Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30p06
         (427 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.85 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   3.4  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   6.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 0.85
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -2

Query: 204 PSRGATI-GIKNPPMQRTAPPTMLTIRAVKNPMILK 100
           PSR A   GI +PP     PP+ L+   V  P +L+
Sbjct: 771 PSRSAFADGIGSPPPPPPPPPSSLSPGGVPRPTVLQ 806


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +1

Query: 106  DHGIFHCPNSQHRRR--SRSLHGRV 174
            +H +FHCP S   R    +  H RV
Sbjct: 949  EHVLFHCPRSDRIRNEMQQRCHSRV 973


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 377 NPEYVDEQQLSVFDKLMELVLSWRR 303
           NP Y+  Q     D+  +++  WR+
Sbjct: 251 NPTYLVHQHTQNLDETFDMMYQWRK 275


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 95  SNFSLDIQYKLTLDKLYLFIDQQFL 21
           +N  LDI+  L  ++L+LF+ +  L
Sbjct: 99  NNVDLDIEVSLLCEELFLFLRRSSL 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,056
Number of Sequences: 2352
Number of extensions: 10135
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)