Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc30m22
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   2.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   2.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   2.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    23   2.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    23   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   3.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   3.4  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 409 EVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 552
           E K E   +  DP+D       G   HV ++IG    E  ++ V+ +P
Sbjct: 285 EKKPEGAFLCEDPVDLLES---GRYNHVPIMIGYTTREGILSEVLQRP 329


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 409 EVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 552
           E K E   +  DP+D       G   HV ++IG    E  ++ V+ +P
Sbjct: 285 EKKPEGAFLCEDPVDLLES---GRYNHVPIMIGYTTREGILSEVLQRP 329


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 409 EVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 552
           E K E   +  DP+D       G   HV ++IG    E  ++ V+ +P
Sbjct: 285 EKKPEGAFLCEDPVDLLES---GRYNHVPIMIGYTTREGILSEVLQRP 329


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 409 EVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 552
           E K E   +  DP+D       G   HV ++IG    E  ++ V+ +P
Sbjct: 285 EKKPEGAFLCEDPVDLLES---GRYNHVPIMIGYTTREGILSEVLQRP 329


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 409 EVKEEDIVVWVDPLDGTSEYTQGFLEHVTVLIGIAVNETPVAGVIHQP 552
           E K E   +  DP+D       G   HV ++IG    E  ++ V+ +P
Sbjct: 284 EKKPEGAFLCEDPVDLLES---GRYNHVPIMIGYTTREGILSEVLQRP 328


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 436 WVDPLDGTSEYTQGFLEH 489
           WV P DG S  T+  +E+
Sbjct: 916 WVAPFDGNSPITRYMIEY 933


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 EILKLQCPPNLQEVKEEDIVVWVD 444
           E  + QC P L   +E  + +W D
Sbjct: 118 EASRYQCSPGLAYDREARVCMWAD 141


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 373 EILKLQCPPNLQEVKEEDIVVWVD 444
           E  + QC P L   +E  + +W D
Sbjct: 118 EASRYQCSPGLAYDREARVCMWAD 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,823
Number of Sequences: 336
Number of extensions: 2610
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)