Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30o21
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061304-1|AAL28852.1| 240|Drosophila melanogaster LD21667p pro... 162 4e-40
AF188892-1|AAG17061.1| 240|Drosophila melanogaster potential RN... 162 4e-40
AE014298-3008|AAF50915.1| 240|Drosophila melanogaster CG11738-P... 162 4e-40
AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p pro... 30 2.4
AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,... 30 2.4
AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,... 30 2.4
BT001259-1|AAN71015.1| 1500|Drosophila melanogaster AT02321p pro... 29 5.4
AE013599-1697|AAF58379.1| 1503|Drosophila melanogaster CG4744-PA... 28 9.5
>AY061304-1|AAL28852.1| 240|Drosophila melanogaster LD21667p
protein.
Length = 240
Score = 162 bits (393), Expect = 4e-40
Identities = 89/177 (50%), Positives = 107/177 (60%)
Frame = +3
Query: 117 METENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 296
ME ENI D F PAK+ K + D M+V+E T E
Sbjct: 1 MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57
Query: 297 XDPNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETK 476
+E +RKV+VP HRY+ LKE W+KIFTP+VEH+ LQ+RFN K R VE++VGPET
Sbjct: 58 RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113
Query: 477 DIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGR 647
DIANLQ+ ADFV+AF+ GFEV FVESFE+KDVKTL GDH SRAIGR
Sbjct: 114 DIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGR 170
>AF188892-1|AAG17061.1| 240|Drosophila melanogaster potential
RNA-binding protein protein.
Length = 240
Score = 162 bits (393), Expect = 4e-40
Identities = 89/177 (50%), Positives = 107/177 (60%)
Frame = +3
Query: 117 METENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 296
ME ENI D F PAK+ K + D M+V+E T E
Sbjct: 1 MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57
Query: 297 XDPNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETK 476
+E +RKV+VP HRY+ LKE W+KIFTP+VEH+ LQ+RFN K R VE++VGPET
Sbjct: 58 RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113
Query: 477 DIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGR 647
DIANLQ+ ADFV+AF+ GFEV FVESFE+KDVKTL GDH SRAIGR
Sbjct: 114 DIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGR 170
>AE014298-3008|AAF50915.1| 240|Drosophila melanogaster CG11738-PA
protein.
Length = 240
Score = 162 bits (393), Expect = 4e-40
Identities = 89/177 (50%), Positives = 107/177 (60%)
Frame = +3
Query: 117 METENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGEXXXXXXXXXXXXXXXX 296
ME ENI D F PAK+ K + D M+V+E T E
Sbjct: 1 MEAENIRADAFEPAKRATK-RGASGGGQQDVE--MQVDEATGIEGQVLGSSRASAPPKAK 57
Query: 297 XDPNESKVAMRKVAVPAHRYTPLKESWLKIFTPIVEHLLLQVRFNTKTRNVEIKVGPETK 476
+E +RKV+VP HRY+ LKE W+KIFTP+VEH+ LQ+RFN K R VE++VGPET
Sbjct: 58 RARSE----LRKVSVPPHRYSSLKEHWMKIFTPVVEHMKLQIRFNMKARQVELRVGPETP 113
Query: 477 DIANLQKAADFVKAFIYGFEVXXXXXXXXXXXXFVESFEVKDVKTLNGDHLSRAIGR 647
DIANLQ+ ADFV+AF+ GFEV FVESFE+KDVKTL GDH SRAIGR
Sbjct: 114 DIANLQRGADFVRAFLCGFEVDDALALLRLEDLFVESFEIKDVKTLRGDHQSRAIGR 170
>AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p
protein.
Length = 1058
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 269 SRLLWIAFPNCGLFNLHTISGVICSFALYIFKLHRL 162
SRLLW A N++ + GV+C A+Y F + L
Sbjct: 781 SRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINL 816
>AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,
isoform B protein.
Length = 1058
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 269 SRLLWIAFPNCGLFNLHTISGVICSFALYIFKLHRL 162
SRLLW A N++ + GV+C A+Y F + L
Sbjct: 781 SRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINL 816
>AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,
isoform A protein.
Length = 1058
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 269 SRLLWIAFPNCGLFNLHTISGVICSFALYIFKLHRL 162
SRLLW A N++ + GV+C A+Y F + L
Sbjct: 781 SRLLWFADLTFETENMYFLIGVLCGLAIYNFTIINL 816
>BT001259-1|AAN71015.1| 1500|Drosophila melanogaster AT02321p
protein.
Length = 1500
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +3
Query: 99 DEPSHKMETENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGE 248
+EP K E ENIS D A K L KA TGDG E+ T+ E
Sbjct: 473 EEPVLKSEDENIS--DHEMAMKIAVLDIKDDKALHSTGDGESKEKDTLEE 520
>AE013599-1697|AAF58379.1| 1503|Drosophila melanogaster CG4744-PA
protein.
Length = 1503
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 99 DEPSHKMETENISVDDFLPAKKTMKLKNIKRKATDDTGDGMEVEEPTIGE 248
+EP K E ENIS + + +K+ KA TGDG E+ T+ E
Sbjct: 473 EEPVLKSEDENISNREMAMKIAVLDIKD--DKALHSTGDGESKEKDTLEE 520
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,986,864
Number of Sequences: 53049
Number of extensions: 478766
Number of successful extensions: 1109
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -