Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30o24
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021326-1|AAX33474.1|  905|Drosophila melanogaster RE07805p pro...    29   3.3  
BT011336-1|AAR96128.1|  914|Drosophila melanogaster SD02170p pro...    29   3.3  
BT001607-1|AAN71362.1|  604|Drosophila melanogaster RE31467p pro...    29   3.3  
AE013599-3654|AAM68265.1|  904|Drosophila melanogaster CG5411-PB...    29   3.3  
AE013599-3653|AAM68264.1|  805|Drosophila melanogaster CG5411-PD...    29   3.3  
AE013599-3652|AAF47038.3|  905|Drosophila melanogaster CG5411-PE...    29   3.3  
AE013599-3651|AAM68263.1|  914|Drosophila melanogaster CG5411-PA...    29   3.3  

>BT021326-1|AAX33474.1|  905|Drosophila melanogaster RE07805p
           protein.
          Length = 905

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 424 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 455


>BT011336-1|AAR96128.1|  914|Drosophila melanogaster SD02170p
           protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 424 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 455


>BT001607-1|AAN71362.1|  604|Drosophila melanogaster RE31467p
           protein.
          Length = 604

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 414 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 445


>AE013599-3654|AAM68265.1|  904|Drosophila melanogaster CG5411-PB,
           isoform B protein.
          Length = 904

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 414 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 445


>AE013599-3653|AAM68264.1|  805|Drosophila melanogaster CG5411-PD,
           isoform D protein.
          Length = 805

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 315 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 346


>AE013599-3652|AAF47038.3|  905|Drosophila melanogaster CG5411-PE,
           isoform E protein.
          Length = 905

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 424 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 455


>AE013599-3651|AAM68263.1|  914|Drosophila melanogaster CG5411-PA,
           isoform A protein.
          Length = 914

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = -1

Query: 427 IDVLCCLPRPRVA-KGIVHNIVRYSFDISRIA 335
           +D +  LP+P+ A +G +H++ R SFD+  IA
Sbjct: 424 MDFIATLPQPKEAPRGSLHSVRRCSFDVRSIA 455


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,502,455
Number of Sequences: 53049
Number of extensions: 450771
Number of successful extensions: 1132
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)