Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a13
(802 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094822-1|AAH94822.1| 330|Homo sapiens THAP4 protein protein. 52 3e-06
BC071896-1|AAH71896.1| 330|Homo sapiens THAP4 protein protein. 52 3e-06
BC069235-1|AAH69235.1| 577|Homo sapiens THAP domain containing ... 52 3e-06
BC009439-1|AAH09439.1| 252|Homo sapiens THAP4 protein protein. 52 3e-06
BC000247-1|AAH00247.1| 252|Homo sapiens THAP4 protein protein. 52 3e-06
AK001216-1|BAA91560.1| 252|Homo sapiens protein ( Homo sapiens ... 52 3e-06
AF258556-1|AAG23759.1| 577|Homo sapiens PP238 protein. 52 3e-06
AF132970-1|AAD27745.1| 165|Homo sapiens CGI-36 protein protein. 52 3e-06
AC133528-4|AAY14918.1| 577|Homo sapiens unknown protein. 52 3e-06
BC001842-1|AAH01842.1| 169|Homo sapiens THAP4 protein protein. 33 0.91
BC000767-1|AAH00767.1| 169|Homo sapiens THAP4 protein protein. 33 0.91
DQ012020-1|AAY59756.1| 102|Homo sapiens beta-defensin 116 protein. 30 8.5
>BC094822-1|AAH94822.1| 330|Homo sapiens THAP4 protein protein.
Length = 330
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 276 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 328
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 235 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 264
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 178 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 235
>BC071896-1|AAH71896.1| 330|Homo sapiens THAP4 protein protein.
Length = 330
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 276 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 328
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 235 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 264
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 178 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 235
>BC069235-1|AAH69235.1| 577|Homo sapiens THAP domain containing 4
protein.
Length = 577
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 523 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 575
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482
>BC009439-1|AAH09439.1| 252|Homo sapiens THAP4 protein protein.
Length = 252
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 198 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 250
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 157 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 186
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157
>BC000247-1|AAH00247.1| 252|Homo sapiens THAP4 protein protein.
Length = 252
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 198 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 250
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 157 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 186
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157
>AK001216-1|BAA91560.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ10354 fis, clone NT2RM2001194. ).
Length = 252
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 198 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 250
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 157 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 186
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157
>AF258556-1|AAG23759.1| 577|Homo sapiens PP238 protein.
Length = 577
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 523 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 575
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482
>AF132970-1|AAD27745.1| 165|Homo sapiens CGI-36 protein protein.
Length = 165
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 111 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 163
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 70 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 99
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 13 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 70
>AC133528-4|AAY14918.1| 577|Homo sapiens unknown protein.
Length = 577
Score = 51.6 bits (118), Expect = 3e-06
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 295 NNLSRISFAKPPFVKRIKRVFKVLSNDQL*ATLYMETDTTPMSEHLMAVYKKL 453
++++RISFAK P V++I R F++ S +L T+ M T T PM++HL YKK+
Sbjct: 523 HSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHVTYKKV 575
Score = 34.7 bits (76), Expect = 0.39
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 170 EKGFLRIKPGTNELTFVVSHNCRLTPLEEG 259
E GF+R+KP TN++ FV + N + +EEG
Sbjct: 482 ECGFIRLKPDTNKVAFVSAQNTGVVEVEEG 511
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 425 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 482
>BC001842-1|AAH01842.1| 169|Homo sapiens THAP4 protein protein.
Length = 169
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157
>BC000767-1|AAH00767.1| 169|Homo sapiens THAP4 protein protein.
Length = 169
Score = 33.5 bits (73), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 3 ISCLEGRW-STTDTRGYYPNIPGFSCHEDLEFICVGHPMHNFLSMSRHP*KQASIHQK 173
+S + G W S G YP + F E++ VG PM NF S HP + +H++
Sbjct: 100 LSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPDTRKPMHRE 157
>DQ012020-1|AAY59756.1| 102|Homo sapiens beta-defensin 116 protein.
Length = 102
Score = 30.3 bits (65), Expect = 8.5
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 534 EYELSYLTAPNDRQC 490
EYE+ YLT PND++C
Sbjct: 53 EYEIQYLTCPNDQKC 67
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,191,797
Number of Sequences: 237096
Number of extensions: 2274994
Number of successful extensions: 11386
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 11269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11385
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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