Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30m23
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    29   0.16 
AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450 pr...    25   2.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   2.7  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   6.2  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 13/54 (24%), Positives = 23/54 (42%)
 Frame = -1

Query: 303 KCVEEVEGLVVEHSLKEWRRTRPRLEQSMVSRKNDSGTGTSCGDESSRNVDRSH 142
           +CV+E+E       L +WR+   +        K +  +G S    S   + +SH
Sbjct: 484 RCVDEIEA--ASQKLHQWRQAMDKFADRPAREKTEPASGASSRRRSKSFLSKSH 535


>AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 616 EYRNGEDDVFPEDDECQVSGWLRTGGQKVQV 524
           +Y N ++DVFPE    +   +L   GQ+ Q+
Sbjct: 53  DYINHQEDVFPEPHTFRPERFLSDDGQQQQL 83


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 280 PFNFLNTFANEL-GGMELITSPIKERKTILRGGSYDFSAYRSYQKRHHRMTNFKFD 444
           P N   T+  EL   ++  T  I E++     G  DF+         HRMT F FD
Sbjct: 319 PNNNKATYEKELIASVQFHTCAITEKEVQFTKGDVDFACEDERFSAEHRMT-FCFD 373


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -1

Query: 246 RTRP-RLEQSMVSRKNDSGTGTSCGDESSRNVDRSHIGVDEDLG 118
           R RP R + +   +K+D G     G E   N +R   G D D G
Sbjct: 522 RHRPTRRKSTKRGKKDDKGYDRRSGKEERSNDNRYTNGADRDRG 565


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 260  RLCSTTNPSTSSTHLQMNLEAWNSLHHRSK 349
            RL    NP T  TH+  + + W+++   +K
Sbjct: 986  RLMDGVNPDTLLTHMLQSQQNWSNVCEAAK 1015


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,767
Number of Sequences: 2352
Number of extensions: 14064
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)