Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30n06
         (228 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   0.83 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    19   5.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    19   5.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    19   5.9  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    19   7.8  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    19   7.8  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    19   7.8  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    19   7.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    19   7.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   7.8  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 113 IKIEIYHSLFLPSCL*IMTDLVQFVYFNKI 202
           +KI+ Y     PS   I+ +   F+YFN +
Sbjct: 1   VKIQKYFGKNFPSTSFILINYFIFLYFNSL 30


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2
          protein.
          Length = 162

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 19 KRRNSCCRVH*SLP 60
          K  ++CCR H   P
Sbjct: 53 KHTDACCRTHDMCP 66


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 19 KRRNSCCRVH*SLP 60
          K  ++CCR H   P
Sbjct: 58 KHTDACCRTHDMCP 71


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 19 KRRNSCCRVH*SLP 60
          K  ++CCR H   P
Sbjct: 58 KHTDACCRTHDMCP 71


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 89  INESEIFNIKIEIYHSLFLP 148
           IN  E   I + +Y+  FLP
Sbjct: 112 INYIEQIPIPVPVYYGNFLP 131


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 89  INESEIFNIKIEIYHSLFLP 148
           IN  E   I + +Y+  FLP
Sbjct: 112 INYIEQIPIPVPVYYGNFLP 131


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 89  INESEIFNIKIEIYHSLFLP 148
           IN  E   I + +Y+  FLP
Sbjct: 112 INYIEQIPIPVPVYYGNFLP 131


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 89  INESEIFNIKIEIYHSLFLP 148
           IN  E   I + +Y+  FLP
Sbjct: 112 INYIEQIPIPVPVYYGNFLP 131


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 183 N*TKSVIIYKQEGKNKEWYISIFMLKISDSFIMHIN*TNQL 61
           N T   +I K           +F L ISD  ++ +   N+L
Sbjct: 58  NITTCTVIIKNPAMQTATNYYLFSLAISDLILLVLGLPNEL 98


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +2

Query: 17  PNEGTAAVVFIEACPN 64
           P   TAA + +  CP+
Sbjct: 844 PASSTAATLVLSGCPS 859


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,014
Number of Sequences: 438
Number of extensions: 877
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)