIKGNE+ D S + + TD
Sbjct: 1025 NSFYPSRIRSLITQHAPKIKIMWIPGHSGIKGNELADQAAKSASSMPLILTPNINTTDIK 1084
Query: 188 FDLKQRSRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITI-INRLRF 12
LK + + CS WY I Y K N + I I RLR
Sbjct: 1085 KHLKADLATKQKEHIINCS----PWYQSINTNTSHPCDYLKQSHPNWTRLDQIKIIRLRL 1140
Query: 11 GH 6
GH
Sbjct: 1141 GH 1142
>UniRef50_A2QSP9 Cluster: Contig An08c0290, complete genome; n=7;
Trichocomaceae|Rep: Contig An08c0290, complete genome -
Aspergillus niger
Length = 1644
Score = 41.5 bits (93), Expect = 0.005
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 3/122 (2%)
Frame = -2
Query: 359 LLYKIREALTSLDT---PVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFL 189
++Y I +A + T + +WVP H I GN+ D + T+ +
Sbjct: 1429 IIYAILQAAKNTRTHGVTIRLQWVPGHSEILGNDAADRLAKEAAIPGKTHPFSPLLSRER 1488
Query: 188 FDLKQRSRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFG 9
++Q WE WK G +I LP+K + + GA R ++ ++R G
Sbjct: 1489 AYIRQGILTQWEKEWK--ESRDGGHLRKIDNTLPAK-YTRRLYGALPRNRAYLLTQIRSG 1545
Query: 8 HC 3
HC
Sbjct: 1546 HC 1547
>UniRef50_UPI00015B4909 Cluster: PREDICTED: similar to GA16357-PA,
partial; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to GA16357-PA, partial - Nasonia vitripennis
Length = 826
Score = 39.9 bits (89), Expect = 0.017
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -2
Query: 323 DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYW 144
+ + + W+P+H GI NE+ + + + + +P+ +F K + +
Sbjct: 610 ENDIKYYWIPAHVGILENEMAYQLAKEAAELNDESPVTIPYANFYGLHKMECKFKTNLHV 669
Query: 143 KLCSKHKG-SWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
K +KG S++ E SKPW+ K R+ I INR R H
Sbjct: 670 KTEGLNKGKSFFRNFHHE-RSKPWFHNKK--LSRQVIVTINRCRSNH 713
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 39.1 bits (87), Expect = 0.029
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 368 NNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVD 258
N+ ++R L+S +T WVPSH+GI GNE+ D
Sbjct: 1040 NDPTTQEVRHILSSHPKKITLLWVPSHQGIHGNELAD 1076
>UniRef50_UPI00015B47A9 Cluster: PREDICTED: similar to pol-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to pol-like protein - Nasonia vitripennis
Length = 819
Score = 38.7 bits (86), Expect = 0.038
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = -2
Query: 371 RNNYLLYKIREALTSL---DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPF 201
+++ L+ IR+ L+ L + V W+P+H G+ GNEIVD + + +P+
Sbjct: 638 KSSPLIADIRQKLSYLADQNIKVKLVWIPAHIGLTGNEIVDDMAKKAAINGEFVNEPIPY 697
Query: 200 TDFLFDLKQRSRKLWESYWKLCSKHKG 120
TD ++ + +K E+ K KG
Sbjct: 698 TDLFEIIRGKQKKENENIVCNLGKEKG 724
>UniRef50_Q1E605 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 474
Score = 38.3 bits (85), Expect = 0.051
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2
Query: 365 NYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVD 258
N ++ L L+ ++ WVP+H+GIKGNE+ D
Sbjct: 244 NVYAAELARVLMGLEIAISLHWVPAHQGIKGNELAD 279
>UniRef50_A6R8Y2 Cluster: Predicted protein; n=5; Onygenales|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 1913
Score = 37.5 bits (83), Expect = 0.089
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
Frame = -2
Query: 377 HYRNNYLLYK---IREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNS------NYDEDH 225
H Y+L + + + L L V F W+P+H G+ GNE D + N ++
Sbjct: 1694 HSSGQYILVEAIQVLDRLRDLGWEVQFHWIPAHVGVPGNEEADRLAKRAADPTLNTEQPE 1753
Query: 224 TNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANER 45
+ R ++Q + WE+ W+ KH + + P K + + G + R
Sbjct: 1754 PDLIRTLLASTKSTIRQAMKGEWETSWEK-GKHGRDLFRLGAR--PGKATLNTHMGTH-R 1809
Query: 44 KFITIINRLRFG 9
++I ++R G
Sbjct: 1810 AISSVITQMRTG 1821
>UniRef50_A5D9X8 Cluster: Putative uncharacterized protein; n=2;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 243
Score = 37.5 bits (83), Expect = 0.089
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 362 YLLYKIREALTSLDTP-VTFKWVPSHRGIKGNEIVDGIVNSNYDED 228
+ L +I E L ++ P V ++VP H G GNE+ D + N DED
Sbjct: 192 FYLKEINERLANIGLPPVKIEYVPGHAGNHGNEMADKLANKAADED 237
>UniRef50_Q8G3X8 Cluster: Ribonuclease H; n=2; Bifidobacterium
longum|Rep: Ribonuclease H - Bifidobacterium longum
Length = 328
Score = 37.1 bits (82), Expect = 0.12
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 371 RNNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNS 243
+N L+ I ++ PV F+WV H G +GNE+VD + +
Sbjct: 140 KNKELIQAIDREISQRPGPVDFRWVKGHAGNEGNELVDELART 182
>UniRef50_A7EVI9 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 806
Score = 37.1 bits (82), Expect = 0.12
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -2
Query: 350 KIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQR 171
K EA+ + ++ WVP H ++GNE+ D + + ++S +T D+K+
Sbjct: 704 KAAEAIQNKGAEISLNWVPGHTSVQGNELADSLA-KEATKILSSSHETSYTSIGMDIKRM 762
Query: 170 SRKLW 156
+ W
Sbjct: 763 KSENW 767
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 36.7 bits (81), Expect = 0.16
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKL----WESY 147
V F+W+P+HRG++GNE D R T +K+R+ ++ WE+
Sbjct: 286 VHFRWIPAHRGVEGNEQADRRAKEATGWRRIRGHRGRMT-IRSAVKRRAHEVVNARWEND 344
Query: 146 WKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFG 9
WK C H G E+ P++ ++ + R TII ++R G
Sbjct: 345 WKSC--HHGRELYEL-TPTPTRKVLRVHQDLH-RALSTIIVQMRTG 386
>UniRef50_A7EV45 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 778
Score = 36.7 bits (81), Expect = 0.16
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 350 KIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQR 171
K EA+ + ++ WVP H ++GNE+ D + + ++S + D+K+
Sbjct: 319 KAAEAIQNKGAEISLNWVPGHTSVQGNELADSLA-KEATKIPSSSHETSYASIGMDIKRM 377
Query: 170 SRKLWESYWKLCSKHKGSWYAEIQKELPSK-PWYDKYKGANERKFITIINRLRFGH 6
+ W + + H+ S + + P K + G +R I + +L+ GH
Sbjct: 378 KSENWITILNTNNFHQPS--STYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGH 431
>UniRef50_A7ERU2 Cluster: Putative uncharacterized protein; n=12;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1660
Score = 36.7 bits (81), Expect = 0.16
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 350 KIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQR 171
K EA+ + ++ WVP H ++GNE+ D + + ++S + D+K+
Sbjct: 1443 KAAEAIQNKGAEISLNWVPGHTSVQGNELADSLA-KEATKIPSSSHETSYASIGMDIKRM 1501
Query: 170 SRKLWESYWKLCSKHKGSWYAEIQKELPSK-PWYDKYKGANERKFITIINRLRFGH 6
+ W + + H+ S + + P K + G +R I + +L+ GH
Sbjct: 1502 KSENWIAILNTNNFHQPS--STYSRNYPWKISSKIRIPGNIKRSTICALFQLKIGH 1555
>UniRef50_Q8AII1 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Nucleocapsid protein p7 (NC); p6-pol (p6*);
Protease (EC 3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=133; Primate lentivirus group|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA); Capsid
protein p24 (CA); Nucleocapsid protein p7 (NC); p6-pol
(p6*); Protease (EC 3.4.23.16) (Retropepsin) (PR);
Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC
2.7.7.7) (EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase
(IN)] - Simian immunodeficiency virus (isolate TAN1)
(SIV-cpz) (Chimpanzeeimmunodeficiency virus)
Length = 1462
Score = 36.7 bits (81), Expect = 0.16
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 359 LLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSN 240
++ +I + LT T + WVP+H+GI GNE VD +V+ N
Sbjct: 1131 IVEQIIQKLTQ-KTAIYLAWVPAHKGIGGNEEVDKLVSKN 1169
>UniRef50_UPI00015B518C Cluster: PREDICTED: similar to cuticle
protein LCP65Ac; n=3; Nasonia vitripennis|Rep:
PREDICTED: similar to cuticle protein LCP65Ac - Nasonia
vitripennis
Length = 256
Score = 35.9 bits (79), Expect = 0.27
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -2
Query: 323 DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYW 144
+ + + W+P H GI GNE+ D + + + + +P+ DF K + +
Sbjct: 58 ENDIKYYWIPVHVGILGNEMADQLAKEAAELNDESHVTIPYADFYGLHKMECKFKTNLHV 117
Query: 143 KLCSKHKG-SWYAEIQKELPSKP 78
K+ +KG S++ + E SKP
Sbjct: 118 KIEGLNKGKSFFLKFHHE-RSKP 139
>UniRef50_A7EXQ0 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 650
Score = 35.5 bits (78), Expect = 0.36
Identities = 15/65 (23%), Positives = 30/65 (46%)
Frame = -2
Query: 350 KIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQR 171
K EA+ + ++ WVP H ++GNE+ D + + ++S + D+K+
Sbjct: 580 KAAEAIQNKGAEISLNWVPGHTSVQGNELADSLA-KEATKIPSSSHETSYASIGMDIKRM 638
Query: 170 SRKLW 156
+ W
Sbjct: 639 KSENW 643
>UniRef50_A7EMT8 Cluster: Putative uncharacterized protein; n=2;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1249
Score = 35.5 bits (78), Expect = 0.36
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = -2
Query: 350 KIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQR 171
K EA+ + ++ WVP H ++GNE+ D + + + S + D+K+
Sbjct: 206 KAAEAIQNKGAEISLNWVPGHTSVQGNELADSLA-KEATKIPSPSHETSYASIGMDIKRM 264
Query: 170 SRKLWESYWKLCSKHKGSWYAEIQKELPSK-PWYDKYKGANERKFITIINRLRFGH 6
+ W + + H+ S + + P K + G +R I + +L+ GH
Sbjct: 265 KSENWIAILNTNNFHQPS--STYSRNYPWKISSKIRVPGNIKRSTICALFQLKIGH 318
>UniRef50_A6RGE6 Cluster: Predicted protein; n=5; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1139
Score = 35.1 bits (77), Expect = 0.47
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 341 EALTSLDTPVTFKWVPSHRGIKGNEIVD 258
E + S V F W+P+H+GI+GNE+ D
Sbjct: 919 ERVRSQGLQVEFYWIPAHQGIEGNELAD 946
>UniRef50_A6RCU0 Cluster: Predicted protein; n=8; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1838
Score = 35.1 bits (77), Expect = 0.47
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 341 EALTSLDTPVTFKWVPSHRGIKGNEIVD 258
E + S V F W+P+H+GI+GNE+ D
Sbjct: 1621 ERVRSQGLQVEFYWIPAHQGIEGNELAD 1648
>UniRef50_Q9IDV9 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Spacer peptide p2; Nucleocapsid protein p7 (NC);
Transframe peptide (TF); p6-pol (p6*); Protease (EC
3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=97846; Retroviridae|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA); Capsid
protein p24 (CA); Spacer peptide p2; Nucleocapsid protein
p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease
(EC 3.4.23.16) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)] -
Human immunodeficiency virus type 1 (isolate YBF106 group
N) (HIV-1)
Length = 1449
Score = 35.1 bits (77), Expect = 0.47
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVDGIVNS 243
V WVP+H+GI GNE VD +V+S
Sbjct: 1128 VYLSWVPAHKGIGGNEQVDXLVSS 1151
>UniRef50_Q596Q3 Cluster: Pol protein; n=76; Human immunodeficiency
virus 1|Rep: Pol protein - Human immunodeficiency virus
1
Length = 913
Score = 34.7 bits (76), Expect = 0.63
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVDGIVNS 243
V WVP+H+GI GNE VD +V+S
Sbjct: 596 VYLSWVPAHKGIGGNEQVDKLVSS 619
>UniRef50_Q0TVA8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1366
Score = 34.7 bits (76), Expect = 0.63
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 362 YLLYKIREALTSLDT---PVTFKWVPSHRGIKGNEIVD 258
Y+L +I + L PVT +W+P+H GI GNE D
Sbjct: 1152 YILEEIARQVQRLQDKGRPVTVRWIPAHVGIPGNEAAD 1189
>UniRef50_UPI00015B542A Cluster: PREDICTED: similar to myosin-rhogap
protein, myr; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to myosin-rhogap protein, myr - Nasonia
vitripennis
Length = 2292
Score = 34.3 bits (75), Expect = 0.83
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 377 HYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVD 258
H + L+++ +E + + V WVP H GI+GNEI D
Sbjct: 2096 HRTTSRLVWEYKEVVNN--NKVRLLWVPGHTGIRGNEIAD 2133
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 34.3 bits (75), Expect = 0.83
Identities = 29/101 (28%), Positives = 42/101 (41%)
Frame = -2
Query: 308 FKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSK 129
F WVP H GI+GN D + S + P D K + R W W
Sbjct: 1042 FLWVPGHCGIRGNVEADHLA-SKGRSGRLFTRLTPGMDLKNWTKSQIRSSWALEW---VN 1097
Query: 128 HKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLRFGH 6
+ + +I+ E +K W D N R+ +++RLR GH
Sbjct: 1098 LRDKFIRKIKGE--TKRWID----TNNRRDQQVLSRLRTGH 1132
>UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 776
Score = 33.1 bits (72), Expect = 1.9
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -2
Query: 365 NYLLYKIREALTSLDTP---VTFKWVPSHRGIKGNEIVDGIVNSNYDE 231
++ + KI E L SL ++ WVPSH GI GNE D + + E
Sbjct: 711 DFFIVKIIELLGSLFDKAFRISLIWVPSHCGIPGNEKADSLAKTGVKE 758
>UniRef50_UPI000021BF54 Cluster: hypothetical protein MG09042.4;
n=1; Magnaporthe grisea 70-15|Rep: hypothetical protein
MG09042.4 - Magnaporthe grisea 70-15
Length = 1006
Score = 32.7 bits (71), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 353 YKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNY 237
+ + + L T V +W P H+GI GN+ D + + Y
Sbjct: 788 HNLVDLLRKQSTEVRVRWCPGHQGIPGNDRADELAKAGY 826
>UniRef50_Q2JHH6 Cluster: Ribonuclease H; n=2; Synechococcus|Rep:
Ribonuclease H - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 169
Score = 32.7 bits (71), Expect = 2.5
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = -2
Query: 302 WVPSHRGIKGNEIVDGIV 249
W+P+H+G++ NE VDG+V
Sbjct: 137 WIPAHQGLRWNEYVDGLV 154
>UniRef50_Q5BGG2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized protein
- Emericella nidulans (Aspergillus nidulans)
Length = 1411
Score = 32.7 bits (71), Expect = 2.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 335 LTSLDTPVTFKWVPSHRGIKGNEIVD 258
LT P+ +W+P H GI GNE+ D
Sbjct: 1217 LTMQWKPLQVRWIPGHSGIAGNELAD 1242
>UniRef50_Q2PIN6 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 1187
Score = 32.7 bits (71), Expect = 2.5
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Frame = -2
Query: 329 SLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKL--- 159
++ V W+P+H G+ GNE D + T +Q R +
Sbjct: 988 NMQNRVQIHWIPAHIGVPGNEAADEAAREGATREGTQQTGEAICLAAAAKRQIRRSIKDR 1047
Query: 158 WESYWKLCSKHKGSWYAEIQKELPSKPWYDKYKGANERKFITIINRLR 15
W WK K + Y + E+P+K D YK + + + +II ++R
Sbjct: 1048 WIREWK-TEKTGPTTYRLV--EVPNKKILDLYKNLS-KSYASIIIQMR 1091
>UniRef50_UPI00015B4F8A Cluster: PREDICTED: similar to lachesin,
putative; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to lachesin, putative - Nasonia vitripennis
Length = 742
Score = 32.3 bits (70), Expect = 3.3
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -2
Query: 350 KIREALTSL--DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRV 207
+ R+AL SL V WVP H G+ G+E D + D C V
Sbjct: 165 RFRQALESLAEHNAVRLVWVPGHSGVVGDEKTDRLAGRGADGIRARRCAV 214
>UniRef50_UPI00015B4A79 Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 493
Score = 32.3 bits (70), Expect = 3.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 302 WVPSHRGIKGNEIVDGIVNSNYDED 228
WVP H GI+GNEI D + +D
Sbjct: 322 WVPGHHGIRGNEIADELAGIAAGQD 346
>UniRef50_UPI00006D02BF Cluster: hypothetical protein
TTHERM_00947360; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00947360 - Tetrahymena
thermophila SB210
Length = 1744
Score = 32.3 bits (70), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 248 NSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESY 147
NSNY E + F +F + KQR +K+W+SY
Sbjct: 65 NSNYVEGFFHRTTFDFEEFSDEKKQRFKKVWDSY 98
>UniRef50_Q04CJ1 Cluster: RNase H with double-stranded RNA/RNA-DNA
hybrid binding domain; n=2; Lactobacillus delbrueckii
subsp. bulgaricus|Rep: RNase H with double-stranded
RNA/RNA-DNA hybrid binding domain - Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
Length = 255
Score = 32.3 bits (70), Expect = 3.3
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 368 NNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDE 231
N L +I + + P F+WV H GN VDG++N D+
Sbjct: 210 NRELWQEIAKEMAKFAQP-EFEWVKGHANSAGNNFVDGLLNKYMDQ 254
>UniRef50_A7U4W3 Cluster: Putative uncharacterized protein; n=1;
Dunaliella viridis|Rep: Putative uncharacterized protein
- Dunaliella viridis
Length = 4640
Score = 32.3 bits (70), Expect = 3.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -2
Query: 377 HYRNNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIV--NSNYDEDHTNS 216
++ +++LL I + + + F V +H GI GNE D I ++ +DE H S
Sbjct: 4005 NHLHSHLLQPIVRIIENSPNTIHFYKVKAHAGIAGNEFADAIAKHSAQHDEGHDKS 4060
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 32.3 bits (70), Expect = 3.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVDGI 252
VT W+ +H G+KGNE DG+
Sbjct: 1499 VTLHWIKAHAGLKGNERADGL 1519
>UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 960
Score = 32.3 bits (70), Expect = 3.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 317 PVTFKWVPSHRGIKGNEIVD 258
P+ +W+P H GI GNE+ D
Sbjct: 772 PLQVRWIPGHSGIAGNELAD 791
>UniRef50_A6SD14 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 1039
Score = 32.3 bits (70), Expect = 3.3
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = -2
Query: 284 GIKGNEIVDGIVNSNYDEDHTNSCRVPF-TDFLFDLKQRSRKLWESYW--KLCSKHKGSW 114
G KGN ++ N+ E+ S ++P DFLFD+ R+L YW + +GSW
Sbjct: 156 GEKGNTSINEAGNN---EEADRSIKIPVHEDFLFDVDIEKRELAPVYWLGAIFDVRRGSW 212
Query: 113 Y 111
+
Sbjct: 213 F 213
>UniRef50_Q3KNE1 Cluster: Transmembrane phosphatase with tensin
homology; n=11; Murinae|Rep: Transmembrane phosphatase
with tensin homology - Mus musculus (Mouse)
Length = 664
Score = 31.9 bits (69), Expect = 4.4
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = -2
Query: 356 LYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLK 177
L + +EA + L P T + + + N + ++S+Y E+ N C++ L+D
Sbjct: 132 LLRDKEATSELKIPSTLQ---TQTSMSTNTLSLSDLSSDYQEEQMNKCKLNQMSKLYDDD 188
Query: 176 QRSRKLWESYWKLCSK 129
+R+ + +SYW + K
Sbjct: 189 ERT-DIQKSYWNVVKK 203
>UniRef50_Q9L9M4 Cluster: ORF32; n=29; Borrelia burgdorferi
group|Rep: ORF32 - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 148
Score = 31.9 bits (69), Expect = 4.4
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3
Query: 172 EVANYGKAIGNYAQSIKAVGMQKSKKNFQVSHGMINIKEPMNVN 41
E+ + I N I A+ SKKN QV +G IN+K PMN++
Sbjct: 106 ELVSMHTKIENLRAEIGALNKASSKKNKQVVNGEINLK-PMNIH 148
>UniRef50_Q9H717 Cluster: CDNA: FLJ21551 fis, clone COL06266; n=16;
Eutheria|Rep: CDNA: FLJ21551 fis, clone COL06266 - Homo
sapiens (Human)
Length = 371
Score = 31.9 bits (69), Expect = 4.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 293 SHRGIKGNEIVDGIVNSNYDEDHTNSCRVP 204
+H+ + G++ V+G + S YD+DHT VP
Sbjct: 208 NHKTVVGSKKVNGKIQSTYDQDHTVPAYVP 237
>UniRef50_A7F6Z7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 362
Score = 31.9 bits (69), Expect = 4.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 368 NNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVD 258
N K E + + ++ WVP H ++GNE+ D
Sbjct: 119 NQIRAIKAAEVIRAKGAEISLNWVPGHTSVEGNELAD 155
>UniRef50_A7EVG0 Cluster: Reverse transcriptase; n=8; Sclerotinia
sclerotiorum 1980|Rep: Reverse transcriptase -
Sclerotinia sclerotiorum 1980
Length = 1708
Score = 31.9 bits (69), Expect = 4.4
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 368 NNYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVD 258
N K E + + ++ WVP H ++GNE+ D
Sbjct: 1510 NQIRAIKAAEVIRAKGAEISLNWVPDHTSVEGNELAD 1546
>UniRef50_Q7Z7G0 Cluster: Target of Nesh-SH3 precursor; n=6;
Theria|Rep: Target of Nesh-SH3 precursor - Homo sapiens
(Human)
Length = 1075
Score = 31.9 bits (69), Expect = 4.4
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 293 SHRGIKGNEIVDGIVNSNYDEDHTNSCRVP 204
+H+ + G++ V+G + S YD+DHT VP
Sbjct: 215 NHKTVVGSKKVNGKIQSTYDQDHTVPAYVP 244
>UniRef50_A7KH12 Cluster: NapU4; n=2; Streptomyces|Rep: NapU4 -
Streptomyces aculeolatus
Length = 237
Score = 31.5 bits (68), Expect = 5.8
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = -2
Query: 365 NYLLYKIREALTSLDTPVT-FKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFL 189
N+LL++ REALT +DT +T +W + G D + D NS ++ FL
Sbjct: 148 NHLLHEEREALTLMDTTLTNEQWAAFGKEQSGRHTDDIPTYLPWLLDGMNSDQL--NQFL 205
Query: 188 FDLKQRSRKLWESYWKLCSKHKGSW 114
++ R +ES W++ W
Sbjct: 206 DNMPPPMRTAYESEWRIAYDDLDIW 230
>UniRef50_O44315 Cluster: Reverse transcriptase; n=1; Dugesiella
sp.|Rep: Reverse transcriptase - Dugesiella sp
Length = 743
Score = 31.5 bits (68), Expect = 5.8
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLC 135
V F W H +GN+I D + +P + F + + +LWE W+
Sbjct: 591 VRFFWTKGHATCEGNKIADSAAREASASGLSIEVPLPHSYFKSVTAKMAYRLWEQRWRAS 650
Query: 134 SKHKGSWYAEIQKELP-SKPW 75
+ GS + E+P SK W
Sbjct: 651 N---GSSATHLFIEVPTSKSW 668
>UniRef50_Q5KPB0 Cluster: Ribonuclease H, putative; n=2;
Filobasidiella neoformans|Rep: Ribonuclease H, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 321
Score = 31.5 bits (68), Expect = 5.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVDGIVNS 243
V FK+VP+H G++GNE D + +
Sbjct: 243 VKFKYVPAHSGVEGNEAADRLART 266
>UniRef50_P18096 Cluster: Gag-Pol polyprotein (Pr160Gag-Pol)
[Contains: Matrix protein p17 (MA); Capsid protein p24
(CA); Spacer peptide p2; Nucleocapsid protein p7 (NC);
Transframe peptide (TF); p6-pol (p6*); Protease (EC
3.4.23.47) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)];
n=258; Primate lentivirus group|Rep: Gag-Pol polyprotein
(Pr160Gag-Pol) [Contains: Matrix protein p17 (MA); Capsid
protein p24 (CA); Spacer peptide p2; Nucleocapsid protein
p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease
(EC 3.4.23.47) (Retropepsin) (PR); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7)
(EC 3.1.26.4) (p66 RT); p51 RT; p15; Integrase (IN)] -
Human immunodeficiency virus type 2 (isolate BEN subtype
A) (HIV-2)
Length = 1550
Score = 31.5 bits (68), Expect = 5.8
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -2
Query: 365 NYLLYKIREALTSLDTPVTFKWVPSHRGIKGNEIVDGIVN 246
N ++ +I E + + V WVP+H+GI GN+ VD +V+
Sbjct: 1125 NRIVNQIIEEMIKKEA-VYVAWVPAHKGIGGNQEVDHLVS 1163
>UniRef50_P32542 Cluster: Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]; n=28; Equine infectious anemia
virus|Rep: Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)] - Equine infectious anemia virus
(isolate CL22) (EIAV)
Length = 1146
Score = 31.5 bits (68), Expect = 5.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 314 VTFKWVPSHRGIKGNEIVD 258
V F WVP H+GI GN++ D
Sbjct: 714 VYFAWVPGHKGICGNQLAD 732
>UniRef50_UPI00015B486D Cluster: PREDICTED: similar to Lian-Aa1
retrotransposon protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to Lian-Aa1 retrotransposon protein -
Nasonia vitripennis
Length = 492
Score = 31.1 bits (67), Expect = 7.7
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -2
Query: 350 KIREALTSL--DTPVTFKWVPSHRGIKGNEIVDGIVNSNYDEDHTNSCRV 207
+ R+AL SL V WVP + G+ GNE D + D C V
Sbjct: 402 RCRQALESLAEHNAVRLVWVPRYSGVVGNEKADRLAGRGADGIRARRCAV 451
>UniRef50_O18558 Cluster: Lian-Aa1 retrotransposon protein; n=1; Aedes
aegypti|Rep: Lian-Aa1 retrotransposon protein - Aedes
aegypti (Yellowfever mosquito)
Length = 1189
Score = 31.1 bits (67), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 341 EALTSLDTPVTFKWVPSHRGIKGNEIVDGIVNSNYDED 228
E L S+++ V WVP H I GNE+ D + D
Sbjct: 1005 EELNSVNS-VNLVWVPGHSSIAGNELADELARDGASHD 1041
>UniRef50_A1Z6Z8 Cluster: CG2146-PC, isoform C; n=13; Coelomata|Rep:
CG2146-PC, isoform C - Drosophila melanogaster (Fruit
fly)
Length = 1800
Score = 31.1 bits (67), Expect = 7.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 254 IVNSNYDEDHTNSCRVPFTDFLFDLKQRSRKLWESYWKLCSKHK 123
+++ NY + + S V L + KQ+ + L E Y KL S+HK
Sbjct: 1144 LLSKNYSYNDSTSLVVKLRSILEEEKQKHKVLQEQYIKLSSRHK 1187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,172,752
Number of Sequences: 1657284
Number of extensions: 6658041
Number of successful extensions: 18718
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 18299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18715
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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