Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc3a02
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10) 50 2e-06
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 50 2e-06
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 49 4e-06
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31) 44 1e-04
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 44 1e-04
SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16) 44 1e-04
SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25) 44 1e-04
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 41 0.001
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 40 0.002
SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36) 40 0.002
SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27) 39 0.003
SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15) 39 0.004
SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19) 39 0.004
SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06) 37 0.012
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 34 0.084
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 33 0.15
SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32) 33 0.26
SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08) 32 0.34
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 32 0.34
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 29 2.4
SB_17109| Best HMM Match : LRR_1 (HMM E-Value=2.9e-10) 29 2.4
SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06) 29 3.2
SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017) 29 3.2
SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074) 28 5.5
SB_49794| Best HMM Match : CBS (HMM E-Value=2.8) 28 7.3
SB_3708| Best HMM Match : DUF374 (HMM E-Value=2.2) 28 7.3
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 375 TIVVSLNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNH 548
T + SLNL N +S L R ++ L +L+ LDLS N+++ + D F +++LQ L L N
Sbjct: 92 TALRSLNLGANRLSVLPRSVFRDLASLRSLDLSANRLSSLPEDTFEGLSSLQDLFLDFNR 151
Query: 549 ISNVYKEMFKSLINLERLILAQNQISVMA 635
+ + + F L L+RL L N + +
Sbjct: 152 LRAIPETTFHGLAALQRLRLHNNNLKTFS 180
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 390 LNLSGNAISTLSRELYL--PNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQN-HISNV 560
L L+ N I+ L + L+ P+L+ L +S N + + FY+++ K+ L N + +
Sbjct: 217 LYLNNNNITELDQRLFTRTPSLKLLFVSFNSLATLPRGLFYSLSTDAKVSLHNNPFVCDC 276
Query: 561 YKEMFKSLINLERLILAQNQI 623
K I LI + N I
Sbjct: 277 KLSWLKQWIRTRSLIYSLNLI 297
>SB_51625| Best HMM Match : LRR_1 (HMM E-Value=2.7e-10)
Length = 212
Score = 50.0 bits (114), Expect = 2e-06
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Frame = +3
Query: 228 YCPSLCVCKSNK-AGEGASAEPLPGELKLKCGGSPAPITELKEIDLSKLWTIVVSLNLSG 404
YCP+ C C K AGE L + + C G L+ L L +L L+
Sbjct: 73 YCPAKCECSREKIAGE------LSTGILVNCTG-----RRLRNFPL-PLPPRTSTLLLND 120
Query: 405 NAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFK 578
N +S L + + L N++ L+L RN I IE AF N+TAL+ L L +N + F+
Sbjct: 121 NRLSLLRYDFFLGLNNIRTLNLRRNGIKEIEFGAFRNLTALESLYLFRNRFFGIGPNAFE 180
Query: 579 SLINLERLILAQNQIS 626
L L+ L L N+++
Sbjct: 181 RLTALQVLSLVDNRLT 196
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 387 SLNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNV 560
+LNL N I + + L L+ L L RN+ I +AF +TALQ L L N ++ +
Sbjct: 139 TLNLRRNGIKEIEFGAFRNLTALESLYLFRNRFFGIGPNAFERLTALQVLSLVDNRLTGL 198
Query: 561 YKEMFKSLINL 593
+ MF L +L
Sbjct: 199 TRSMFSGLKSL 209
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +3
Query: 447 LQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQIS 626
L+ LDLS N I+ I+ F N+ L++L+L +N I V MFK L++LE+L L N +
Sbjct: 95 LKWLDLSNNDISDIQDGTFENLRYLKQLNLGENKIRTVSASMFKGLVSLEKLDLRFNDLK 154
Query: 627 VM 632
+
Sbjct: 155 AL 156
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVY 563
L+++ N+++T+ + L++LDLS N I+ + S AF N + LQKL L N I ++
Sbjct: 244 LHINNNSLTTVPLHALRKVKFLKELDLSANLISYVSSTAFANNSKLQKLLLHNNTIRLIH 303
Query: 564 KEMFKSLINLERLILAQN 617
++ F L L L L N
Sbjct: 304 EDAFSQLKGLRALFLRGN 321
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVY 563
L+LS N IS + + L L++L+L N+I + + F + +L+KLDL N + +
Sbjct: 98 LDLSNNDISDIQDGTFENLRYLKQLNLGENKIRTVSASMFKGLVSLEKLDLRFNDLKALP 157
Query: 564 KEMFKSLINLERLILAQNQ 620
+ +FK L +L L L N+
Sbjct: 158 RGVFKPLKSLRELFLHDNR 176
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +3
Query: 408 AISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLI 587
A++T SR +P +Q + L N+I IE+ AF L+ +DLS N I + K + K L+
Sbjct: 343 AVTTKSR---IPKVQVMYLKNNKIVAIENGAF--PLNLRVMDLSNNKIGRIDKIVLKDLV 397
Query: 588 NLERLILAQNQISVM 632
NL L+L NQ++++
Sbjct: 398 NLNSLLLNNNQLTIL 412
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 456 LDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
L+ + ++ I D F+N+TAL+K L +N + + F L NLE + + NQI
Sbjct: 91 LEFIKTSLSSIADDVFHNLTALEKFILIENELDWIPDNWF-DLPNLEYMSVDNNQI 145
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVY 563
++LS N I + + + L NL L L+ NQ+T++ + ++ + +LDL N ++ +
Sbjct: 378 MDLSNNKIGRIDKIVLKDLVNLNSLLLNNNQLTILPNGGDFHNKQIDRLDLKNNRLTTIA 437
Query: 564 KEMFKSLINLERLILAQNQIS 626
F + I +NQ+S
Sbjct: 438 PNTFVN-ITCNGFSCNKNQLS 457
Score = 34.7 bits (76), Expect = 0.064
Identities = 23/63 (36%), Positives = 31/63 (49%)
Frame = +3
Query: 444 NLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
NL LDL NQI I T L+ L L N+I+ + K++FK L L + N I
Sbjct: 640 NLVVLDLQFNQIPTINVGELNVFTGLRDLFLQNNNITELGKDLFKYNTVLGTLNIDNNAI 699
Query: 624 SVM 632
V+
Sbjct: 700 QVV 702
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 447 LQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNV 560
L L+LS N I I S+AF + L+ LDL N +S +
Sbjct: 163 LVHLNLSNNAIESIASEAFSQLIHLKVLDLRHNKLSTI 200
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +3
Query: 381 VVSLNLSGNAISTLSRELY--LPNLQKLDLSRNQITLI 488
+V LNLS NAI +++ E + L +L+ LDL N+++ I
Sbjct: 163 LVHLNLSNNAIESIASEAFSQLIHLKVLDLRHNKLSTI 200
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/73 (21%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 348 KEIDLSKLWTIVVSLNLSGNAISTLSRELYL-----PNLQKLDLSRNQITLIESDAFYNM 512
+ + + ++ + + +L+L N I ++ +++ +++ LDLS N+I ++ DAF +
Sbjct: 556 QNVKVGQIGSGLATLHLQNNKIQAITSKIFGNSGSGSSIRILDLSYNEIRTLKEDAFAGL 615
Query: 513 TALQKLDLSQNHI 551
++ K+ L N +
Sbjct: 616 SSSYKVMLRNNKL 628
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 45.2 bits (102), Expect = 5e-05
Identities = 36/95 (37%), Positives = 54/95 (56%)
Frame = +3
Query: 339 TELKEIDLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTA 518
+++ I KL + +V+LNL N IS + +L NL+ LDLS NQI+ IE ++
Sbjct: 22 SQITSIKSLKLHSNLVTLNLHSNHISKIEGLQHLQNLRHLDLSSNQISHIE--GLTSLGY 79
Query: 519 LQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
L+ L+LS N I V E ++L L +L L+ N I
Sbjct: 80 LRVLNLSCNRIYLV--EGLENLRKLTKLDLSYNFI 112
>SB_38674| Best HMM Match : TIR (HMM E-Value=2.5e-31)
Length = 870
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKE 569
L L N I LS+ + +LQKL + N + +I F N++ + +DLS N I + ++
Sbjct: 266 LVLDYNQIRNLSQYPFTGHLQKLSIKGNGLRVIGGSCFSNLSGVNIIDLSNNEIRDFPEQ 325
Query: 570 MFKSLI--NLERLILAQNQIS 626
+F+ + NLE L+ N I+
Sbjct: 326 LFRVFLLRNLESADLSSNAIT 346
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 384 VSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHI 551
+ +NL GNAI L YL N+ L+LS N+I + ++ + L ++ N +
Sbjct: 520 LEVNLRGNAIRELPWRHYLGNITVLELSNNEIKELNMTFVDSLARVVNLAINDNKL 575
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 381 VVSLNLSGNAISTLSRELY-LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISN 557
+ L+L N + L + L NL+ LD+ +N+I ++ D+F N++ L L LS+NH++
Sbjct: 336 LTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEMLP-DSFCNLSKLWFLQLSKNHLTE 394
Query: 558 VYKEMFKSLINLERLILAQNQIS 626
+ E F +L +L L L NQ+S
Sbjct: 395 L-PENFGNLTSLVELRLDSNQLS 416
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +3
Query: 357 DLSKLWTIVVSLNLSGNAISTLSREL-YLPNLQKLDLSRNQITLIESDAFYNMTALQKLD 533
+LSKLW L LS N ++ L L +L +L L NQ++ + + +F N+T ++ LD
Sbjct: 378 NLSKLWF----LQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPA-SFANLTNVKTLD 432
Query: 534 LSQNHISNVYKEMFKSLINLERLILAQNQISVMA 635
L +N +S + + + K L NL RL L N++ + A
Sbjct: 433 LYRNKLSEIPRVLLK-LENLMRLDLDGNKLKIKA 465
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 495 DAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQISVM 632
D+F M L KL L +N + + + F L+NLE L + QN+I ++
Sbjct: 328 DSFSQMANLTKLHLDENQVVCLPDD-FGDLVNLEWLDVGQNRIEML 372
>SB_51747| Best HMM Match : LRR_1 (HMM E-Value=2.5e-16)
Length = 288
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +3
Query: 372 WTIVVSLNLSGNAISTLSREL-YLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNH 548
WT + +LNLS N I + L LP L+ LDLS N+ ++ + +L +LDLS N
Sbjct: 79 WTHLTNLNLSHNKIVVIDESLRLLPALESLDLSFNEFESLDLQE-VDCPSLTQLDLSHNS 137
Query: 549 ISNVYKEMFKSLINLERLILAQNQISVMA 635
I V + L +L+ LIL N + ++
Sbjct: 138 IQFV-SATPRDLRHLKSLILNHNNLQSLS 165
>SB_55784| Best HMM Match : CUB (HMM E-Value=3.1e-25)
Length = 418
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 405 NAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFK 578
N IS+L+ Y L L DLS N IT + + AF N+T+L DLS+N ++ + F
Sbjct: 234 NRISSLTERNYHYLQYLLHFDLSFNIITNLNARAFTNVTSLDTFDLSRNLLTKLENGAFD 293
Query: 579 SLINLERLIL 608
L NL LI+
Sbjct: 294 GLTNLNVLIV 303
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +3
Query: 444 NLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
++ L+L N I ++ TAL++LDLS+N +++ F L +LE L L++N+I
Sbjct: 62 DITALNLGYNNIVDLDPKQLLKFTALKELDLSRNFFTSILASAFNRLSSLEVLKLSKNRI 121
Query: 624 SVM 632
S +
Sbjct: 122 STI 124
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 354 IDLSKLWTIV--VSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQK 527
+ + LW+ V +L L N I + L NLQ LDLS N I +IE +T L+
Sbjct: 56 LKIDNLWSFVNLTTLQLDNNIIEKIEGLDMLVNLQWLDLSFNNIEVIE--GLDKLTKLKD 113
Query: 528 LDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
L L N I+ + E SL NL + N +
Sbjct: 114 LTLYNNRITKI--ENMDSLTNLHVFSIGNNSL 143
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRE--LYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVY 563
LN + N I+ + E +YLP+L LDLS N+I + D+F + L+ L ++ N + +
Sbjct: 65 LNFAFNCITAVPYEFSMYLPHLVHLDLSYNRIGFL-PDSFGYLFHLETLFINNNKLREL- 122
Query: 564 KEMFKSLINLERLILAQNQI 623
+ F L L++L L+ NQ+
Sbjct: 123 PDTFCYLARLQKLDLSHNQL 142
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3
Query: 435 YLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILA 611
YL LQKLDLS NQ+ + + M +L +++S N + + + KS +LILA
Sbjct: 128 YLARLQKLDLSHNQLLHLPENIGL-MESLLSINVSYNELEALPASISKS--KTLKLILA 183
>SB_38600| Best HMM Match : Ank (HMM E-Value=6.9e-36)
Length = 852
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +3
Query: 447 LQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQIS 626
LQKLDLS N+IT + T+LQ L+LS N+IS V K + + +L L L+ N++S
Sbjct: 623 LQKLDLSNNRITSVPVGMPCLATSLQTLNLSGNNISEV-KTLAQFPSSLSSLDLSNNRLS 681
Score = 29.5 bits (63), Expect(2) = 0.12
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 369 LWTIVVSLNLSGNAISTLSRELYLP-NLQKLDLSRNQIT 482
L T + +LNLSGN IS + P +L LDLS N+++
Sbjct: 643 LATSLQTLNLSGNNISEVKTLAQFPSSLSSLDLSNNRLS 681
Score = 23.0 bits (47), Expect(2) = 0.12
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +3
Query: 465 SRNQITLIESDAFYNMTALQKLDLSQNHISNV 560
SRN++ + ++ L++LDL++N+I +
Sbjct: 717 SRNRVRYCKHTRHRLLSQLKRLDLNKNNIKEI 748
>SB_20569| Best HMM Match : LRR_1 (HMM E-Value=1.1e-27)
Length = 309
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +3
Query: 360 LSKLWTIVVSLNLSGNAISTLSREL-YLPNLQKLDLSRNQITLIESDAFYNMTALQKLDL 536
L KL + + L L+ N I EL YL L++L L NQ+TL+ S F +T L+ L L
Sbjct: 64 LKKLKHVQILL-LNDNQIIMPPVELVYLSRLRELCLDHNQLTLLPS-GFGRLTNLKVLCL 121
Query: 537 SQNHISNVYKEMFKSLINLERLILAQNQISVM 632
S N++ + E+ + L+ LE L + Q+ +
Sbjct: 122 SHNNLGYLASEICE-LVQLEELWIINTQLMAL 152
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 390 LNLSGNAISTLSRELY--LPNLQKLDLSRNQITLI 488
L+L GN I +L+ LP L K+D+ NQ+TL+
Sbjct: 234 LSLRGNCIKSLADNCVEGLPKLCKVDIRDNQVTLL 268
>SB_21029| Best HMM Match : PX (HMM E-Value=9.1e-15)
Length = 1466
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/90 (30%), Positives = 47/90 (52%)
Frame = +3
Query: 357 DLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDL 536
+L L + SLN S N I ++ L L+ LDLS N++ I ++ + ++KL+L
Sbjct: 964 NLESLLPNIESLNWSHNCIEEINHLESLSELEVLDLSHNKLRAIPTNLNAKLGNIRKLNL 1023
Query: 537 SQNHISNVYKEMFKSLINLERLILAQNQIS 626
+ N +S V + + L +L L L N ++
Sbjct: 1024 ANNQLSCV--DGLEKLYSLVELDLRSNLLT 1051
>SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +3
Query: 351 EIDLSKLWTIVVSLNLSGNAISTLS-RELYLPNLQKLDLSRNQITLIES-DAFYNMTALQ 524
E ++ + T + L+LS N + L ++++LP+L KL+L+ NQ+ +E AF N+ L
Sbjct: 41 ESEILQQLTAIEELDLSNNKLVKLQLQDVFLPSLTKLNLANNQLATLEGFTAFPNLVDLN 100
Query: 525 KLDLSQNHISNVYK 566
+ + +S YK
Sbjct: 101 ITNNPKIEVSEKYK 114
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +3
Query: 396 LSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNV-YKEM 572
L+ I +S+ L + L L ++ IES+ +TA+++LDLS N + + +++
Sbjct: 10 LTAEKIREVSKASDLSAIDTLSLQGQGLSQIESEILQQLTAIEELDLSNNKLVKLQLQDV 69
Query: 573 FKSLINLERLILAQNQISVM 632
F L +L +L LA NQ++ +
Sbjct: 70 F--LPSLTKLNLANNQLATL 87
>SB_22441| Best HMM Match : LRR_1 (HMM E-Value=1.8e-19)
Length = 261
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRELYLPN--LQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVY 563
L++ N + + +L L +L L N++ I + LQ+L LS+N I+ +Y
Sbjct: 89 LSVENNFMEVIENGTFLRQALLDELYLGYNKLERITRGTLEGLRDLQRLRLSKNTITRLY 148
Query: 564 KEMFKSLINLERLILAQNQI 623
K F+SL L L LA N+I
Sbjct: 149 KGAFESLHMLTVLELADNEI 168
Score = 33.5 bits (73), Expect = 0.15
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 387 SLNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNV 560
+L L GN I S LP+L D+S N+I IE +F + L L ++ I +
Sbjct: 184 TLFLGGNLIKFFSSSTLGNLPSLTLFDISFNKIEEIEEGSFLELPNLSTLHMNDCKIRKI 243
Query: 561 -YKEMFKSLINLERL 602
+E FK L L+ L
Sbjct: 244 PAREPFKGLRKLKEL 258
>SB_19770| Best HMM Match : LRR_1 (HMM E-Value=1.7e-06)
Length = 239
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 381 VVSLNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHI 551
+++++LS N + + + + L +L+ ++LSRN I +E +AF AL K+D S N +
Sbjct: 97 LMTVDLSRNLLKRVFKHYFSGLEDLKSVNLSRNVIECVEREAFEGCKALSKVDFSGNRL 155
Score = 35.1 bits (77), Expect = 0.048
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 432 LYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILA 611
L L L+ L L+ N+I+ I L +DLS+N + V+K F L +L+ + L+
Sbjct: 68 LDLTKLRGLYLTNNKISPIFEGTITTCVRLMTVDLSRNLLKRVFKHYFSGLEDLKSVNLS 127
Query: 612 QNQI 623
+N I
Sbjct: 128 RNVI 131
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 34.3 bits (75), Expect = 0.084
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 444 NLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
NL LDLS ++ + +T L+ L L + IS + +E F+ LINL L L NQ+
Sbjct: 82 NLNSLDLSFQNLSNFPT-GLLELTQLEYLYLKGSQISALPEEFFRKLINLVWLDLRDNQL 140
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +3
Query: 369 LWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNH 548
L T + LN N I + L L +L+ L L N +T + F + L+ LDL NH
Sbjct: 17 LGTTTLDLNRK-NLIEIPPKVLDLQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNH 75
Query: 549 ISNVYKEMFKSLINLERLILAQNQISVM 632
I+ V E + L+ L+L N I +
Sbjct: 76 INEV-PENLGAHRCLKNLLLEGNNIRTL 102
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 345 LKEIDLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQ-ITLIESDAFYNMTAL 521
+K+I+ + + LNL+ N I ++ P LQ++DL NQ I + E + L
Sbjct: 181 IKKIENLETLKTLQKLNLASNCIRSMKGLQGHPMLQEVDLQENQIIDIAEVRYIRELKLL 240
Query: 522 QKLDLSQNHISNVYKEMFKSLINLERLI 605
+ L+L N I ++ L ++ L+
Sbjct: 241 RNLNLQSNPIQSLPDYRLSLLFRIQTLL 268
>SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32)
Length = 1206
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +3
Query: 381 VVSLNLSGNAISTLSRELY--LPNLQKLDLSRNQITLIESDAFYNMTALQKLDL 536
+V ++ N I + ++ + +LQ L+L N+IT I+ D F ++T L+KL +
Sbjct: 1115 LVPTDIGNNLIKDIPSGVFANVRDLQVLNLHNNEITTIDEDTFTDLTNLKKLTM 1168
>SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +3
Query: 360 LSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLS 539
L KL T + LNLS N+I+ L L +LQ L++SRNQI + + + L+ +
Sbjct: 146 LDKL-TQLRELNLSRNSITKLEGLESLVHLQVLNISRNQIQTLPAPLMKKLRELRVFHFA 204
Query: 540 QNHISN 557
N + +
Sbjct: 205 YNSLES 210
>SB_13883| Best HMM Match : 7tm_1 (HMM E-Value=6e-08)
Length = 535
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 447 LQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
+ LDLS NQ+ +I F + ++ L L+ N + + L +L L LA N++
Sbjct: 28 IHSLDLSSNQLKIIPEFVFRGFSNVKNLTLADNDLEEIGNASLSGLKSLLYLNLANNKL 86
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +3
Query: 336 ITELKEIDLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMT 515
I +L ++ L ++ SL L GNAI+ + E L K D S+N I ++
Sbjct: 3907 IRQLTPVEFRVLHLLIHSLLLMGNAINLIDNEKLAKFLFKDDDSKNAIAFCLEHVTNDLQ 3966
Query: 516 ALQKLDLSQN 545
AL KL S N
Sbjct: 3967 ALCKLLCSNN 3976
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 32.3 bits (70), Expect = 0.34
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Frame = +3
Query: 123 WRSAIV*TANLSEIGTMKWFEIFIMSLLCANGVLSYCPSLC-VCKSNKAGEGASAEPLPG 299
WR + + S + ++W E ++S G+ + L +C+ + P G
Sbjct: 354 WRKLGLRELDSSLLKKIRWPEKLVLSSNLLAGISNSIVDLDRLCRLDLQKNKLRKIP-SG 412
Query: 300 ELKLKCGGSPAPITELKEIDLS-KLWTIVV-SLNLSGNAISTLSRELYLPNLQKLDLSRN 473
LK+ C +++ + DL K W+ V+ +L LSGN + TL + L L L+RN
Sbjct: 413 LLKMTCL-KYLDLSDNELTDLPRKEWSPVLKTLYLSGNLLETLPDSMASAKLVNLYLARN 471
Query: 474 QITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLIL 608
++ + + + L+ LDLS N+ E L + L L
Sbjct: 472 RLYEVPA-CVCELLTLEILDLSDNNRLTRLPEKMGKLTKISTLRL 515
>SB_47414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/82 (25%), Positives = 46/82 (56%)
Frame = +3
Query: 387 SLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYK 566
+LNL+ NA++T+ NL +LD+S N++ + + +N+ + ++ + N I +
Sbjct: 114 TLNLNCNALTTVPPLRNAKNLARLDISHNRLESL-PEGIFNLELIAEIYAANNLIQALGN 172
Query: 567 EMFKSLINLERLILAQNQISVM 632
E+ L L+ L L++N++ +
Sbjct: 173 EV-GCLHVLKVLDLSENKLEAI 193
>SB_18178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 444 NLQKLDLSRNQITLIESDAFYNMTALQKL 530
+LQKLDL N+IT IE F N+ +L +L
Sbjct: 461 DLQKLDLRGNRITTIEPFTFANLNSLTEL 489
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 435 YLPNLQ-KLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERL 602
YLP+ + L + +I ++ +F LQKLDL N I+ + F +L +L L
Sbjct: 433 YLPHTTTSMYLIKKRIKQLQPYSFERYGDLQKLDLRGNRITTIEPFTFANLNSLTEL 489
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/81 (29%), Positives = 42/81 (51%)
Frame = +3
Query: 381 VVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNV 560
+ LNL GN ++ L + L++L +S N++T +E +M L+ LD S N ++ +
Sbjct: 872 ITVLNLHGNGLNRLKFINSMTALKRLIVSFNELTRLED--VNHMLFLEHLDASFNKLTTL 929
Query: 561 YKEMFKSLINLERLILAQNQI 623
E K L L ++ NQ+
Sbjct: 930 --EGVKGCSRLGYLDVSWNQL 948
>SB_19622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/58 (34%), Positives = 34/58 (58%)
Frame = +3
Query: 444 NLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQN 617
+L+KLDLSRN+I I + ++ L+ L+L+ N I++ + +K + L L L N
Sbjct: 486 SLKKLDLSRNRIKSIPAQ-IEELSNLETLNLASNKITSGQEHTWK-MGQLRELSLRDN 541
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 375 TIVVSLNLSGNAISTLSREL-YLPNLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHI 551
T + +L L N IS + + L L++L L N+I ++ + L LD+S NHI
Sbjct: 222 TTLTTLYLRFNRISVVESGIGNLKLLERLSLRENKIKILPR-VIGQLVHLVTLDISHNHI 280
Query: 552 SNV 560
N+
Sbjct: 281 ENL 283
>SB_17109| Best HMM Match : LRR_1 (HMM E-Value=2.9e-10)
Length = 390
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +3
Query: 393 NLSGNAISTLSRELY-LPNLQKLDLSRNQITLIESDA-------FYNMTALQKLDLSQNH 548
+L + TL R L NL L+L+ N I + +A F +T L+KLDLS+N
Sbjct: 198 SLEQEGVVTLCRSLITFTNLTDLNLAYNLIKHRDLEAIDGLASTFSILTNLKKLDLSENQ 257
Query: 549 ISNVYKEMFKSL-INLERL 602
+ + ++ +SL +NL L
Sbjct: 258 LGSGVCQVLQSLKVNLTHL 276
>SB_31737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +3
Query: 393 NLSGNAISTLSRELYLPNLQK-LDLSRNQITLIESDAF 503
NLS NA+ ++S + + K +DLS N++T I +AF
Sbjct: 12 NLSRNALRSISSRAFSRHALKWIDLSHNKMTAINREAF 49
>SB_53214| Best HMM Match : LRR_1 (HMM E-Value=7.4e-06)
Length = 298
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 390 LNLSGNAISTLSRELYLP--NLQKLDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVY 563
L LS N + ++ +L +L+ + NQI + D F N++ KLD+ +N ++ V
Sbjct: 150 LYLSNNFLDSIPGGCFLDLKSLKHFFVGDNQIKKVADDVFQNVSNGFKLDIGRNKMNGVP 209
Query: 564 KEMFKSLINLERLI 605
+ + + L LI
Sbjct: 210 DAVKRVMDRLSYLI 223
>SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017)
Length = 1243
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 336 ITELKEIDLSKLWTIVVSLNLSGNAISTLSR-ELYLPNLQKLDLSRNQITLIESDAFYNM 512
+ E I KL+ I S L+ I+ L+R +L+ P+L LDLS N+I+ + A M
Sbjct: 1038 LKENTSIKKLKLFKITTSYVLADEFIAALARTQLHEPSLIDLDLSLNKISSKGAIAIAEM 1097
Query: 513 TALQKL 530
+ +L
Sbjct: 1098 LSKNQL 1103
>SB_41175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3259
Score = 28.7 bits (61), Expect = 4.2
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +3
Query: 345 LKEIDLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLSRNQITLIESDAFYNM-TAL 521
L ++D + + L L+ N IS +S L NLQ LDL N + I F + ++L
Sbjct: 768 LSDLDGISSLSSLAELYLAFNDISDVSPVSMLDNLQVLDLEGNLVDEIAQVEFLTLCSSL 827
Query: 522 QKLDLSQNHI 551
+ L+L N +
Sbjct: 828 KCLNLEGNPV 837
>SB_6989| Best HMM Match : LRR_1 (HMM E-Value=0.074)
Length = 180
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 456 LDLSRNQITLIESDAFYNMTALQKLDLSQNHISNVYKEMFKSLINLERLILAQNQI 623
++ SR T++ +D T L S+ ISN+ + F+ L NLE + L +N I
Sbjct: 111 IECSRANFTVLPNDIPVETTELY---FSRTQISNLVENAFQQLPNLEIMRLPENGI 163
>SB_49794| Best HMM Match : CBS (HMM E-Value=2.8)
Length = 120
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 315 CGGSPAPITELKEIDLSKLWTIVVSLNLSGNAISTLSRELYLPNLQKLDLS-RNQITLIE 491
C PAP ++ L K+ + LNLS ++TL R + +L++L L+ + L
Sbjct: 18 CQIDPAPFQLVERTSLLKVHKLFALLNLSHAYVTTLGRLSGVVSLKELRLAIEGEKYLDS 77
Query: 492 SDAFYNMTALQKLDLSQNHISNVYKE 569
+D L+ SQ ++ E
Sbjct: 78 ADVNNTKQGPANLEFSQRDAQDIMLE 103
>SB_3708| Best HMM Match : DUF374 (HMM E-Value=2.2)
Length = 498
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 181 LRFLLCRCYAQTGCSHTVPH 240
+R +L RCYA C HT H
Sbjct: 33 MRLILYRCYALNNCDHTHVH 52
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,071,118
Number of Sequences: 59808
Number of extensions: 329938
Number of successful extensions: 986
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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