Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30o02
(686 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1276 - 28907726-28907842,28908012-28908062,28908146-289082... 130 8e-31
02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,256... 129 2e-30
09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,956... 110 9e-25
07_01_0071 - 522920-523063,524125-524212,524289-524677 31 0.65
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483... 30 1.5
07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146 30 1.5
06_03_1248 + 28685911-28687719 29 2.6
12_02_0359 + 17956816-17956915,17957255-17957347,17957583-179578... 29 3.5
03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906... 29 4.6
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 29 4.6
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 28 6.0
08_01_0680 - 5958066-5960253,5960707-5961503 28 6.0
02_02_0592 - 11934238-11934249,11934755-11934835,11935166-119353... 28 6.0
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 28 8.0
08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195 28 8.0
06_03_0492 - 21386587-21386700,21387471-21387599,21387715-213877... 28 8.0
03_01_0296 + 2284385-2285629,2287632-2288594 28 8.0
01_06_1703 + 39301075-39301829,39302735-39303560 28 8.0
>06_03_1276 -
28907726-28907842,28908012-28908062,28908146-28908254,
28908345-28908430,28908537-28908650,28908731-28908790,
28909088-28909303,28909401-28909514,28910632-28910853,
28910946-28911050,28911136-28911276,28911368-28911472,
28911538-28911645,28911753-28911911,28912060-28912140,
28912219-28912330,28912433-28912515,28912631-28912669,
28913061-28913126,28913601-28913643,28913969-28914036,
28914264-28914323,28914409-28914529,28915167-28915267,
28915354-28915494
Length = 873
Score = 130 bits (315), Expect = 8e-31
Identities = 68/159 (42%), Positives = 100/159 (62%), Gaps = 5/159 (3%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED+ L+E+L + V + + + AL+ + IR++T+SMTSVPKPLKFLR HY
Sbjct: 48 SEEDQALKEQLELYVVRAQDTDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGT 107
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
LK +E + + KK+ AD++SVLA+ T+ +RE L Y ++G+ ++G WGHEYV
Sbjct: 108 LKAYFETMPESDLKKYMADILSVLAL----TMSAEGERESLNYRMIGSEGDIGSWGHEYV 163
Query: 584 RQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHS 685
R L GEIA+E+ DSL LV +++F MKH+
Sbjct: 164 RNLAGEIAQEFQKRQDDGMPTDSLKELVEQIVSFHMKHN 202
>02_01_0356 +
2563773-2563898,2564031-2564131,2564375-2564498,
2564592-2564651,2564762-2564829,2565520-2565562,
2566026-2566091,2566237-2566275,2566375-2566457,
2566654-2566765,2566840-2566923,2567026-2567184,
2567268-2567372,2567451-2567555,2567661-2567801,
2567920-2568024,2568111-2568335,2568762-2568875,
2568963-2569178,2569674-2569733,2569827-2569940,
2570047-2570132,2570211-2570319,2570408-2570586,
2570673-2570741,2570792-2571005
Length = 968
Score = 129 bits (311), Expect = 2e-30
Identities = 69/160 (43%), Positives = 103/160 (64%), Gaps = 6/160 (3%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED L+E+L + V + + + AL+ + IR++T+SMTSVPKPLKFLR HY
Sbjct: 43 SEEDLALKEQLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGT 102
Query: 404 LKQVYEKITDEK-TKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEY 580
LK +E + + K++ AD++SVLA+ T+ +RE LKY LLG+ ++G WGHEY
Sbjct: 103 LKSYFETMPESSDLKRYMADILSVLAL----TMSAEGERESLKYRLLGSEGDIGSWGHEY 158
Query: 581 VRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHS 685
VR L GEIA+E+ +D+L+ LV+ +++F MKH+
Sbjct: 159 VRNLAGEIAQEFQKRQDDDMPIDALMELVQQIVSFHMKHN 198
>09_02_0460 +
9567656-9567766,9567849-9567949,9568527-9568647,
9568733-9568792,9569022-9569089,9569469-9569535,
9569586-9569666,9570152-9570217,9570372-9570410,
9570527-9570609,9570712-9570823,9570902-9570982,
9571132-9571290,9571397-9571504,9571570-9571674,
9571765-9571905,9572007-9572147,9572205-9572426,
9573617-9573730,9573830-9574045,9574373-9574432,
9574513-9574626,9574735-9574820,9574904-9575012,
9575099-9575277,9575357-9575429
Length = 938
Score = 110 bits (265), Expect = 9e-25
Identities = 58/133 (43%), Positives = 88/133 (66%)
Frame = +2
Query: 224 SEEDKRLQEELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPA 403
SEED+ L+E+L + V + + + AL+ + IR++T+SMTSVPKPLKFLR HY
Sbjct: 38 SEEDQALKEQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGI 97
Query: 404 LKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYV 583
LK +E + + + KK+ AD++SVLA+ T+ +RE LKY ++G+ ++G WGHEYV
Sbjct: 98 LKAYFETMPESELKKYMADILSVLAL----TMSAEGERESLKYRMIGSEGDIGSWGHEYV 153
Query: 584 RQLEGEIAEEWNI 622
R L EI E+++
Sbjct: 154 R-LYLEITLEFSV 165
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Frame = +2
Query: 584 RQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHS 685
R L GEIA+E+ DSL LV +++F MKH+
Sbjct: 189 RNLAGEIAQEFQKRQDDGMTTDSLKELVEQIVSFHMKHN 227
>07_01_0071 - 522920-523063,524125-524212,524289-524677
Length = 206
Score = 31.5 bits (68), Expect = 0.65
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 479 MGVSGTLEVAEKRECLKYCLLGTLSNVGDWG-HEYVRQLEGEIAEE 613
M V L+V + KYCLLG LS W H+ +R+LE + E+
Sbjct: 123 MVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEK 168
>11_04_0450 -
17847676-17847841,17848024-17848131,17848223-17848377,
17848471-17848560,17848650-17848748,17848862-17848928,
17849028-17849124,17849357-17849492,17849579-17849634,
17849718-17849801,17849909-17850125
Length = 424
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 EELNMLVDKLLGNEVDLYFPALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKI 427
E+ + V + L E+ YF + TS + + LK+ A+ Y +
Sbjct: 232 EKATLSVKRRLACELVSYFSQAHYCLSGCDTSDSFGKKLLLFLKWKCMEAKAVAYYYHGL 291
Query: 428 TDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNV-GDWG 571
+K + + + +V + + L KR CL +CL ++ V WG
Sbjct: 292 VLDKGNEASSHISAVCCLSAADDLVADSKRACLSFCLANPITRVPPPWG 340
>07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146
Length = 171
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -3
Query: 606 AISPSNCLTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTPIAKTEITSAQNFFVFSSV 427
A+ L PQ P F VP R ++ TS PL P++ E NF
Sbjct: 46 AVGGGGVLPPQAPQPPRF-GVPPRFQVSEAMEEQTSSEPLDPLSHEEFLHMSNFVSSLYA 104
Query: 426 IFSYT 412
+ S+T
Sbjct: 105 VNSFT 109
>06_03_1248 + 28685911-28687719
Length = 602
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 624 SIFHSSAISPSNC-LTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTP 481
S+ SS+ SPS+ L S P S PRR K SA S P+TP
Sbjct: 58 SLHSSSSSSPSSSSLLSSSPSSKGTGTTPRRSADKAPSASAASSRPITP 106
>12_02_0359 +
17956816-17956915,17957255-17957347,17957583-17957813,
17958433-17958736,17959505-17960156
Length = 459
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 669 NVITSRTSGNNESM-FSIFHSSAISPSNCLTYSCPQSPTFDNVPRRQYFKHSLF 511
N++ + T G+N S S A+ P+ L + PQS + +P++Q K SLF
Sbjct: 264 NILQNNTKGDNWSEEMSSQADYAVIPAGSLM-NTPQSANLNPIPQQQRCKQSLF 316
>03_06_0010 +
30990002-30990273,30990372-30990488,30990581-30990668,
30991505-30991648
Length = 206
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 479 MGVSGTLEVAEKRECLKYCLLGTLSNVGDWG-HEYVRQLEGEIAEE 613
M + L+V + KYCLLG LS W ++ +R+LE + E+
Sbjct: 123 MVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIRELEEKRKEK 168
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 21 AAIATPNMLIKHPIHCYVFAPITGF 95
AA A P +L+ + C FAP++GF
Sbjct: 2 AAAALPRLLLAAAVLCAAFAPVSGF 26
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 236 CLPRTLQSWHSFSLGRKKSANS 171
CL +L WH FS+GR+ + S
Sbjct: 296 CLADSLPDWHEFSVGRQHGSGS 317
>08_01_0680 - 5958066-5960253,5960707-5961503
Length = 994
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 314 QMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITD 433
+ L+ L+ T++ + K + FL++ P + + EK+ D
Sbjct: 18 EKLTKLVEDKCTNLVGMSKNIVFLKDELPTMSALLEKLED 57
>02_02_0592 -
11934238-11934249,11934755-11934835,11935166-11935324,
11936362-11936442,11936523-11936591,11937147-11937260,
11937805-11937858,11938788-11938915,11940527-11940782
Length = 317
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/102 (24%), Positives = 44/102 (43%)
Frame = +2
Query: 311 LQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMGVS 490
L+ +N + ++ + ++ ++ L Y + K+ K E K D + +L V
Sbjct: 96 LKSKANNLEENSNLIGTMEHDIEILMNKYESTKKSQSKSYPESNVKALEDEVQLLWRVVR 155
Query: 491 GTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEW 616
E A+ E L G V E V+++EG IAE+W
Sbjct: 156 KMNENADSIESLAN---GAEKRVESLSSE-VKKMEGVIAEQW 193
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +2
Query: 323 SNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKT--KKFCADVISVLAMGVSGT 496
+ L+ S + ++ V LK L E + EK+ +T + + + A +
Sbjct: 984 TELMDRSPSILSGVLDLLKALWESGAQFIYILEKLRSSRTFWENLSCCIRAAFASYPIDS 1043
Query: 497 LEVAEKRECLKYCLLGTLSNV 559
+E ++++ L+YC LGT+ +
Sbjct: 1044 VETVDEKKSLRYCCLGTIFEI 1064
>08_01_0822 + 7976216-7978498,7978612-7978698,7979052-7979195
Length = 837
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 464 ISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGHEYVRQLEGEIAEEWNIENMDSL 640
+ V + GV LE+ R+ ++ + G N+ +W +EYV + G + E E++D +
Sbjct: 689 VDVYSFGVM-LLEIISCRKSMELKMAGEECNISEWAYEYV--VSGGLKEVAAGEDVDEV 744
>06_03_0492 -
21386587-21386700,21387471-21387599,21387715-21387790,
21387898-21387950,21388034-21388095,21388164-21388274,
21388361-21388527,21388804-21388869,21389416-21389505,
21389592-21389740,21390182-21390316,21390399-21390454,
21390630-21390663,21391908-21392018
Length = 450
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Frame = -3
Query: 234 SSSDVA-ELALIFFG-PQKISK*YVTDALRL-QLNNGTRIKQKTEKGNY*NPLSVQKHNN 64
+SS++A EL ++F G P++ + +L++ LN G+ K TE Y PL Q +N
Sbjct: 361 TSSELADELTMLFKGFPEECDE---LKSLKVGALNTGSSSKWSTEWERYALPLVNQVQHN 417
Query: 63 EWGV 52
WG+
Sbjct: 418 VWGM 421
>03_01_0296 + 2284385-2285629,2287632-2288594
Length = 735
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 433 ICNFFVYLFQCW--IMFP*EF*RFRYRSHRCC 344
IC FF++LF W +M E+ R RY RCC
Sbjct: 402 ICEFFMHLFSDWTKVMVVSEYVRKRY--VRCC 431
>01_06_1703 + 39301075-39301829,39302735-39303560
Length = 526
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 461 VISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGDWGH 574
VI +AM V+GTLEVA +R ++ L G + GD G+
Sbjct: 374 VILTVAMLVAGTLEVARRRVIARHGLYG---DDGDGGY 408
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,357,555
Number of Sequences: 37544
Number of extensions: 331035
Number of successful extensions: 865
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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