Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3a15
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...   281   1e-77
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.9  

>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score =  281 bits (690), Expect = 1e-77
 Identities = 134/204 (65%), Positives = 151/204 (74%)
 Frame = +3

Query: 60  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 239
           MGAYRY+QELYRKK SDVMR+LLRVR WQYRQ+TR HRAPRP RP + RRLGY+AK    
Sbjct: 1   MGAYRYVQELYRKKQSDVMRYLLRVRAWQYRQMTRFHRAPRPWRPTRLRRLGYKAKTGFS 60

Query: 240 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 419
                              TYGKPKSHGVNQLKP R LQS+AEE            +SYW
Sbjct: 61  IFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGGRLGGLRVLNSYW 120

Query: 420 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRY 599
           VAQD+++KYFEVI+VDP + AIRRDP +NWI NAVHKHRE+RGLTSAG+SSRGLGK +RY
Sbjct: 121 VAQDAAHKYFEVIMVDPPNNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGLGKAYRY 180

Query: 600 SQTKGGSRRAAWLRRNTLQLRRKR 671
           SQT GGSRRAA +RRN L LRR R
Sbjct: 181 SQTIGGSRRAAGVRRNRLHLRRYR 204


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 770 FFFSNNILLTHWLSICIQK*ANGKSLTVLDR 678
           F   N ILL  +L+I +   A+  SLT +++
Sbjct: 699 FICGNYILLNVFLAIAVDNLADADSLTTVEK 729


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,017
Number of Sequences: 2352
Number of extensions: 16016
Number of successful extensions: 45
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)