Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30n16
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025715-7|AAK68443.1| 178|Caenorhabditis elegans Hypothetical ... 139 2e-33
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 30 1.3
AF016445-1|AAC69057.2| 367|Caenorhabditis elegans Serpentine re... 30 1.3
Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF039049-7|AAB94243.2| 300|Caenorhabditis elegans Serpentine re... 29 2.3
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 4.0
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 4.0
AC024817-54|AAF59564.1| 229|Caenorhabditis elegans Hypothetical... 29 4.0
AL117195-20|CAB60768.1| 388|Caenorhabditis elegans Hypothetical... 28 5.3
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 7.0
U00032-9|AAA50631.1| 229|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 28 7.0
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z48795-5|CAA88729.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AC025715-7|AAK68443.1| 178|Caenorhabditis elegans Hypothetical
protein Y38F2AR.2 protein.
Length = 178
Score = 139 bits (336), Expect = 2e-33
Identities = 68/157 (43%), Positives = 101/157 (64%)
Frame = +2
Query: 155 TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAIIWFILVTAAS 334
TKEEELLL +S STK + FY NA I+S P++LF+ VH +EI +++ + L +
Sbjct: 5 TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGT 64
Query: 335 TWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKKNEVADY 514
+LL+LA +N K LKH +S + A DKKM+ KEK+ER L++KNEVAD
Sbjct: 65 AYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADT 124
Query: 515 EATTYSIFYNNALFLTIVILSSFYILRTFTPTVNYIV 625
E+T S+FY N+L+LTI+++S+F++L P N ++
Sbjct: 125 ESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 30.3 bits (65), Expect = 1.3
Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 6/180 (3%)
Frame = +2
Query: 35 LTYRILRVVLPLNSTQLLFVFVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSS 214
+T+ L V L + L+ +K LV+ +N TK + + S ++ S
Sbjct: 165 VTFDFLEVFLYFFNVILMICLLKRWKMNLVEKFPQN---ITKHMDYTPVNISIFLNCFVS 221
Query: 215 ALFYGN----AFIVSAIPIWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLK 382
FYG +FI++ I L + +I+ + TW + ++Y N +L
Sbjct: 222 IAFYGLFQLLSFILALITYHPNLETSPLNLYRSILNLYYMPFIWTWAVTISYSNRVQKLL 281
Query: 383 HXXXXXXXXXXXXXMSRKLAD--DKKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 556
+ A K+M + +++R L + DY TT +FYN F
Sbjct: 282 EEYKNGLEIIIPCLLFPIFAGLLVKEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 341
>AF016445-1|AAC69057.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein132 protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 449 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 556
K++ + EK ++ N+ DY TT +FYN F
Sbjct: 246 KEIRKAEKRRKVSTSFNKTKDYRRTTQLVFYNTIFF 281
>Z81571-3|CAB04613.1| 352|Caenorhabditis elegans Hypothetical
protein M01G12.4 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 449 KKMSRKEKDERILWKKNEVADYEATTYSIFYNNALF 556
K+M + +++R L + DY TT +FYN F
Sbjct: 239 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 274
>Z35604-3|CAA84679.1| 352|Caenorhabditis elegans Hypothetical
protein ZK1058.3 protein.
Length = 352
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = +2
Query: 113 TYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFW 271
T +K K F K +++L D+ + K + N +P W FW
Sbjct: 178 TLPMKKHESQKKHFEKHGKVMLMDYLEQETLKKERIIMRNEHWTWLVPYWAFW 230
>AF039049-7|AAB94243.2| 300|Caenorhabditis elegans Serpentine
receptor, class x protein63 protein.
Length = 300
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Frame = -1
Query: 562 SQEKCIIVEN*V-----CGSFI--ICHLILFPQDSFVLFFSAHFFIISKFPGHFTGNSIL 404
SQ KC+I+ + + G F ICH Q F+ F ++ +I + G F NS++
Sbjct: 118 SQTKCLILVSWMYSLTYAGLFYLRICHFRFDEQVQFLTFSNSRICMIVGWNGDFIKNSVI 177
Query: 403 PAHSNTVLQLELSVTVGKSQQ 341
A ++ L +VT+ KS+Q
Sbjct: 178 VA----IIMLLDTVTIMKSRQ 194
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 404 PCAQQHGASTGT*CY-GRQEPATRC*LPLPG*TK*LRCLFPMNVPSRTTKLE 252
PCA G TG+ C+ G Q T C P P RC P+NV + L+
Sbjct: 336 PCAPGQGCGTGSYCHVGAQTQTTVC-CPKPAAVD--RCQQPLNVGIGNSNLQ 384
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 404 PCAQQHGASTGT*CY-GRQEPATRC*LPLPG*TK*LRCLFPMNVPSRTTKLE 252
PCA G TG+ C+ G Q T C P P RC P+NV + L+
Sbjct: 336 PCAPGQGCGTGSYCHVGAQTQTTVC-CPKPAAVD--RCQQPLNVGIGNSNLQ 384
>AC024817-54|AAF59564.1| 229|Caenorhabditis elegans Hypothetical
protein Y54G2A.27 protein.
Length = 229
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 535 FLQ*CTFPDYCHLEQFLH---SAYIHTYS*LHCVSHGCIWTSCSTLHRNQ 675
+LQ P C L +H S+YI+ YS LH +SH T+ +T N+
Sbjct: 63 YLQMLFRPSVCPLHPSIHLSSSSYIYIYSQLHMLSHNGGPTTTTTTTPNR 112
>AL117195-20|CAB60768.1| 388|Caenorhabditis elegans Hypothetical
protein Y57A10A.27 protein.
Length = 388
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 95 FVKVKVTYLVKMSGKNNKAFTKEEELLLQDFSRNVSTKSSAL 220
F+KV +T L + + K+ K ELL++ R STK+SAL
Sbjct: 10 FLKVDLTRLAEDDETHQKSTKKHTELLIELIDRK-STKASAL 50
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical
protein F48E3.3 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -2
Query: 186 KSCNNNS-SSFVKALL-FFPDIFTK*VTLTFTNTNKSCVLFSGKTTLKILYVSFL--AFF 19
K+C +NS SS+++A L F P K + L +N + SGK T L V + A F
Sbjct: 757 KACESNSISSYIRAALDFLPMDQAKRLILKLSNEEYAADFISGKITFDDLSVGGMDTAKF 816
Query: 18 AGERK 4
++K
Sbjct: 817 LADKK 821
>U00032-9|AAA50631.1| 229|Caenorhabditis elegans Hypothetical
protein F37A4.3 protein.
Length = 229
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +2
Query: 452 KMSRKEKDERILWKKNEVADYEATTYSIFYNNALFLTI 565
++ + +++++ W A+YEA + ++N +LFLT+
Sbjct: 15 RVGKLMRNDKLAWS----AEYEAKKFKFYHNTSLFLTL 48
>AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2
Query: 167 ELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHSLEISTAII 307
E+L VS++ + N +AIP+W+ W + +ST ++
Sbjct: 530 EILRFPIDGRVSSQKCVVNIDNMSSSNAIPMWMEWEFGGINLSTGLL 576
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 250 NSNLVVLEGTFIGNKHRNYLVYPGN 324
++NL++ + FIGN N LVYP +
Sbjct: 581 SANLIIDDPIFIGNVPNNSLVYPSS 605
>Z48795-5|CAA88729.1| 337|Caenorhabditis elegans Hypothetical
protein R05H5.6 protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 59 VLPLNSTQLLFVFVKVKVTYLVKMSGKNNKA--FTKEEELLLQDFSRNVS 202
+L +NS L+F + VK+ ++K +N+ + + EE ++ FS +S
Sbjct: 188 LLAINSVNLVFNYFLVKINTILKEKWRNSLSTRYQMEENIITTKFSTFIS 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,559,018
Number of Sequences: 27780
Number of extensions: 332101
Number of successful extensions: 953
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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