Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30n08
         (310 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81119-6|CAB03337.2|  401|Caenorhabditis elegans Hypothetical pr...    28   1.5  
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    27   3.5  
U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical pr...    27   3.5  
AF098993-5|AAC67468.1|  325|Caenorhabditis elegans Hypothetical ...    27   3.5  
Z34800-1|CAA84321.2|  420|Caenorhabditis elegans Hypothetical pr...    26   6.2  
AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine re...    26   6.2  
AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine re...    26   6.2  
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    25   8.1  
U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical pr...    25   8.1  

>Z81119-6|CAB03337.2|  401|Caenorhabditis elegans Hypothetical
           protein T10H4.8 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 144 FFFERTFELVSQSIFENLNKGKLWKDIKHKYEN*IVNVQFIS*FINLIK--ICYQKK 308
           +F   T E +   +F NLN G ++K +   + +  V +QF + FIN++   + +QK+
Sbjct: 5   YFHPETCENIG--LFSNLNCGDIYKKLGLLFADINVCLQFFTVFINILHLIVLFQKE 59


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 27  FDEKSDFLEKIFKMSVWSTLNRTVFKRTSTFAL 125
           F+E S F    + M    TLN+TV +RT  F++
Sbjct: 402 FEENSKFNPDRYLMPDGKTLNKTVLERTIPFSV 434


>U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical
           protein C09B9.2 protein.
          Length = 328

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 21  SSFDEKSDFLEKIFKMSVWSTLN 89
           SSF  KS F+E+IF MS  S+++
Sbjct: 148 SSFSSKSRFVEQIFGMSAVSSMS 170


>AF098993-5|AAC67468.1|  325|Caenorhabditis elegans Hypothetical
           protein T10B11.6 protein.
          Length = 325

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
 Frame = +1

Query: 19  FRALTRKVIFLRKFSKCPCGLH*IVLFSNVHLRLL-----WLLPEERSSLKEHLN*CLNR 183
           FRA+  K    R F+KCP  +H    FS   +R L     W   EE+  L+E +   +  
Sbjct: 123 FRAIDAKPGDFRSFAKCPIIVH---SFSMNGVRGLISFWKWTEAEEKPQLRERIKGII-- 177

Query: 184 YLKTSTKENYGRTSSTNMKI 243
              ++    YG+  +T M I
Sbjct: 178 -FDSAPSRPYGKQDATAMVI 196


>Z34800-1|CAA84321.2|  420|Caenorhabditis elegans Hypothetical
           protein F45H7.1 protein.
          Length = 420

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 96  VFKRTSTFALAVAGGTFFF 152
           V KR++TF+L +AG  FFF
Sbjct: 401 VAKRSNTFSLQLAGEFFFF 419


>AF067211-6|AAC16989.1|  308|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform a protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 56  NFQNVRVVYIKSYCFQTYIYVCFGCCRRNVL 148
           N  N++++ + S+ F+ +  V FGC  RNV+
Sbjct: 268 NRNNLKIL-LTSFNFKKFFAVIFGCTGRNVV 297


>AF067211-5|AAW88420.1|  329|Caenorhabditis elegans Serpentine
           receptor, class z protein85, isoform b protein.
          Length = 329

 Score = 25.8 bits (54), Expect = 6.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 56  NFQNVRVVYIKSYCFQTYIYVCFGCCRRNVL 148
           N  N++++ + S+ F+ +  V FGC  RNV+
Sbjct: 289 NRNNLKIL-LTSFNFKKFFAVIFGCTGRNVV 318


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 53  ENFQNVRVV-YIKSYCFQTYIYVCFGCCRRNVLL*KN 160
           E   N+ VV YI ++ F TY+ + F CC   + L KN
Sbjct: 173 ETRHNIYVVKYILAFLF-TYLQMHFLCCNSKIDLPKN 208


>U39644-2|AAA80360.2|  966|Caenorhabditis elegans Hypothetical protein
            T10E10.4 protein.
          Length = 966

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 1    DLSIDQFRALTRKVIFLRKFSKCPCGLH*IVLF-SNVHLRLLWLLPEERSSLKEHLN 168
            D ++ Q +     +++ R FS+CP G H    F  +      W+  E + +LK  LN
Sbjct: 906  DKNVPQCQCTNGMLLYGRCFSQCPRGFHESGAFCMHDDEDKFWMDAESQDNLKALLN 962


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,523,453
Number of Sequences: 27780
Number of extensions: 116464
Number of successful extensions: 264
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)