Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30n15
(325 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 1.1
05_01_0493 + 4113869-4116728,4116859-4117370 28 1.9
12_01_0302 - 2286171-2286341,2286747-2286968 27 3.4
10_01_0259 - 2719483-2719556,2719681-2720803 27 3.4
09_04_0220 - 15813809-15815380 27 3.4
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 27 3.4
12_01_0228 - 1726856-1727049,1727280-1727355,1727454-1727585,172... 27 4.5
11_02_0038 - 7631462-7634428,7635975-7636250 27 4.5
11_01_0231 - 1791754-1791947,1792178-1792253,1792352-1792483,179... 27 4.5
06_03_0585 - 22528082-22530100 27 4.5
06_03_0580 + 22489184-22491202 27 4.5
04_03_0940 - 20943986-20944216,20944301-20944500,20944506-20944791 27 4.5
02_04_0192 + 20795659-20796309 26 5.9
02_03_0119 - 15457691-15458687,15458768-15458934,15459019-15459123 26 5.9
11_05_0091 - 18982390-18982948,18983088-18983173 26 7.8
10_06_0145 + 11215895-11216860 26 7.8
01_07_0147 - 41474003-41474308,41474706-41474750 26 7.8
01_07_0143 - 41443030-41443335,41443733-41443777 26 7.8
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 26 7.8
01_01_0490 + 3620523-3623403,3623524-3623996 26 7.8
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 261 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 115
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 91 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVS 234
+PP+D LY + + D +L A++ S E+YR + S V+
Sbjct: 753 SPPWDVTLYQKLEIGVSDVARSLTPANVIGHGWSGEVYRASMPSSGVT 800
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 253 RLQRSRKKHGENLPTGGRSRRKGEKLE*MQREEQ 152
RL+R RK + ++ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>10_01_0259 - 2719483-2719556,2719681-2720803
Length = 398
Score = 27.1 bits (57), Expect = 3.4
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -2
Query: 273 KGLRFYVDSKGV-GRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEG 97
+ L +V ++GV GRN VD GG R CR + + + D+VV + G
Sbjct: 74 RDLPSFVPAEGVPGRNRMD----GVDDGGDARMFIDCRHGRALLRRYDWADLVVWDPMTG 129
Query: 96 RSRKVAGGIEDVDSG 52
R++AG + + G
Sbjct: 130 ERRRIAGPNQKMQGG 144
>09_04_0220 - 15813809-15815380
Length = 523
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +1
Query: 19 ELALKVSSIIGTRVYVFDPSCYFSTPPFDTV----LYDNIRTVLKDNKTALLSASIQASL 186
EL V+ ++G F P CYF + + +YD ++ L + A + S
Sbjct: 29 ELRAAVARLLGRATRAFSPYCYFDVTETEGMGTNEIYDAVQLYLSSSAAPAAGARLTLSR 88
Query: 187 P 189
P
Sbjct: 89 P 89
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 58 VYVFDPSCYFSTPPFDTVLYD-NIRTVLK-DNKTALLSASIQAS 183
V + D SC TP FDT + + N+ T K + A+L SI AS
Sbjct: 2535 VSILDSSCGMVTPIFDTTIANINLATHGKFETMNAVLICSISAS 2578
>12_01_0228 -
1726856-1727049,1727280-1727355,1727454-1727585,
1727665-1727775,1727892-1727942,1728114-1728275,
1729558-1729584
Length = 250
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = -2
Query: 294 QPKTVKNKGLRFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 115
+P V + L+ ++ + L + RER + ++++PD
Sbjct: 90 KPVAVYSSDLKRAAETAQTIATACNVSNLVLSPALRERHMGDLHGLKFDDAVRSKPDAYK 149
Query: 114 QYGIEGRSRKVAGGIEDVD 58
+ E RS+++ GG E +D
Sbjct: 150 AFSSEDRSQEIPGGGESLD 168
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 79 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQ 177
CYF P + + +R + NKT +LS+ ++
Sbjct: 585 CYFDQLPLEPTTWSKLRRISIVNKTDMLSSVVE 617
>11_01_0231 -
1791754-1791947,1792178-1792253,1792352-1792483,
1792563-1792673,1792790-1792840,1793012-1793122
Length = 224
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = -2
Query: 294 QPKTVKNKGLRFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 115
+P V + L+ ++ + L + RER + ++++PD
Sbjct: 64 KPVAVYSSDLKRAAETAQTIATACNVSNLVLSPALRERHMGDLHGLKFEDAVRSKPDAYK 123
Query: 114 QYGIEGRSRKVAGGIEDVD 58
+ E RS+++ GG E +D
Sbjct: 124 AFSSEDRSQEIPGGGESLD 142
>06_03_0585 - 22528082-22530100
Length = 672
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 65 SSIPPATFRLLPSIPYCTTTSGRFL 139
+S PPAT RLL S +S RFL
Sbjct: 89 ASFPPATGRLLESFVNSAVSSSRFL 113
>06_03_0580 + 22489184-22491202
Length = 672
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 65 SSIPPATFRLLPSIPYCTTTSGRFL 139
+S PPAT RLL S +S RFL
Sbjct: 89 ASFPPATGRLLESFVNSAVSSSRFL 113
>04_03_0940 - 20943986-20944216,20944301-20944500,20944506-20944791
Length = 238
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 114 QYGIEGRSRKVAGGIEDVDSGAYDRRNLEG 25
+YG G R AG +D +SG Y+R + G
Sbjct: 4 EYGRGGYGRSGAGAGDDYESGGYNRSSSGG 33
>02_04_0192 + 20795659-20796309
Length = 216
Score = 26.2 bits (55), Expect = 5.9
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 132 GS*GQQNCSSLCIYSSFSPFLRDLPPVGRFSPCFFRLLWS-LRKILIPYS 278
G G + S SS SPF+ LPP SP F R L S LR +P+S
Sbjct: 33 GGGGSSSSFSSTNSSSSSPFVSFLPPPTSPSP-FHRFLPSPLRASSVPFS 81
>02_03_0119 - 15457691-15458687,15458768-15458934,15459019-15459123
Length = 422
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 11 LIRNWPSRFLLS*APESTSSIPPATFRLLPSIPYCTTTSGR 133
+ R P +FL+ P S S + +LLPS P+ + G+
Sbjct: 275 IARQTPHKFLVKSPPSSLGSKLKSHGKLLPSRPFTVSPPGK 315
>11_05_0091 - 18982390-18982948,18983088-18983173
Length = 214
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 120 VVQYGIEGRSRKVAGGIEDVDSGAYDRR 37
VV +EGR R+ GG+ SG RR
Sbjct: 84 VVAVAVEGRRRRSGGGVGLAGSGLEQRR 111
>10_06_0145 + 11215895-11216860
Length = 321
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 50 APESTSSIPPATFRLLPSIPYCTTTSGRFLRTT 148
AP ST++ PP + R++ + P C + S TT
Sbjct: 217 APASTNTTPPPSPRVVKTEPGCCSVSEASTTTT 249
>01_07_0147 - 41474003-41474308,41474706-41474750
Length = 116
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 246 KGVGRNMARIYQLAVDLGGRERSLNRCREK-SSFVVLKNRPDVVVQYGIEGRSRKVAGGI 70
+G G A + + G ER R R+ S VVL R + +EG +A GI
Sbjct: 43 RGFGAQAAALALPILAPRGGERHGERVRKTVESSVVLPKRATTGSTWKVEGIGLGIASGI 102
Query: 69 ED 64
ED
Sbjct: 103 ED 104
>01_07_0143 - 41443030-41443335,41443733-41443777
Length = 116
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 246 KGVGRNMARIYQLAVDLGGRERSLNRCREK-SSFVVLKNRPDVVVQYGIEGRSRKVAGGI 70
+G G A + + G ER R R+ S VVL R + +EG +A GI
Sbjct: 43 RGFGAQAAALALPILAPRGGERHGERVRKTVESSVVLPKRATTGSTWKVEGIGLGIASGI 102
Query: 69 ED 64
ED
Sbjct: 103 ED 104
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 108 GIEGRSRKVAGGIEDVDSGAYDRRNLEGQFLMSY 7
G + R RK G EDVD+ D LEG MSY
Sbjct: 66 GEDKRKRKRRGDGEDVDNSESDAAKLEG---MSY 96
>01_01_0490 + 3620523-3623403,3623524-3623996
Length = 1117
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 94 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVS 234
PP+D LY + + D +L A++ S +YR + S V+
Sbjct: 765 PPWDVTLYQKLEISVGDVARSLTPANVIGQGWSGAVYRASIPSTGVA 811
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,388,128
Number of Sequences: 37544
Number of extensions: 154948
Number of successful extensions: 459
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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