Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc3a13
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.70 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.70 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.93 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.93 

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 180 KPFSDVSMPASKGALTSIGNCAWG 109
           KP+ DV +P ++  L SIG  A G
Sbjct: 163 KPYIDVVVPITQFTLLSIGETAMG 186


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 180 KPFSDVSMPASKGALTSIGNCAWG 109
           KP+ DV +P ++  L SIG  A G
Sbjct: 163 KPYIDVVVPITQFTLLSIGETAMG 186


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 762 HNI*QYFFK*FYIVFQSSSSY 700
           H I  YF   FY+VF S S++
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTF 44


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 762 HNI*QYFFK*FYIVFQSSSSY 700
           H I  YF   FY+VF S S++
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTF 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,782
Number of Sequences: 336
Number of extensions: 4269
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)