Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30o02
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory su... 163 3e-39
UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome... 153 5e-36
UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome... 153 5e-36
UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle, non-atp... 149 8e-35
UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome... 147 3e-34
UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces cere... 144 2e-33
UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1; ... 127 3e-28
UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n... 126 4e-28
UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;... 122 8e-27
UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;... 118 1e-25
UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.... 116 5e-25
UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;... 112 7e-24
UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2; Ent... 111 1e-23
UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1; Filobasid... 108 1e-22
UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albica... 107 2e-22
UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, wh... 97 4e-19
UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subun... 95 1e-18
UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2; ... 95 1e-18
UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family prot... 80 4e-14
UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit, puta... 68 2e-10
UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=... 56 1e-06
UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit, puta... 46 9e-04
UniRef50_A2YDT5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q30U13 Cluster: Putative uncharacterized protein; n=1; ... 38 0.30
UniRef50_A4RJ57 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q5WIN4 Cluster: ABC transporter substrate-binding prote... 34 3.7
UniRef50_UPI00015BC64B Cluster: UPI00015BC64B related cluster; n... 33 4.9
UniRef50_UPI00006CCFE3 Cluster: hypothetical protein TTHERM_0018... 33 4.9
UniRef50_A0L3J4 Cluster: Putative uncharacterized protein precur... 33 4.9
UniRef50_A2BXJ6 Cluster: Putative GDP-D-mannose dehydratase; n=1... 33 6.5
UniRef50_UPI000023E7F1 Cluster: hypothetical protein FG06481.1; ... 33 8.6
UniRef50_Q4RS43 Cluster: Chromosome 7 SCAF15001, whole genome sh... 33 8.6
UniRef50_Q69AB9 Cluster: CC-NBS-LRR; n=24; Asteraceae|Rep: CC-NB... 33 8.6
UniRef50_Q59P54 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_Q13200 Cluster: 26S proteasome non-ATPase regulatory
subunit 2; n=48; Euteleostomi|Rep: 26S proteasome
non-ATPase regulatory subunit 2 - Homo sapiens (Human)
Length = 908
Score = 163 bits (397), Expect = 3e-39
Identities = 83/160 (51%), Positives = 113/160 (70%), Gaps = 6/160 (3%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEEDK+LQ+EL MLV++L + LY PAL+ L IR+STTSMTSVPKPLKFLR HY
Sbjct: 46 SEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGK 105
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
LK++YE + + K+F AD+ISVLAM +SG +RECLKY L+G+ + WGHEYV
Sbjct: 106 LKEIYENMAPGENKRFAADIISVLAMTMSG------ERECLKYRLVGSQEELASWGHEYV 159
Query: 584 RQLEGEIAEEW----NIENM--DSLLPLVRDVITFDMKHS 685
R L GE+A+EW + E + + LL LV++++ ++M H+
Sbjct: 160 RHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHN 199
>UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Apis mellifera|Rep: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2 - Apis
mellifera
Length = 871
Score = 153 bits (370), Expect = 5e-36
Identities = 82/164 (50%), Positives = 107/164 (65%), Gaps = 7/164 (4%)
Frame = +2
Query: 215 SATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREH 394
S EED RLQEEL L D LLG + D AL L L++TSTTSMTSVPKPLK+L++
Sbjct: 10 SEMDEEDTRLQEELFQLADVLLGKDEDAMLIALSQLRLLMQTSTTSMTSVPKPLKYLKKT 69
Query: 395 YPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 574
Y +K YE I ++K + A+V+SVL+M +G L +ECL+YC+ G ++ G+WGH
Sbjct: 70 YNDMKNAYENIQNDKVRHQFAEVLSVLSM--AGAL--PGSKECLRYCIQGEVTKPGEWGH 125
Query: 575 EYVRQLEGEIAEEW-----NIEN--MDSLLPLVRDVITFDMKHS 685
EY+RQLEGEI +EW EN L PLV+ +I FDMKH+
Sbjct: 126 EYIRQLEGEIVDEWTNSPVKEENRIRTELAPLVKGIIKFDMKHN 169
>UniRef50_UPI0000D56C55 Cluster: PREDICTED: similar to proteasome
(prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
proteasome (prosome, macropain) 26S subunit, non-ATPase,
2 - Tribolium castaneum
Length = 870
Score = 153 bits (370), Expect = 5e-36
Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
S++DK LQ EL LVD++ G+E L +L ML LIRTST+SMTSVPKPLK+L Y A
Sbjct: 16 SDDDKELQVELKGLVDRITGDESKLVNVSLDMLKYLIRTSTSSMTSVPKPLKYLAPFYGA 75
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMG-VSGTLEVAEKRECLKYCLLGTLSNVGDWGHEY 580
L+ + + D KK +DV+SVL+MG + G+ V +CLKYCL GT+ N+GDWGHEY
Sbjct: 76 LRNKCDSMKDPLLKKNLSDVVSVLSMGAIDGS--VKRDFDCLKYCLQGTMENIGDWGHEY 133
Query: 581 VRQLEGEIAEEWNI--ENMDSLLPLVRDVITFDMKH 682
+RQLE EI ++W + N +L PLV+ ++ F+ H
Sbjct: 134 IRQLEIEIVKQWVMCENNYKTLSPLVKQIMRFNCSH 169
>UniRef50_Q9GZH5 Cluster: Proteasome regulatory particle,
non-atpase-like protein 1; n=2; Caenorhabditis|Rep:
Proteasome regulatory particle, non-atpase-like protein
1 - Caenorhabditis elegans
Length = 981
Score = 149 bits (360), Expect = 8e-35
Identities = 74/159 (46%), Positives = 103/159 (64%), Gaps = 5/159 (3%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED++L+E+LN+LV +L + LY P+L+ + LIR STTSMTSVPKPLKF+R HY
Sbjct: 34 SEEDQKLEEDLNLLVQRLSEPDTTLYKPSLETMRTLIRASTTSMTSVPKPLKFMRPHYNK 93
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
+K+++ I KK CAD+ISVLAM E+ + + Y +LG+ +GDWGHEYV
Sbjct: 94 MKEIFTSIVAPDVKKLCADIISVLAMTSD------ERTDTINYRILGSHEPIGDWGHEYV 147
Query: 584 RQLEGEIAEEWNIENMD-----SLLPLVRDVITFDMKHS 685
R L E++EEW E LL L +D+++ MKH+
Sbjct: 148 RHLAMEMSEEWKKEGTSDARKAELLKLTQDIVSHHMKHN 186
>UniRef50_UPI00015B44CD Cluster: PREDICTED: similar to proteasome
26S non-ATPase subunit 2; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to proteasome 26S non-ATPase subunit
2 - Nasonia vitripennis
Length = 897
Score = 147 bits (356), Expect = 3e-34
Identities = 80/160 (50%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
S+EDK+LQ++L LV+ ++ N AL L L+R+STTSMT+VPKPLK+L++ YP
Sbjct: 19 SDEDKKLQDDLRQLVEDVVENRS--VSSALSNLRKLMRSSTTSMTAVPKPLKYLKDSYPV 76
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
L + ++K TD K ADVISVLA+ S KR+CL YCL GTL+N GDWGHEYV
Sbjct: 77 LIRAHKKKTDPKEAARLADVISVLALAAS----APGKRDCLDYCLRGTLANPGDWGHEYV 132
Query: 584 RQLEGEIAEEW-------NIENMDSLLPLVRDVITFDMKH 682
R+LE EI EEW + LLPLV+ ++ FD KH
Sbjct: 133 RRLEMEIVEEWLGMPYEQEKTITERLLPLVKKILIFDAKH 172
>UniRef50_Q6CFX0 Cluster: Similar to sp|P38764 Saccharomyces
cerevisiae 26S proteasome regulatory subunit RPN1; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P38764
Saccharomyces cerevisiae 26S proteasome regulatory
subunit RPN1 - Yarrowia lipolytica (Candida lipolytica)
Length = 979
Score = 144 bits (348), Expect = 2e-33
Identities = 71/138 (51%), Positives = 97/138 (70%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED++L+ EL MLV++L + LY P+L+ L N IRTST+SMT+VPKPLKFLR HYP
Sbjct: 40 SEEDEKLKSELEMLVERLTEKDESLYEPSLEALKNFIRTSTSSMTAVPKPLKFLRPHYPQ 99
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
L ++Y+ TD K K+ ADV+SVLAM SG KR+ LK+ L T ++G WGHEYV
Sbjct: 100 LAELYDTWTDAKHKQQLADVLSVLAMTYSGD----GKRDALKFRLKSTTDDLGSWGHEYV 155
Query: 584 RQLEGEIAEEWNIENMDS 637
R L EI +E+ ++ +++
Sbjct: 156 RHLALEIGQEYQLQQVET 173
>UniRef50_Q4PAF8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 946
Score = 127 bits (306), Expect = 3e-28
Identities = 74/163 (45%), Positives = 98/163 (60%), Gaps = 9/163 (5%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SE+D +L+ EL MLV++L ++ LY PAL+ L LIRTST+SMTSVPKPLKFLR HYP
Sbjct: 58 SEDDLQLKNELEMLVERLKEDDSSLYRPALESLRTLIRTSTSSMTSVPKPLKFLRPHYPE 117
Query: 404 LKQVYEKITDEKT-KKFCADVISVLAMGVS--GTLEVAEKR-ECLKYCLLGTLSNVGDWG 571
LK +YE + K A+++SVLAM S G E R + + G + G WG
Sbjct: 118 LKTLYESWSQASADKSLFAEILSVLAMTYSDNGQRETLHFRLKANQVASDGKSEDPGLWG 177
Query: 572 HEYVRQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKHS 685
HEY+R L E+ EE+N +N D LL L V+ F + H+
Sbjct: 178 HEYMRHLAAELGEEYNARSQDEKNTDELLELALQVVPFSLTHN 220
>UniRef50_Q54BC6 Cluster: 26S proteasome regulatory subunit S2; n=1;
Dictyostelium discoideum AX4|Rep: 26S proteasome
regulatory subunit S2 - Dictyostelium discoideum AX4
Length = 893
Score = 126 bits (305), Expect = 4e-28
Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 5/168 (2%)
Frame = +2
Query: 197 KKMSASSATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPL 376
KK S ED++L+ +L +LV++ + ++ AL+ L IR+ST+SMTSVPKPL
Sbjct: 47 KKDKKEETLSPEDEKLKNDLELLVERSRDEKEEIALAALEALKTEIRSSTSSMTSVPKPL 106
Query: 377 KFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSN 556
KFLR HY L +Y+ + K K AD++SVLAM +G ++R+ LKY LLG+
Sbjct: 107 KFLRNHYSTLVDIYKNSKEGKAKTSLADILSVLAM-ANGN----DERDTLKYKLLGSGEA 161
Query: 557 VGDWGHEYVRQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKHS 685
+ WGHEYV+ L EI E++I ++++ LL LV +++ F M H+
Sbjct: 162 IASWGHEYVKHLATEIGVEYDIKKEENQSVEDLLKLVDEIVPFQMTHN 209
>UniRef50_Q6FPV6 Cluster: 26S proteasome regulatory subunit RPN1;
n=2; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 983
Score = 122 bits (294), Expect = 8e-27
Identities = 65/141 (46%), Positives = 87/141 (61%)
Frame = +2
Query: 197 KKMSASSATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPL 376
KK + SEED++L+ +L MLV LL ++ LY L L I+ ST+SMT+VPKPL
Sbjct: 30 KKANEEEELSEEDQKLKGDLEMLVQTLLEDDSKLYETTLTQLKEFIKNSTSSMTAVPKPL 89
Query: 377 KFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSN 556
KFLR YP L + Y+K +D+ K AD++SVLAM S T + + L++ LL SN
Sbjct: 90 KFLRPFYPDLCKAYDKWSDKDQKSSLADMLSVLAMTYSDT----HQHDSLRFRLLSDTSN 145
Query: 557 VGDWGHEYVRQLEGEIAEEWN 619
+ WGHEYVR L EI E +N
Sbjct: 146 IASWGHEYVRHLALEIGEVYN 166
>UniRef50_P38764 Cluster: 26S proteasome regulatory subunit RPN1;
n=8; Saccharomycetales|Rep: 26S proteasome regulatory
subunit RPN1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 993
Score = 118 bits (284), Expect = 1e-25
Identities = 63/141 (44%), Positives = 85/141 (60%)
Frame = +2
Query: 197 KKMSASSATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPL 376
KK SEED +L+ +L +LV++L ++ LY +L L I+ ST+SMT+VPKPL
Sbjct: 30 KKKEEEEQLSEEDAKLKTDLELLVERLKEDDSSLYEASLNALKESIKNSTSSMTAVPKPL 89
Query: 377 KFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSN 556
KFLR YP L +Y+K TD K ADV+S+LAM T K + L+Y LL +S+
Sbjct: 90 KFLRPTYPDLCSIYDKWTDPNLKSSLADVLSILAM----TYSENGKHDSLRYRLLSDVSD 145
Query: 557 VGDWGHEYVRQLEGEIAEEWN 619
WGHEY+R L EI E +N
Sbjct: 146 FEGWGHEYIRHLALEIGEVYN 166
>UniRef50_O49456 Cluster: Putative uncharacterized protein
F20O9.150; n=1; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F20O9.150 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1103
Score = 116 bits (279), Expect = 5e-25
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 27/181 (14%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED +L++ L + V+++ +L AL+ + IR ST+SMTSVPKPLKFLR HY
Sbjct: 40 SEEDLQLKQNLELYVERVQDPNPELQKIALESMRKEIRDSTSSMTSVPKPLKFLRPHYGV 99
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLE-------VAE---------------KR 517
LK+ + K+ + KK AD++SVLA+ +S E + E +
Sbjct: 100 LKEFHAKMAESDLKKMLADILSVLALTMSAEGERICVLWFLVEFDLSYLLLILCYAILFQ 159
Query: 518 ECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKH 682
E L Y L G+ S++G WGHEYVR L GEIA+E+ I +++ L+ LV+ +++F MKH
Sbjct: 160 ESLNYRLNGSESDIGSWGHEYVRNLAGEIAKEYTIRQGEESSIEDLMDLVQQIVSFHMKH 219
Query: 683 S 685
+
Sbjct: 220 N 220
>UniRef50_P87048 Cluster: 26S proteasome regulatory subunit rpn1;
n=23; cellular organisms|Rep: 26S proteasome regulatory
subunit rpn1 - Schizosaccharomyces pombe (Fission yeast)
Length = 891
Score = 112 bits (270), Expect = 7e-24
Identities = 65/159 (40%), Positives = 88/159 (55%), Gaps = 5/159 (3%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED +L+ +L +LV + +L +L L +IRTST+SMT+VPKPLKFLR HY
Sbjct: 47 SEEDLQLKNDLELLVQAVQDATPELVGSSLTQLKEIIRTSTSSMTAVPKPLKFLRPHYFT 106
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
L ++Y+ K AD++SVL M S T K E LKY L G ++ WGHEYV
Sbjct: 107 LVKIYDSWPQSPQKTQLADILSVLGMSYSNT----SKHESLKYRLQGVTTDPSLWGHEYV 162
Query: 584 RQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHS 685
R L EI EE+ D L+ L ++ F + H+
Sbjct: 163 RHLASEIEEEFASRQEEEAPTDDLMELALTIVPFFLTHN 201
>UniRef50_O61123 Cluster: 19S cap proteasome S2 subunit; n=2;
Entamoeba histolytica|Rep: 19S cap proteasome S2 subunit
- Entamoeba histolytica
Length = 843
Score = 111 bits (268), Expect = 1e-23
Identities = 57/153 (37%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Frame = +2
Query: 230 EDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIR-TSTTSMTSVPKPLKFLREHYPAL 406
ED +L+EE+ +LV ++ +++ A+++L +R +T+S T++PK KF+R + L
Sbjct: 14 EDDQLKEEIELLVKRIQDPNIEISTSAIELLRKTLRGDNTSSSTTLPKTTKFIRPYLDQL 73
Query: 407 KQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVR 586
KQ + ++T+ + ++ ADV+SVL M +G EK E LKY LLG L ++G WGHEY R
Sbjct: 74 KQFHSQLTNGELRQSLADVLSVLVM-TNG-----EKGESLKYKLLGHLDDLGQWGHEYTR 127
Query: 587 QLEGEIAEEWNIENMDSLLPLVRDVITFDMKHS 685
L GE+ + W + D L+P+ + +I F ++H+
Sbjct: 128 NLTGEVVDVWQ-QQKDLLIPIAQKLIEFHIEHN 159
>UniRef50_Q5KAX5 Cluster: Endopeptidase, putative; n=1;
Filobasidiella neoformans|Rep: Endopeptidase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1003
Score = 108 bits (259), Expect = 1e-22
Identities = 64/134 (47%), Positives = 85/134 (63%), Gaps = 3/134 (2%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED +L+ EL MLV +L + LY PAL+ L LIRTST+SMTSVPKPLKFLR Y
Sbjct: 47 SEEDLQLKAELEMLVQRLREPDSGLYQPALESLRTLIRTSTSSMTSVPKPLKFLRPFYEE 106
Query: 404 LKQVYEKITDE--KTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLL-GTLSNVGDWGH 574
+ ++ + +++ + + A ++SVLAM S T KRE L Y +L G+ G WGH
Sbjct: 107 MGKIRDGWSEDLKEQRSLLASILSVLAMTYSDT----GKRETLYYRVLSGSEEAPGLWGH 162
Query: 575 EYVRQLEGEIAEEW 616
EYVR L E+ EE+
Sbjct: 163 EYVRHLAAELGEEY 176
>UniRef50_Q6BP56 Cluster: Similar to CA1252|CaRPN1 Candida albicans
CaRPN1 26S proteasome regulatory subunit; n=2;
Saccharomycetaceae|Rep: Similar to CA1252|CaRPN1 Candida
albicans CaRPN1 26S proteasome regulatory subunit -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 967
Score = 107 bits (258), Expect = 2e-22
Identities = 69/159 (43%), Positives = 91/159 (57%), Gaps = 7/159 (4%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLL--GNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 397
SEED+ L++EL MLV++L +V+LY L L I+ STTSMT+VPKPLKFLR HY
Sbjct: 36 SEEDQHLKDELEMLVERLNEPSQKVELYNEYLNSLKAFIKDSTTSMTAVPKPLKFLRPHY 95
Query: 398 PALKQVYEKIT-----DEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVG 562
P L +Y+K D AD++SVLAM T K + LKY LL + +
Sbjct: 96 PLLTDLYDKWCGDYKGDSDLVIKLADILSVLAM----TYSDDGKNDSLKYRLLSSSDTIV 151
Query: 563 DWGHEYVRQLEGEIAEEWNIENMDSLLPLVRDVITFDMK 679
DWGHEY+R L EI + EN+ S L+ +I M+
Sbjct: 152 DWGHEYMRHLALEIGISYQ-ENLGSDEDLINRLIKLAMQ 189
>UniRef50_A0EBG0 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_88, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 887
Score = 97.1 bits (231), Expect = 4e-19
Identities = 59/163 (36%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Frame = +2
Query: 212 SSATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLRE 391
+S SE+D L+ L +++ N + +L+ L +R++TTSMTSVPKP KFL+E
Sbjct: 30 ASFQSEQDLELKNRLEQYAQEIIQNNTE----SLEKLKTEVRSATTSMTSVPKPFKFLKE 85
Query: 392 HYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWG 571
Y L + Y ++ + KK AD +SVLAM G R+ L Y GTL WG
Sbjct: 86 SYGKLVEFYNELEASRFKKQLADFLSVLAMTYGG------DRDSLLYLQEGTLEEFKFWG 139
Query: 572 HEYVRQLEGEIAEEWNI-----ENMDSLLPLVRDVITFDMKHS 685
HEY+ L I E+ I + D LL LV +++ + M H+
Sbjct: 140 HEYLSHLAANIGSEFQIRLQKVDGADDLLFLVDEIVPYFMDHN 182
>UniRef50_Q8WRU8 Cluster: Proteasome regulatory non-ATP-ase subunit
1; n=9; Trypanosomatidae|Rep: Proteasome regulatory
non-ATP-ase subunit 1 - Trypanosoma brucei
Length = 911
Score = 95.5 bits (227), Expect = 1e-18
Identities = 57/160 (35%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTT-SMTSVPKPLKFLREHYP 400
SEED+R++ ++ +LV ++ + +L A+ L +L+RT T+ S+ SVPKPLK++R Y
Sbjct: 35 SEEDERIKGQVELLVTRVGDSNTELAAVAVDQLIDLLRTHTSGSVASVPKPLKYVRSMYG 94
Query: 401 ALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAE-KRECLKYCLLGTLSNVGDWGHE 577
L++V ++ T+ K DV+S +AM T+E + +R L++ LLGT ++ WGHE
Sbjct: 95 QLERVQKETTNPKLAVRLHDVLSFVAM----TIEFPDGQRPALEHKLLGTQDDLAHWGHE 150
Query: 578 YVRQLEGEIAEEW--NIENMDSLLPL---VRDVITFDMKH 682
Y+R L G I+ EW + +S++ L V+ ++++ +KH
Sbjct: 151 YLRFLAGCISTEWKERVSKGESVVHLDGFVQQIVSYMVKH 190
>UniRef50_Q5CPW2 Cluster: Proteasome regulatory subunit S2; n=2;
Cryptosporidium|Rep: Proteasome regulatory subunit S2 -
Cryptosporidium parvum Iowa II
Length = 1045
Score = 95.5 bits (227), Expect = 1e-18
Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 5/150 (3%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLG--NEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY 397
+EEDK L+EE++ LV+K++ +E ++ +L+ LS+LI+TST+ MTSVPK LKFL HY
Sbjct: 42 TEEDKVLKEEIDELVEKVVSGKSEFEVSKSSLESLSSLIKTSTSGMTSVPKALKFLGIHY 101
Query: 398 PALKQVYEKITDEK--TKKFCADVISVLAMGVSGTLEVAEKRECLKYCLL-GTLSNVGDW 568
LK+ + K + ++ISVL S TL +++ LKY LL G + DW
Sbjct: 102 ETLKEFCDSQVSNKGQLSELSCEIISVL----STTLGDMKEKRALKYRLLSGNKKGILDW 157
Query: 569 GHEYVRQLEGEIAEEWNIENMDSLLPLVRD 658
G EYVR + GEI E++ + L V D
Sbjct: 158 GQEYVRNIVGEITLEYSERQTNQDLSGVSD 187
>UniRef50_A2EPF2 Cluster: Proteasome/cyclosome repeat family
protein; n=2; Trichomonas vaginalis G3|Rep:
Proteasome/cyclosome repeat family protein - Trichomonas
vaginalis G3
Length = 850
Score = 80.2 bits (189), Expect = 4e-14
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Frame = +2
Query: 203 MSASSATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKF 382
M+ D+ L E L V+K ++ A+ +L ++ ST+SMTSVPKP+K
Sbjct: 1 MAEDQLQQTPDEILIETLRTNVEKACNGDLQTRLAAVAVLVEELKKSTSSMTSVPKPMKH 60
Query: 383 LREHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVG 562
L + L + Y T+E+ +K AD++S+L++ + V K + L Y L + N+G
Sbjct: 61 LLPYLEELTRAYNTYTNEEFRKKIADLLSLLSI-----INVDTKYDVLLYRLECPVENIG 115
Query: 563 DWGHEYVRQLE-GEIAEEWNIENMDS---LLPLVRDVITFDMKHS 685
WGHEYVR L I N++++ S + PLV + + M H+
Sbjct: 116 FWGHEYVRCLTLNLIKASKNLQDLPSGIDINPLVDQISKYYMTHN 160
>UniRef50_A5KBK8 Cluster: 26S proteasome regulatory subunit,
putative; n=5; Plasmodium|Rep: 26S proteasome regulatory
subunit, putative - Plasmodium vivax
Length = 1039
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/139 (25%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
+EE+K+ +EEL +L+ +L + ++ ++ ML+ I ++ +TS LK L+ HY
Sbjct: 38 NEEEKKKKEELELLITRLRDEDPEVVNLSITMLNKEIIDTSGILTSSLLALKVLKTHYST 97
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
L +++E++ E+ K+ +++IS L + + ++ +KY ++G +++ ++GHEY+
Sbjct: 98 LLEIHEEMKFEECKRKMSNMISAL------STTIGDENNIVKYVIMGNKNDLVNYGHEYI 151
Query: 584 RQLEGEIAEEW-NIENMDS 637
+ L ++ E+ N++ +S
Sbjct: 152 KNLISKLLVEFKNVKEEES 170
>UniRef50_Q8SS65 Cluster: 26S PROTEASOME REGULATORY SUBUNIT 4; n=1;
Encephalitozoon cuniculi|Rep: 26S PROTEASOME REGULATORY
SUBUNIT 4 - Encephalitozoon cuniculi
Length = 795
Score = 55.6 bits (128), Expect = 1e-06
Identities = 41/149 (27%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
Frame = +2
Query: 251 ELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKIT 430
EL ++V+++ ++D+ AL ML ++ ++S + ++L ++ L+ V +++
Sbjct: 5 ELKIIVERIQDPDIDIQNNALNMLFDVTKSSHSKSIDTIN-FQYLADNLDVLEDVCKRLE 63
Query: 431 DEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAE 610
K + C D+IS + + V ++R+ L Y + G + ++ +WGH YV++L G IA+
Sbjct: 64 GNKKRWLC-DIISAICV-------VDDERKLLAYRVEGNIIDLKEWGHLYVKKLIGCIAD 115
Query: 611 EWNIENMDSLLPLVRDV----ITFDMKHS 685
N MD RDV I F KH+
Sbjct: 116 VKN-NKMDFPFAKTRDVGRECIDFLFKHN 143
>UniRef50_A7AS27 Cluster: Proteasome 26S regulatory subunit,
putative; n=1; Babesia bovis|Rep: Proteasome 26S
regulatory subunit, putative - Babesia bovis
Length = 1008
Score = 46.0 bits (104), Expect = 9e-04
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 200 KMSASSATSEEDKRLQEELNMLVDKLLGNEV--DLYFPALQMLSNLIRTSTTSMTSVPKP 373
K + + D +EEL++LV +LL +E+ D+ P L LS S+TSVPK
Sbjct: 2 KTKYKDSLNPADAAYKEELDLLVKELLASELNDDIARPLLLQLSIHATKENDSITSVPKS 61
Query: 374 LKFLREHYPALKQVYEK 424
L+FL +H Q+Y++
Sbjct: 62 LQFLIQHRDNFHQIYDE 78
>UniRef50_A2YDT5 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 91
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 353 MTSVPKPLKFLREHYPALKQVYEKITDEK-TKKFCADVISVLAMGVSGTLEVAEKRECLK 529
MTSVPKPLK L+ HY LK +E + + +K F SVLA S EK E ++
Sbjct: 1 MTSVPKPLKLLQPHYGTLKSYHETMPESSDSKVFLLLGKSVLAFQFSNVSNTPEKHEYVQ 60
Query: 530 -YCLLG 544
+ LLG
Sbjct: 61 VFVLLG 66
>UniRef50_Q30U13 Cluster: Putative uncharacterized protein; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: Putative
uncharacterized protein - Thiomicrospira denitrificans
(strain ATCC 33889 / DSM 1351)
Length = 626
Score = 37.5 bits (83), Expect = 0.30
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 215 SATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQML-SNLIRTSTTSMTSVPKPLKFLRE 391
SA E +++L+++ KL E+ L Q L S L + TSM S+ LK +E
Sbjct: 250 SAQQENNEKLKKDFEEQSKKL---ELKLNEIMQQNLDSKLKKFDETSMKSLDGLLKPFKE 306
Query: 392 HYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWG 571
+ K+ E + TKKF A++ + + ++++ E L L G G WG
Sbjct: 307 NLDTFKKKVEDSQENSTKKF-AELSKEIEQVTKAGMNISKEAESLTKALKGKKQMQGSWG 365
>UniRef50_A4RJ57 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 805
Score = 35.1 bits (77), Expect = 1.6
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -3
Query: 675 MSNVITSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHSLFS-ATS 499
+S+V TS S N +SMF P++ +T + P+SP F+N R+ HS + S
Sbjct: 429 ISSVPTSPRSNNRDSMFGRSMLEGSCPTSPVTSTDPRSPGFENFYRQGPSDHSAYHFQQS 488
Query: 498 RVPL 487
+PL
Sbjct: 489 HLPL 492
>UniRef50_Q5WIN4 Cluster: ABC transporter substrate-binding protein;
n=1; Bacillus clausii KSM-K16|Rep: ABC transporter
substrate-binding protein - Bacillus clausii (strain
KSM-K16)
Length = 328
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +2
Query: 254 LNMLVDKLLGNEVDLYF----PALQMLSNLIRTSTTSMTSVPKPL 376
L + DKL+GNEVDL F PA Q++++ I TSV P+
Sbjct: 80 LQTIADKLIGNEVDLVFANATPAAQIMASSITEVPILFTSVTDPV 124
>UniRef50_UPI00015BC64B Cluster: UPI00015BC64B related cluster; n=1;
unknown|Rep: UPI00015BC64B UniRef100 entry - unknown
Length = 196
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 227 EEDKRLQEELNMLVDKL--LGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYP 400
+E++ L +E L++KL L E ++ L L+R S + S+ + L+ L+EHY
Sbjct: 13 QEEQELTKE--QLIEKLSYLEKEYEVQKERCSKLEALVRASNEKLISLNRELEQLKEHYR 70
Query: 401 ALKQVYEKITDEKTKKFCADVI 466
++ +K E K DVI
Sbjct: 71 KEREQLKKYAYEGIVKDMLDVI 92
>UniRef50_UPI00006CCFE3 Cluster: hypothetical protein
TTHERM_00188940; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00188940 - Tetrahymena
thermophila SB210
Length = 950
Score = 33.5 bits (73), Expect = 4.9
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 212 SSATSEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTS-----TTSMTSVPKPL 376
+S S +DKR Q++ + L +++ LY ALQ L+ S T+S T +PKP
Sbjct: 353 NSDQSIQDKRTQQQSQ--IQSQLQSQI-LYEQALQQKLKLLPQSKENKNTSSFTQIPKPF 409
Query: 377 KFLREHYPALKQVYEK 424
+EH PA QV K
Sbjct: 410 NKFQEH-PAYNQVQLK 424
>UniRef50_A0L3J4 Cluster: Putative uncharacterized protein
precursor; n=1; Magnetococcus sp. MC-1|Rep: Putative
uncharacterized protein precursor - Magnetococcus sp.
(strain MC-1)
Length = 201
Score = 33.5 bits (73), Expect = 4.9
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = +2
Query: 254 LNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHY---PALKQVYEK 424
L M +LL EV A +L +R + ++ + KP++ +E Y + Y +
Sbjct: 68 LEMRYTELL-KEVTTKRAAFTLLEEELRAADLTLKDMEKPMREAKEQYRKAQLMSLEYPE 126
Query: 425 ITDEKTKKFCADVISVLAMGVSGTLE---VAEKRECLKYCLLGTLSNVGDWGHEYVRQLE 595
++ EK +K DV +++ G L+ V + R L Y L + + QL
Sbjct: 127 VSTEKERKAYYDVQKLVSQQTKGQLQGLAVLKNRLTLAYESLESAEQALERTRHEAEQLR 186
Query: 596 GEIAE 610
++AE
Sbjct: 187 SQLAE 191
>UniRef50_A2BXJ6 Cluster: Putative GDP-D-mannose dehydratase; n=1;
Prochlorococcus marinus str. MIT 9515|Rep: Putative
GDP-D-mannose dehydratase - Prochlorococcus marinus
(strain MIT 9515)
Length = 322
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 470 VLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEY 580
V A V G L++ K+E K+ LG L + DWGH Y
Sbjct: 191 VTAKVVKGALDIKYKKE--KFLELGNLDSYRDWGHSY 225
>UniRef50_UPI000023E7F1 Cluster: hypothetical protein FG06481.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06481.1 - Gibberella zeae PH-1
Length = 621
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 449 FCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLS-NVG-DWGHEYVRQLEGEIAEEWNI 622
F A +I +L + SG + E CL C++ NV +W + +R ++ +A EW I
Sbjct: 498 FTASIIHLLHIKSSGDIGRTEAMRCLSICIVSLYEMNVSWNWANRSIRAVQ-SLAAEWEI 556
Query: 623 E 625
+
Sbjct: 557 D 557
>UniRef50_Q4RS43 Cluster: Chromosome 7 SCAF15001, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 7
SCAF15001, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1578
Score = 32.7 bits (71), Expect = 8.6
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = -3
Query: 660 TSRTSGNNESMFSIFHSS-AISPSNCLT--YSCPQSPTFDNVPRRQYFKHSLFSATSRVP 490
T R S + S S HSS +SP S Q P D++ R Y++++L S+ +P
Sbjct: 1090 TKRPSDDTVSTVSSLHSSPTVSPQGSPRKGLSETQEPPKDSLLR--YYQNNLLSS---LP 1144
Query: 489 LTPIAKTEITSAQNFFVFSSVIFSYTCFNAG*CSLRNFRGLG 364
+ IAK++ ++ N SS + S AG SLR++ G+G
Sbjct: 1145 VGGIAKSQNSNQLNLSGSSSSLTSDASTKAGTVSLRSY-GIG 1185
>UniRef50_Q69AB9 Cluster: CC-NBS-LRR; n=24; Asteraceae|Rep:
CC-NBS-LRR - Helianthus annuus (Common sunflower)
Length = 1302
Score = 32.7 bits (71), Expect = 8.6
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 536 LLGTLSNVGDWGHEYVRQLEGEIAEEWNIENMDSLLPLVR 655
LLGT +NV DW E V L EI WN+EN D ++P +R
Sbjct: 379 LLGTRTNVEDW--EDV--LNSEI---WNLENSDKIVPALR 411
>UniRef50_Q59P54 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 142
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -3
Query: 672 SNVITSRTSGNNESMFSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHSLFSATSRV 493
S+V+TS TS S +S + SP PTF V RR +FK F+A++
Sbjct: 80 SSVLTSTTS----STYSFANLQVSSPRTFTAVPSANKPTFSKVTRRLFFK-DWFNASASY 134
Query: 492 PLTPIAKT 469
TP+ T
Sbjct: 135 VSTPMILT 142
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,568,081
Number of Sequences: 1657284
Number of extensions: 12572844
Number of successful extensions: 36774
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36715
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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