Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30p06
         (427 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   2.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.9  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.0  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   5.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   5.0  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   5.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   6.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   6.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   8.7  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +2

Query: 119 FTALIVNIVGGAVLCMG 169
           + A++ +I+ GA+ C+G
Sbjct: 86  YPAIVADILSGAIACIG 102


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 283 HYIKVDCRRHDSTNSISLSKTDNCC 357
           H +K+  RR+  T ++ L +  N C
Sbjct: 300 HSLKIHLRRYGHTPNVVLDEEGNPC 324



 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +1

Query: 280 KHYIKVDCRRHDSTNSISLSKTDNCC 357
           KH+++   R H  +     +K D  C
Sbjct: 243 KHHLEYHLRNHAGSKPFQCNKCDYTC 268


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +1

Query: 280 KHYIKVDCRRHDSTNSISLSKTDNCC 357
           KH+++   R H  +     +K D  C
Sbjct: 1   KHHLEYHLRNHAGSKPFQCNKCDYTC 26


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 246 EAAMLPAIIPDAL 208
           EAA+L  +IPDAL
Sbjct: 56  EAAILRDVIPDAL 68


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 351 LLLVNIFWI*NVLNSEINM 407
           LLLV + W+ +    EINM
Sbjct: 354 LLLVELSWMNDEAQQEINM 372


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 246 EAAMLPAIIPDAL 208
           EAA+L  +IPDAL
Sbjct: 56  EAAILRDVIPDAL 68


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 355 SSYLFLTNLWSWCYHG 308
           SSYL   NL ++ +HG
Sbjct: 268 SSYLDFINLMAYDFHG 283


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 27  LLINKQIKFIKC*FVL 74
           L+INK++ FI+C FV+
Sbjct: 84  LVINKRLIFIEC-FVM 98


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 27  LLINKQIKFIKC*FVL 74
           L+INK++ FI+C FV+
Sbjct: 84  LVINKRLIFIEC-FVM 98


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 61  HLINFICLLINNFSIT 14
           H+ N+ CL  N+ S+T
Sbjct: 672 HVGNYTCLASNSASVT 687


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,546
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)