Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3a13
         (802 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7S6K2 Cluster: Predicted protein; n=1; Nematostella ve...    52   1e-05
UniRef50_Q8WY91-2 Cluster: Isoform 2 of Q8WY91 ; n=2; Amniota|Re...    52   2e-05
UniRef50_Q8WY91 Cluster: THAP domain-containing protein 4; n=18;...    52   2e-05
UniRef50_Q7Q0H8 Cluster: ENSANGP00000002070; n=2; Endopterygota|...    48   3e-04
UniRef50_Q0V9A7 Cluster: Putative uncharacterized protein MGC147...    46   0.001
UniRef50_UPI00015B4CEA Cluster: PREDICTED: similar to PP238; n=1...    44   0.004
UniRef50_UPI0000F2E317 Cluster: PREDICTED: similar to PP238, par...    42   0.014
UniRef50_Q4RVC1 Cluster: Chromosome 15 SCAF14992, whole genome s...    38   0.22 
UniRef50_UPI00015547E9 Cluster: PREDICTED: similar to PP238; n=1...    35   2.1  
UniRef50_Q59V21 Cluster: Putative uncharacterized protein; n=2; ...    35   2.1  
UniRef50_Q234Q2 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_A7S6K2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 169

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 22/52 (42%), Positives = 35/52 (67%)
 Frame = +1

Query: 301 LSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKLQ 456
           + R+SF KPP V + +RV+ ++  + L    +MET+TTP ++HL A YK+ Q
Sbjct: 116 IGRMSFGKPPAVLKTERVYMLVDENTLEFKQFMETETTPRTQHLQATYKRAQ 167



 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/55 (38%), Positives = 27/55 (49%)
 Frame = +3

Query: 3   ISCLEGRWSTTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIH 167
           +S L GRW   + RG YP I  F+  E +EF   G P   F S S +    A +H
Sbjct: 18  VSWLVGRWEG-EGRGEYPTIQPFTYRETVEFNNFGQPNLAFSSKSWNSKTNAPMH 71


>UniRef50_Q8WY91-2 Cluster: Isoform 2 of Q8WY91 ; n=2; Amniota|Rep:
           Isoform 2 of Q8WY91 - Homo sapiens (Human)
          Length = 165

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 24/53 (45%), Positives = 37/53 (69%)
 Frame = +1

Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
           ++++RISFAK P V++I R F++ S  +L  T+ M T T PM++HL   YKK+
Sbjct: 111 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 163



 Score = 34.7 bits (76), Expect = 2.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 70  ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 99



 Score = 33.5 bits (73), Expect = 6.3
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 13  LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 70


>UniRef50_Q8WY91 Cluster: THAP domain-containing protein 4; n=18;
           Euteleostomi|Rep: THAP domain-containing protein 4 -
           Homo sapiens (Human)
          Length = 577

 Score = 51.6 bits (118), Expect = 2e-05
 Identities = 24/53 (45%), Positives = 37/53 (69%)
 Frame = +1

Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
           ++++RISFAK P V++I R F++ S  +L  T+ M T T PM++HL   YKK+
Sbjct: 523 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 575



 Score = 34.7 bits (76), Expect = 2.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511



 Score = 33.5 bits (73), Expect = 6.3
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
           +S + G W S     G YP +  F   E++    VG PM NF   S HP  +  +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482


>UniRef50_Q7Q0H8 Cluster: ENSANGP00000002070; n=2;
           Endopterygota|Rep: ENSANGP00000002070 - Anopheles
           gambiae str. PEST
          Length = 161

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)
 Frame = +3

Query: 3   ISCLEGRWSTTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQKK 176
           I  L G W +   +G +P I  FS +E ++F+ +G P+ N+ + SRHP   A +H ++
Sbjct: 11  IQWLIGTWESVTAKGSFPTIKDFSYNEVIKFLSIGQPLLNYEAHSRHPESGAPMHLER 68



 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 298 NLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKK 450
           ++ R+SFAK P VK I++ + + ++  L     METDTTPM+ HL  VYK+
Sbjct: 109 SVERMSFAKDPAVKAIRKRYCLNADGTLEIQTDMETDTTPMTNHLRVVYKR 159



 Score = 47.2 bits (107), Expect = 5e-04
 Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEGPC-DTETH 280
           E+GFLRIKPGT+++ F+V+HN  L  LEEG   D E H
Sbjct: 67  ERGFLRIKPGTSQVAFMVAHNFGLAVLEEGEATDHELH 104


>UniRef50_Q0V9A7 Cluster: Putative uncharacterized protein
           MGC147467; n=2; Deuterostomia|Rep: Putative
           uncharacterized protein MGC147467 - Xenopus tropicalis
           (Western clawed frog) (Silurana tropicalis)
          Length = 502

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 21/53 (39%), Positives = 34/53 (64%)
 Frame = +1

Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
           N++SRISFAK P V +I R F++    +L  T++M T +  ++ HL   Y+K+
Sbjct: 448 NSVSRISFAKEPHVTQISRKFRLTPEGKLEQTVFMATASQSLAPHLHVTYRKV 500



 Score = 38.7 bits (86), Expect = 0.17
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEGPCDTE 274
           E GF+RIKPGTN + F+ + N  +  +EEG  + E
Sbjct: 407 ECGFIRIKPGTNHVAFISAQNTGVVEVEEGEVEGE 441


>UniRef50_UPI00015B4CEA Cluster: PREDICTED: similar to PP238; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to PP238 -
           Nasonia vitripennis
          Length = 170

 Score = 44.0 bits (99), Expect = 0.004
 Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +1

Query: 310 ISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTP-MSEHLMAVYKK 450
           I  +KPP V +IKR  K L  D L  T+YM T+T P ++EHL AVYK+
Sbjct: 117 IEGSKPPAVLQIKRELK-LVEDALHQTVYMSTETRPELTEHLHAVYKR 163



 Score = 42.3 bits (95), Expect = 0.014
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   ISCLEGRWSTTDT-RGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
           ++ LEG W T     G +P I  F   E++ F  +G PM N+ + S HP K+  +H++
Sbjct: 13  LAWLEGVWRTESLGSGKFPTINSFKYCEEITFSSIGQPMLNYTAQSWHPEKKNPMHRE 70



 Score = 37.5 bits (83), Expect = 0.39
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
           E GFL+I P TN+++  +SHN  LT +EEG
Sbjct: 70  EVGFLKIVPNTNKVSLFLSHNFGLTTVEEG 99


>UniRef50_UPI0000F2E317 Cluster: PREDICTED: similar to PP238,
           partial; n=1; Monodelphis domestica|Rep: PREDICTED:
           similar to PP238, partial - Monodelphis domestica
          Length = 411

 Score = 42.3 bits (95), Expect = 0.014
 Identities = 18/53 (33%), Positives = 36/53 (67%)
 Frame = +1

Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
           ++++R+S A  P V++I R F++ ++ +L  T+ M T + PM++HL   YK++
Sbjct: 342 HSIARMSLAAEPPVEQIMRTFRLTTDGRLEQTVSMATSSQPMTQHLHITYKRV 394



 Score = 33.9 bits (74), Expect = 4.8
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
           E GF+R+KP +N++ FV + N  +  +EEG
Sbjct: 301 ECGFIRLKPDSNKVAFVSAQNTGIVEMEEG 330



 Score = 33.1 bits (72), Expect = 8.4
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
           +S + G W S     G YP++  F   E++    VG PM NF   + HP  +  +H++
Sbjct: 244 LSWMLGTWLSEPPGHGVYPSLQPFHYLEEVHISHVGQPMLNFSFNAFHPDTKKPMHRE 301


>UniRef50_Q4RVC1 Cluster: Chromosome 15 SCAF14992, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
           SCAF14992, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 186

 Score = 38.3 bits (85), Expect = 0.22
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
           E GF+R++PGTN + F+++ N  L  +EEG
Sbjct: 66  ECGFIRMQPGTNRVAFIIAQNSGLVEIEEG 95


>UniRef50_UPI00015547E9 Cluster: PREDICTED: similar to PP238; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           PP238 - Ornithorhynchus anatinus
          Length = 420

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
           E GF+R+KP TN++ FV + N  +  +EEG
Sbjct: 109 ECGFIRLKPDTNKVAFVSAQNTGIVEVEEG 138


>UniRef50_Q59V21 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 156

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 376 QL*ATLYMETDTTPMSEHLMAVYKKLQYILF*YTHTTIALSIIGSC-QVRQFIFHPHSIK 552
           QL   LY  +  TP+   +  +Y  + Y LF   +  + +S+  SC ++ QF FHPH  K
Sbjct: 48  QLLILLYNSSYMTPLDIFIENMYPTINYYLFANFNFEVDISL--SCMKISQFFFHPHISK 105

Query: 553 TLDKGV 570
            +   +
Sbjct: 106 IMSSSI 111


>UniRef50_Q234Q2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 641

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 113 HAQFPIDVKAPLEAGIDTSEKGFLRIKPGTNELTFVVSHNCRLTPLEEGPCDTETHKVIL 292
           H Q   D K  + A +DTS+K FL I PGT EL     ++ R         DTE    I 
Sbjct: 276 HQQGVFDEKN-VAAFLDTSKKSFLEIIPGTQELVENFIYSLRYNNFS----DTEISSQIT 330

Query: 293 E-TIYLEFHL 319
           E T YL ++L
Sbjct: 331 EYTPYLTYNL 340


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,402,568
Number of Sequences: 1657284
Number of extensions: 15083736
Number of successful extensions: 30560
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 29661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30553
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)