Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc30n03
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042335-1|AAH42335.1| 279|Homo sapiens Unknown (protein for IM... 123 5e-28
BC121119-1|AAI21120.1| 280|Homo sapiens CGI-96 protein protein. 123 6e-28
BC121118-1|AAI21119.1| 280|Homo sapiens CGI-96 protein protein. 123 6e-28
BC073834-1|AAH73834.1| 280|Homo sapiens CGI-96 protein protein. 123 6e-28
BC041639-1|AAH41639.1| 278|Homo sapiens Unknown (protein for IM... 123 6e-28
BC031838-1|AAH31838.1| 264|Homo sapiens Similar to CGI-96 prote... 123 6e-28
AL022316-3|CAI41665.1| 325|Homo sapiens protein ( (beta-1,4-)-g... 123 6e-28
AY039240-1|AAK68659.1| 249|Homo sapiens gastric cancer antigen ... 117 4e-26
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 35 0.21
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 35 0.21
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 35 0.21
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 35 0.21
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 35 0.21
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 35 0.21
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 33 0.65
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 33 0.65
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 33 0.65
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 32 1.5
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.5
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 32 1.5
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 32 1.5
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.5
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.5
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 32 1.5
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 32 1.5
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 32 1.5
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.5
AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b, sub... 32 1.5
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.5
AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b, sub... 32 1.5
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 32 1.5
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 32 1.5
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 32 1.5
BC037404-1|AAH37404.1| 1015|Homo sapiens formin binding protein ... 32 2.0
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 32 2.0
AB023231-1|BAA76858.2| 1050|Homo sapiens KIAA1014 protein protein. 32 2.0
AB011422-1|BAA76314.1| 1289|Homo sapiens Trad protein. 32 2.0
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 32 2.0
BC063041-1|AAH63041.1| 1129|Homo sapiens WD repeat and HMG-box D... 31 3.4
AK093225-1|BAC04101.1| 178|Homo sapiens protein ( Homo sapiens ... 31 3.4
AJ006266-1|CAA06932.1| 1129|Homo sapiens AND-1 protein protein. 31 3.4
D38491-1|BAA07503.1| 227|Homo sapiens KIAA0117 protein. 31 4.6
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 31 4.6
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 31 4.6
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 31 4.6
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 31 4.6
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 31 4.6
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 30 6.0
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 30 6.0
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 30 6.0
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 30 6.0
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 30 6.0
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 30 6.0
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 30 8.0
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 30 8.0
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 30 8.0
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 30 8.0
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 30 8.0
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 30 8.0
>BC042335-1|AAH42335.1| 279|Homo sapiens Unknown (protein for
IMAGE:5744277) protein.
Length = 279
Score = 123 bits (297), Expect = 5e-28
Identities = 61/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 22 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 81
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G I SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 82 GLIQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 141
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 142 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 186
>BC121119-1|AAI21120.1| 280|Homo sapiens CGI-96 protein protein.
Length = 280
Score = 123 bits (296), Expect = 6e-28
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 23 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 82
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G + SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 83 GLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 142
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 143 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 187
>BC121118-1|AAI21119.1| 280|Homo sapiens CGI-96 protein protein.
Length = 280
Score = 123 bits (296), Expect = 6e-28
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 23 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 82
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G + SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 83 GLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 142
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 143 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 187
>BC073834-1|AAH73834.1| 280|Homo sapiens CGI-96 protein protein.
Length = 280
Score = 123 bits (296), Expect = 6e-28
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 23 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 82
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G + SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 83 GLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 142
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 143 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 187
>BC041639-1|AAH41639.1| 278|Homo sapiens Unknown (protein for
IMAGE:5094598) protein.
Length = 278
Score = 123 bits (296), Expect = 6e-28
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 21 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 80
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G + SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 81 GLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 140
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 141 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 185
>BC031838-1|AAH31838.1| 264|Homo sapiens Similar to CGI-96 protein
protein.
Length = 264
Score = 123 bits (296), Expect = 6e-28
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 7 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 66
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G + SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 67 GLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 126
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 127 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 171
>AL022316-3|CAI41665.1| 325|Homo sapiens protein (
(beta-1,4-)-glycoprotein ).).
Length = 325
Score = 123 bits (296), Expect = 6e-28
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Frame = +2
Query: 155 FKALALKLNDDSSCPHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEA 331
+ A+ +K ++ HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S
Sbjct: 68 YAAIPIKFSEKQQASHYLYVRAHGVRQGTKSTWPQKRTLFVLNVPPYCTEESLSRLLSTC 127
Query: 332 GPISSVKLCIKPNTME---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLN 502
G + SV+L KP+ E + KF K FQVAY+VF+K S + AL L ++
Sbjct: 128 GLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVS 187
Query: 503 SESYRIKTGIQKWIEEFNKEILQPKTLKENIEAFMKKYDSETAKE 637
+ES+ +K+GI KWI ++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 188 TESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEE 232
>AY039240-1|AAK68659.1| 249|Homo sapiens gastric cancer antigen
Zg14 protein.
Length = 249
Score = 117 bits (281), Expect = 4e-26
Identities = 58/150 (38%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Frame = +2
Query: 200 HYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTM 376
HY+Y + H VR+ TK P RT+F++NVPPY E+ L+ S G + SV+L KP+
Sbjct: 7 HYLYVRAHGVRQGTKSTXPQKRTLFVLNVPPYCTEESLSRLLSTCGLVQSVELQEKPDLA 66
Query: 377 E---DDIPKFISEKQKKSFQVAYLVFEKVSALDRALQLSELKPLNSESYRIKTGIQKWIE 547
E + KF K FQVAY+VF+K S + AL L +++ES+ +K+GI KWI
Sbjct: 67 ESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSAALALKGPLLVSTESHPVKSGIHKWIS 126
Query: 548 EFNKEILQPKTLKENIEAFMKKYDSETAKE 637
++ + P+ L+ ++ FM+ YD + A+E
Sbjct: 127 DYADSVPDPEALRVEVDTFMEAYDQKIAEE 156
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 35.1 bits (77), Expect = 0.21
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE GP+ S +L
Sbjct: 5 TVRDPAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRL 47
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 35.1 bits (77), Expect = 0.21
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE GP+ S +L
Sbjct: 5 TVRDPAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRL 47
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 35.1 bits (77), Expect = 0.21
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE GP+ S +L
Sbjct: 5 TVRDPAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRL 47
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 35.1 bits (77), Expect = 0.21
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE GP+ S +L
Sbjct: 5 TVRDPAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRL 47
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 35.1 bits (77), Expect = 0.21
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE GP+ S +L
Sbjct: 4 TVRDPAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRL 46
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 35.1 bits (77), Expect = 0.21
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE GP+ S +L
Sbjct: 5 TVRDPAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRL 47
>BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif protein
34 protein.
Length = 425
Score = 33.5 bits (73), Expect = 0.65
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 KLNDDSSCPHYIYFKEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVK 352
K+ DD+ K+ + + + RT+F+ N+P ++K L + F E G I SV+
Sbjct: 151 KILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 210
Query: 353 ---LCIKPNTMEDDIPKFISEKQKKSFQV-AYLVFEKVSALDRALQ 478
L T+ + + + AY+VF++ SA +AL+
Sbjct: 211 FRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALK 256
>AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.65
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 KLNDDSSCPHYIYFKEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVK 352
K+ DD+ K+ + + + RT+F+ N+P ++K L + F E G I SV+
Sbjct: 156 KILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 215
Query: 353 ---LCIKPNTMEDDIPKFISEKQKKSFQV-AYLVFEKVSALDRALQ 478
L T+ + + + AY+VF++ SA +AL+
Sbjct: 216 FRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALK 261
>AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 33.5 bits (73), Expect = 0.65
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 173 KLNDDSSCPHYIYFKEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVK 352
K+ DD+ K+ + + + RT+F+ N+P ++K L + F E G I SV+
Sbjct: 156 KILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 215
Query: 353 ---LCIKPNTMEDDIPKFISEKQKKSFQV-AYLVFEKVSALDRALQ 478
L T+ + + + AY+VF++ SA +AL+
Sbjct: 216 FRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQALK 261
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 215 KEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+E + T+D+ +F+ N+ D++ L F E GP SVK+
Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 230
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE G + S +L
Sbjct: 5 AVRDPAMDRSL-RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRL 47
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ N+P A E+ L + FSE G + S +L
Sbjct: 5 AVRDPAMDRSL-RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRL 47
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 215 KEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+E + T+D+ +F+ N+ D++ L F E GP SVK+
Sbjct: 20 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 66
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 215 KEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+E + T+D+ +F+ N+ D++ L F E GP SVK+
Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 230
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>AL591493-1|CAI12553.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 49 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 95
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>AL590487-1|CAI12647.1| 190|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 190
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 49 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 95
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 215 KEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+E + T+D+ +F+ N+ D++ L F E GP SVK+
Sbjct: 169 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 215
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 236 HTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPI-SSVKLCIKPNT 373
H K+ G IFI N+ P DEK L + FS G I + K+ P+T
Sbjct: 92 HNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDT 138
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 215 KEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+E + T+D+ +F+ N+ D++ L F E GP SVK+
Sbjct: 184 EERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKV 230
>BC037404-1|AAH37404.1| 1015|Homo sapiens formin binding protein 4
protein.
Length = 1015
Score = 31.9 bits (69), Expect = 2.0
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 197 PHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNT 373
P Y+ + ++ + P T F+VN Y+ EK ++ + S++GP+ + K +K
Sbjct: 244 PQYLATQVQGLQHYQPSSVPGAETSFVVNTDIYSKEKTISVSSSKSGPVIA-KREVKKEV 302
Query: 374 MEDDIPKFISEKQKKSFQVAYL 439
E SE++KK + L
Sbjct: 303 NEGIQALSNSEEEKKGVAASLL 324
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 218 EHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMED 382
+++ H P+ +++ N+ P +E+ L F GP++SVK+ + P T E+
Sbjct: 258 DYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKI-MWPRTDEE 311
>AB023231-1|BAA76858.2| 1050|Homo sapiens KIAA1014 protein protein.
Length = 1050
Score = 31.9 bits (69), Expect = 2.0
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 197 PHYIYFKEHSVREHTKDK-PAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNT 373
P Y+ + ++ + P T F+VN Y+ EK ++ + S++GP+ + K +K
Sbjct: 279 PQYLATQVQGLQHYQPSSVPGAETSFVVNTDIYSKEKTISVSSSKSGPVIA-KREVKKEV 337
Query: 374 MEDDIPKFISEKQKKSFQVAYL 439
E SE++KK + L
Sbjct: 338 NEGIQALSNSEEEKKGVAASLL 359
>AB011422-1|BAA76314.1| 1289|Homo sapiens Trad protein.
Length = 1289
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 332 GPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAY 436
G S VK CI T +D KF+S+K KK Q A+
Sbjct: 996 GRFSIVKKCIHKATRKDVAVKFVSKKMKKKEQAAH 1030
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 218 EHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMED 382
+++ H P+ +++ N+ P +E+ L F GP++SVK+ + P T E+
Sbjct: 259 DYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKI-MWPRTDEE 312
>BC063041-1|AAH63041.1| 1129|Homo sapiens WD repeat and HMG-box DNA
binding protein 1 protein.
Length = 1129
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 494 PLNSESYRIKTGIQKWIEEFNKEIL 568
P N+E+ R KTG Q W+EE IL
Sbjct: 1010 PQNTENQRPKTGFQMWLEENRSNIL 1034
>AK093225-1|BAC04101.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ35906 fis, clone TESTI2009727. ).
Length = 178
Score = 31.1 bits (67), Expect = 3.4
Identities = 24/90 (26%), Positives = 42/90 (46%)
Frame = +2
Query: 206 IYFKEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDD 385
I+ +E S+R++ ++ R F P E EA P S L KP+ D
Sbjct: 96 IFQEEESIRQNREESENCRKAFS---EPVLSEPMFAEGEIEAKPYRS--LPEKPDI--SD 148
Query: 386 IPKFISEKQKKSFQVAYLVFEKVSALDRAL 475
PK ++ KQ + QV + VF++ + ++ +
Sbjct: 149 YPKLLANKQSNNIQVLHSVFDQSAEMNEQI 178
>AJ006266-1|CAA06932.1| 1129|Homo sapiens AND-1 protein protein.
Length = 1129
Score = 31.1 bits (67), Expect = 3.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 494 PLNSESYRIKTGIQKWIEEFNKEIL 568
P N+E+ R KTG Q W+EE IL
Sbjct: 1010 PQNTENQRPKTGFQMWLEENRSNIL 1034
>D38491-1|BAA07503.1| 227|Homo sapiens KIAA0117 protein.
Length = 227
Score = 30.7 bits (66), Expect = 4.6
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 173 KLNDDSSCPHYIYFKEHSVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVK 352
K+ DD+ K+ + + + RT+F+ N+P ++K L + F E G I SV+
Sbjct: 158 KILDDTEDTVVSQRKKIQINQEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVR 217
>AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein.
Length = 281
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLC 358
A RT+F+ N+ E+ L F +AGP++ V +C
Sbjct: 8 ADRTVFVGNLEARVREEILYELFLQAGPLTKVTIC 42
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 266 IFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
I++ N+P DE+GL + FS+ G + SVK+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKV 222
Score = 30.3 bits (65), Expect = 6.0
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 263 TIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAYLV 442
++++ ++ P E L FS AGPI S+++C T ++S AY+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVAT-------------RRSLGYAYIN 58
Query: 443 FEKVSALDRALQLSELKPLNSESYRI 520
F++ + +RAL + L + RI
Sbjct: 59 FQQPADAERALDTMNFEMLKGQPIRI 84
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 266 IFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
I++ N+P DE+GL + FS+ G + SVK+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKV 222
Score = 30.3 bits (65), Expect = 6.0
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 263 TIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAYLV 442
++++ ++ P E L FS AGPI S+++C T ++S AY+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVAT-------------RRSLGYAYIN 58
Query: 443 FEKVSALDRALQLSELKPLNSESYRI 520
F++ + +RAL + L + RI
Sbjct: 59 FQQPADAERALDTMNFEMLKGQPIRI 84
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 266 IFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
I++ N+P DE+GL + FS+ G + SVK+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKV 222
Score = 30.3 bits (65), Expect = 6.0
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 263 TIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAYLV 442
++++ ++ P E L FS AGPI S+++C T ++S AY+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVAT-------------RRSLGYAYIN 58
Query: 443 FEKVSALDRALQLSELKPLNSESYRI 520
F++ + +RAL + L + RI
Sbjct: 59 FQQPADAERALDTMNFEMLKGQPIRI 84
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 266 IFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
I++ N+P DE+GL + FS+ G + SVK+
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKV 222
Score = 30.3 bits (65), Expect = 6.0
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +2
Query: 263 TIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAYLV 442
++++ ++ P E L FS AGPI S+++C T ++S AY+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVAT-------------RRSLGYAYIN 58
Query: 443 FEKVSALDRALQLSELKPLNSESYRI 520
F++ + +RAL + L + RI
Sbjct: 59 FQQPADAERALDTMNFEMLKGQPIRI 84
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
AG IF+ N+ P ADE L F G +++VK+
Sbjct: 282 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 315
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPI 340
AG T+F+ +PP A + L FS+ GP+
Sbjct: 2 AGLTLFVGRLPPSARSEQLEELFSQVGPV 30
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
AG IF+ N+ P ADE L F G +++VK+
Sbjct: 275 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 308
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 30.3 bits (65), Expect = 6.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
AG IF+ N+ P ADE L F G +++VK+
Sbjct: 233 AGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 266
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 224 SVREHTKDKPAGRTIFIVNVPPYADEKGLTNAFSEAGPISSVKL 355
+VR+ D+ R++F+ ++P A E+ L + FSE G + S +L
Sbjct: 5 AVRDPAMDRSL-RSVFVGSIPYEATEEQLKDIFSEVGSVVSFRL 47
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPI 340
AG T+F+ +PP A + L FS+ GP+
Sbjct: 2 AGLTLFVGRLPPSARSEQLEELFSQVGPV 30
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 257 GRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAY 436
G IF+ N+ P ADE L F G +++VK+ NT + F++ +A
Sbjct: 262 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 321
Query: 437 LVFEKVSALDRALQLS 484
DR LQ+S
Sbjct: 322 ASLNGYRLGDRVLQVS 337
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 29.9 bits (64), Expect = 8.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 257 GRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAY 436
G IF+ N+ P ADE L F G +++VK+ NT + F++ +A
Sbjct: 303 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 362
Query: 437 LVFEKVSALDRALQLS 484
DR LQ+S
Sbjct: 363 ASLNGYRLGDRVLQVS 378
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 29.9 bits (64), Expect = 8.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 257 GRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAY 436
G IF+ N+ P ADE L F G +++VK+ NT + F++ +A
Sbjct: 275 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 334
Query: 437 LVFEKVSALDRALQLS 484
DR LQ+S
Sbjct: 335 ASLNGYRLGDRVLQVS 350
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 257 GRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAY 436
G IF+ N+ P ADE L F G +++VK+ NT + F++ +A
Sbjct: 262 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 321
Query: 437 LVFEKVSALDRALQLS 484
DR LQ+S
Sbjct: 322 ASLNGYRLGDRVLQVS 337
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 254 AGRTIFIVNVPPYADEKGLTNAFSEAGPI 340
AG T+F+ +PP A + L FS+ GP+
Sbjct: 2 AGLTLFVGRLPPSARSEQLGELFSQVGPV 30
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 29.9 bits (64), Expect = 8.0
Identities = 22/76 (28%), Positives = 33/76 (43%)
Frame = +2
Query: 257 GRTIFIVNVPPYADEKGLTNAFSEAGPISSVKLCIKPNTMEDDIPKFISEKQKKSFQVAY 436
G IF+ N+ P ADE L F G +++VK+ NT + F++ +A
Sbjct: 283 GWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 342
Query: 437 LVFEKVSALDRALQLS 484
DR LQ+S
Sbjct: 343 ASLNGYRLGDRVLQVS 358
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,523,807
Number of Sequences: 237096
Number of extensions: 1660382
Number of successful extensions: 7439
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 7215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7423
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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