BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a13
(802 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein. 25 3.6
AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein. 25 3.6
AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein. 25 3.6
AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein. 25 3.6
AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein. 25 3.6
AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein. 25 3.6
AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse t... 24 6.3
AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15 prot... 23 8.3
>AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 89 GVYMRWSPHAQFPI 130
GVY W PH + P+
Sbjct: 34 GVYKSWEPHERLPV 47
>AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 89 GVYMRWSPHAQFPI 130
GVY W PH + P+
Sbjct: 34 GVYKSWEPHERLPV 47
>AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 89 GVYMRWSPHAQFPI 130
GVY W PH + P+
Sbjct: 34 GVYKSWEPHERLPV 47
>AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 89 GVYMRWSPHAQFPI 130
GVY W PH + P+
Sbjct: 34 GVYKSWEPHERLPV 47
>AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 89 GVYMRWSPHAQFPI 130
GVY W PH + P+
Sbjct: 34 GVYKSWEPHERLPV 47
>AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 24.6 bits (51), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +2
Query: 89 GVYMRWSPHAQFPI 130
GVY W PH + P+
Sbjct: 34 GVYKSWEPHERLPV 47
>AJ970243-1|CAI96715.1| 129|Anopheles gambiae putative reverse
transcriptase protein.
Length = 129
Score = 23.8 bits (49), Expect = 6.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 462 NILKFFVNCHQMFT 421
N++KF NCH FT
Sbjct: 47 NLVKFVSNCHAAFT 60
>AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15
protein.
Length = 250
Score = 23.4 bits (48), Expect = 8.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 576 YDIVYREGSFEAHSLLTAKQFISALDVDITAKVSYFEKHLF 698
YD+ YR G ++ + + Q A+D IT +V+ HLF
Sbjct: 171 YDL-YRAGVYDEYLMGLMNQVAQAMDDSITQEVT---NHLF 207
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,845
Number of Sequences: 2352
Number of extensions: 16687
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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