Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30n15
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical p... 28 1.3
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 27 3.1
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 27 3.1
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical pr... 26 7.2
U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical pr... 26 7.2
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 26 7.2
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 26 7.2
AF100663-2|AAC68981.2| 532|Caenorhabditis elegans Udp-glucurono... 26 7.2
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 26 7.2
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 26 7.2
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 25 9.5
U53332-9|AAO38632.1| 392|Caenorhabditis elegans Ceramide glucos... 25 9.5
U53332-8|AAL32224.1| 459|Caenorhabditis elegans Ceramide glucos... 25 9.5
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 25 9.5
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 25 9.5
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 25 9.5
DQ178632-1|ABD75711.1| 392|Caenorhabditis elegans ceramide glyc... 25 9.5
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 25 9.5
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 25 9.5
AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical ... 25 9.5
AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z81593-10|CAI94504.1| 349|Caenorhabditis elegans Hypothetical
protein T20B3.15 protein.
Length = 349
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 64 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHV-SSD 240
++D +C F+ + + YD I T + LS S AS+ S R L+ + V S
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294
Query: 241 SFGVYVKS*SLIL 279
+ G + S LIL
Sbjct: 295 AIGGFAFSDDLIL 307
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 209 WR*ISEEGREA*IDAERRAVLLSLRTVLMLSYNTVS 102
W + GR + A L SLRT+LMLS N+++
Sbjct: 50 WNRVDRHGRTPLMLAAHNGKLDSLRTILMLSPNSLN 85
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 209 WR*ISEEGREA*IDAERRAVLLSLRTVLMLSYNTVS 102
W + GR + A L SLRT+LMLS N+++
Sbjct: 50 WNRVDRHGRTPLMLAAHNGKLDSLRTILMLSPNSLN 85
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 142 DNKTALLSASIQASLPSSEIYRQLVDSRHVSSDSFGVYVKS 264
+N +LL A + +LP S ++ L+D+RH+ Y+++
Sbjct: 42 ENLVSLL-ALLSDTLPPSTLFTVLLDTRHIQLKQLKFYLRA 81
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 271 GIKILRRLQRSRKKHGENLPTGGRSRRKGE 182
G + R RKKHG ++ GR RR G+
Sbjct: 97 GNDMKHRENMDRKKHGTHVDHHGRVRRNGD 126
>Z66516-4|CAA91359.2| 500|Caenorhabditis elegans Hypothetical
protein W03C9.6 protein.
Length = 500
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 234 FRLLWSLRKILIPYSSQFWVVSFIAL*Q 317
F LW++ I++ S +W+ +F L Q
Sbjct: 471 FETLWTINGIVVALGSIYWIANFSRLRQ 498
>U80954-5|AAB38096.1| 822|Caenorhabditis elegans Hypothetical
protein T07F8.1 protein.
Length = 822
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 250 LQRSRKKHGENLPTGGRSRRKGEKLE 173
+ + RK+HG+NL G + +K ++LE
Sbjct: 2 VSKKRKEHGKNLGVLGPAAKKQKRLE 27
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -2
Query: 201 DLGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRSRKVAGGIEDVDSGAYDRRNLEGQ 22
+L G+ LNR +++ V DV YG + R + D S YDR L+G+
Sbjct: 613 ELTGKGSQLNRFPQRACKVFC----DVQQHYGSQRNYRFFGDNLPDGTSCGYDRYCLDGE 668
Query: 21 FL 16
L
Sbjct: 669 CL 670
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -2
Query: 201 DLGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRSRKVAGGIEDVDSGAYDRRNLEGQ 22
+L G+ LNR +++ V DV YG + R + D S YDR L+G+
Sbjct: 613 ELTGKGSQLNRFPQRACKVFC----DVQQHYGSQRNYRFFGDNLPDGTSCGYDRYCLDGE 668
Query: 21 FL 16
L
Sbjct: 669 CL 670
>AF100663-2|AAC68981.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein19 protein.
Length = 532
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -2
Query: 204 VDLGGRERSLNRCRE-KSSFV-VLKNRPDVVVQYGIEGRSRKVAGGIEDVDSGAYDRRN 34
+ G RS++ E K++F+ V+K+ PD + E + K GIE+V G + +N
Sbjct: 301 ISFGSNARSVDMPLEYKNTFLQVIKSMPDTTFIWKYEDLNDKFTEGIENVYLGDWLPQN 359
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 265 KILRRLQRSRKKHGENLPTGGRSRRKGEKLE*MQREEQF 149
++L L +K GE +P GRS K+E M + F
Sbjct: 761 QLLNTLNEMKKALGEGVPKSGRSLNSTCKIETMTNKTPF 799
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -2
Query: 201 DLGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRSRKVAGGIEDVDSGAYDRRNLEGQ 22
+L G+ LNR +++ V DV YG + R + D S YDR L+G+
Sbjct: 613 ELTGKGSQLNRFPQRACKVFC----DVQQHYGSQRNYRFFGDNLPDGTSCGYDRYCLDGE 668
Query: 21 FL 16
L
Sbjct: 669 CL 670
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 11 LIRNWPSRFLLS*APESTSSIPPATFRLLPSIPYCTTTSGRFLR 142
+IR+WP F + +++ P + FRLL + T + +R
Sbjct: 334 IIRSWPGLFACAAVGPNSNIRPSSPFRLLDYLGLGTVANDNLVR 377
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -2
Query: 243 GVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYGIEGRSRKVAG 76
G G R + A+++ G + LN+C + ++L V I+ KVAG
Sbjct: 185 GCGGGCGRKKREAINVVGHD-DLNKCNNEELRIILNENTKETVAESIKTLKEKVAG 239
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 117 VQYGIEGRSRKVAGGIEDVDSGAY 46
+ YG RK A G ED +GAY
Sbjct: 791 IHYGARKSKRKFANGNEDNPAGAY 814
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 117 VQYGIEGRSRKVAGGIEDVDSGAY 46
+ YG RK A G ED +GAY
Sbjct: 789 IHYGARKSKRKFANGNEDNPAGAY 812
>U53332-9|AAO38632.1| 392|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform d protein.
Length = 392
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 219 FSPCFFRLLWSLRKILIPY 275
FSP F L+W LR++ P+
Sbjct: 343 FSPLQFMLIWLLRELTAPF 361
>U53332-8|AAL32224.1| 459|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform a protein.
Length = 459
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 219 FSPCFFRLLWSLRKILIPY 275
FSP F L+W LR++ P+
Sbjct: 410 FSPLQFMLIWLLRELTAPF 428
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 219 FSPCFFRLLWSLRKILIPY 275
FSP F L+W LR++ P+
Sbjct: 421 FSPLQFMLIWLLRELTAPF 439
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 219 FSPCFFRLLWSLRKILIPY 275
FSP F L+W LR++ P+
Sbjct: 421 FSPLQFMLIWLLRELTAPF 439
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 219 FSPCFFRLLWSLRKILIPY 275
FSP F L+W LR++ P+
Sbjct: 421 FSPLQFMLIWLLRELTAPF 439
>DQ178632-1|ABD75711.1| 392|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 392
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 219 FSPCFFRLLWSLRKILIPY 275
FSP F L+W LR++ P+
Sbjct: 343 FSPLQFMLIWLLRELTAPF 361
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 11 LIRNWPSRFLLS*APESTSSIPPATFRLLPSIPYCTTTSGRFLR 142
+IR+WP F + +++ P + FRLL + T + +R
Sbjct: 334 IIRSWPGLFACAAVGPNSNIRPSSPFRLLDYLGLGTVANDNLVR 377
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 204 VDLGGRERSLNRCRE-KSSFV-VLKNRPDVVVQYGIEGRSRKVAGGIEDVDSGAYDRRN 34
+ G RS++ E K +F+ V+K+ PD + E + K GIE+V G + +N
Sbjct: 298 ISFGSNARSVDMPLEYKKTFLQVIKSMPDTTFIWKYEDLNDKFTEGIENVYLGDWLPQN 356
>AC006808-4|AAF60815.3| 397|Caenorhabditis elegans Hypothetical
protein Y58G8A.4a protein.
Length = 397
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 147 QNCSSLCIYSSFSPFLRDLPPVGRFSPCFFRLLWSLRKILIPYSSQF 287
Q+ +S IY + L+ + P+ + C+F++L + K +I ++QF
Sbjct: 219 QSENSRKIYGTTVMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQF 265
>AC006808-3|AAT68889.1| 433|Caenorhabditis elegans Hypothetical
protein Y58G8A.4b protein.
Length = 433
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 147 QNCSSLCIYSSFSPFLRDLPPVGRFSPCFFRLLWSLRKILIPYSSQF 287
Q+ +S IY + L+ + P+ + C+F++L + K +I ++QF
Sbjct: 219 QSENSRKIYGTTVMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQF 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,992,753
Number of Sequences: 27780
Number of extensions: 125862
Number of successful extensions: 406
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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